RNA–Protein interactions for RNA: ENST00000477169.5

SMARCD3-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-210ENST00000477169 Q8N8P6 123 aa11.45□□□□□ -0.58
SMARCD3-210ENST00000477169 UBE2WQ96B02 151 aa11.45□□□□□ -0.58
SMARCD3-210ENST00000477169 GCSHP23434 173 aa11.44□□□□□ -0.58
SMARCD3-210ENST00000477169 AMMECR1LQ6DCA0 310 aa11.44□□□□□ -0.58
SMARCD3-210ENST00000477169 SCO1O75880 301 aa11.43□□□□□ -0.58
SMARCD3-210ENST00000477169 RNASEKQ6P5S7 137 aaKnown RBP11.43□□□□□ -0.58
SMARCD3-210ENST00000477169 MRPL52Q86TS9 123 aaKnown RBP11.43□□□□□ -0.58
SMARCD3-210ENST00000477169 LINC00269Q8N2A0 174 aa11.43□□□□□ -0.58
SMARCD3-210ENST00000477169 NTN5Q8WTR8 489 aaPredicted RBP11.43□□□□□ -0.58
SMARCD3-210ENST00000477169 PRR34Q9NV39 138 aa11.43□□□□□ -0.58
SMARCD3-210ENST00000477169 EPM2AB3EWF7 344 aa11.42□□□□□ -0.58
SMARCD3-210ENST00000477169 ZNF25P17030 456 aaPredicted RBP11.42□□□□□ -0.58
SMARCD3-210ENST00000477169 RAB5AP20339 215 aa11.42□□□□□ -0.58
SMARCD3-210ENST00000477169 IFI27P40305 119 aaPredicted RBP11.42□□□□□ -0.58
SMARCD3-210ENST00000477169 Q0VG73 95 aa11.42□□□□□ -0.58
SMARCD3-210ENST00000477169 CLPSL2Q6UWE3 100 aa11.42□□□□□ -0.58
SMARCD3-210ENST00000477169 TM2D2Q9BX73 214 aa11.42□□□□□ -0.58
SMARCD3-210ENST00000477169 NXT2Q9NPJ8 142 aaKnown RBP11.42□□□□□ -0.58
SMARCD3-210ENST00000477169 IGLV5-52A0A0A0MRZ9 124 aa11.41□□□□□ -0.58
SMARCD3-210ENST00000477169 CRPP02741 224 aa11.41□□□□□ -0.58
SMARCD3-210ENST00000477169 Q8N814 137 aa11.41□□□□□ -0.58
SMARCD3-210ENST00000477169 COLCA2A8K830 154 aa11.4□□□□□ -0.58
SMARCD3-210ENST00000477169 RPL39P62891 51 aaKnown RBP11.4□□□□□ -0.58
SMARCD3-210ENST00000477169 REG3AQ06141 175 aa11.4□□□□□ -0.58
SMARCD3-210ENST00000477169 TMEM18Q96B42 140 aa11.4□□□□□ -0.58
SMARCD3-210ENST00000477169 TMEM101Q96IK0 257 aa11.4□□□□□ -0.58
SMARCD3-210ENST00000477169 UBE2D4Q9Y2X8 147 aa11.4□□□□□ -0.58
SMARCD3-210ENST00000477169 IGKV2D-24A0A075B6R9 120 aa11.39□□□□□ -0.59
SMARCD3-210ENST00000477169 FAT1Q14517 4588 aa11.39□□□□□ -0.59
SMARCD3-210ENST00000477169 MIAQ16674 131 aa11.39□□□□□ -0.59
SMARCD3-210ENST00000477169 OR5A1Q8NGJ0 315 aa11.39□□□□□ -0.59
SMARCD3-210ENST00000477169 RMI2Q96E14 147 aa11.39□□□□□ -0.59
SMARCD3-210ENST00000477169 TIMM21Q9BVV7 248 aa11.39□□□□□ -0.59
SMARCD3-210ENST00000477169 K7EMI3 77 aa11.38□□□□□ -0.59
SMARCD3-210ENST00000477169 SMAGPQ0VAQ4 97 aa11.38□□□□□ -0.59
SMARCD3-210ENST00000477169 PRSS3P2Q8NHM4 247 aa11.38□□□□□ -0.59
SMARCD3-210ENST00000477169 CSDC2Q9Y534 153 aaKnown RBP11.38□□□□□ -0.59
SMARCD3-210ENST00000477169 LINC01546A6NGU7 62 aa11.37□□□□□ -0.59
SMARCD3-210ENST00000477169 ATP6V1G1O75348 118 aa11.37□□□□□ -0.59
SMARCD3-210ENST00000477169 ORMDL2Q53FV1 153 aa11.37□□□□□ -0.59
SMARCD3-210ENST00000477169 C18orf32Q8TCD1 76 aa11.37□□□□□ -0.59
SMARCD3-210ENST00000477169 C1orf43Q9BWL3 253 aa11.37□□□□□ -0.59
SMARCD3-210ENST00000477169 CDC42SE2Q9NRR3 84 aa11.37□□□□□ -0.59
SMARCD3-210ENST00000477169 COX11Q9Y6N1 276 aa11.37□□□□□ -0.59
SMARCD3-210ENST00000477169 S100A1P23297 94 aa11.36□□□□□ -0.59
SMARCD3-210ENST00000477169 DGAT2L7PQ6IED9 249 aa11.36□□□□□ -0.59
SMARCD3-210ENST00000477169 ZNF664Q8N3J9 261 aa11.36□□□□□ -0.59
SMARCD3-210ENST00000477169 KRTAP26-1Q6PEX3 210 aa11.35□□□□□ -0.59
SMARCD3-210ENST00000477169 FAM104AQ969W3 186 aa11.35□□□□□ -0.59
SMARCD3-210ENST00000477169 SPANXA1Q9NS26 97 aa11.35□□□□□ -0.59
SMARCD3-210ENST00000477169 VPS13BQ7Z7G8 4022 aa11.34□□□□□ -0.59
SMARCD3-210ENST00000477169 IGLV10-54A0A075B6I4 117 aa11.34□□□□□ -0.59
SMARCD3-210ENST00000477169 TRAV8-4A0A0B4J246 113 aa11.34□□□□□ -0.59
SMARCD3-210ENST00000477169 IGKV3OR2-268A0A0C4DH90 116 aa11.34□□□□□ -0.59
SMARCD3-210ENST00000477169 TRGC2P03986 189 aa11.34□□□□□ -0.59
SMARCD3-210ENST00000477169 Q5VSD8 79 aa11.34□□□□□ -0.59
SMARCD3-210ENST00000477169 C2orf66Q6UXQ4 117 aa11.34□□□□□ -0.59
SMARCD3-210ENST00000477169 Q6ZUT4 128 aa11.34□□□□□ -0.59
SMARCD3-210ENST00000477169 FA2HQ7L5A8 372 aa11.34□□□□□ -0.59
SMARCD3-210ENST00000477169 CYSLTR1Q9Y271 337 aa11.34□□□□□ -0.59
SMARCD3-210ENST00000477169 DNAH8Q96JB1 4490 aa11.34□□□□□ -0.59
SMARCD3-210ENST00000477169 RNASE13Q5GAN3 156 aaKnown RBP11.33□□□□□ -0.6
SMARCD3-210ENST00000477169 URB1-AS1Q96HZ7 61 aa11.33□□□□□ -0.6
SMARCD3-210ENST00000477169 PYGO1Q9Y3Y4 419 aa11.33□□□□□ -0.6
SMARCD3-210ENST00000477169 INAFM2P0DMQ5 153 aa11.32□□□□□ -0.6
SMARCD3-210ENST00000477169 MRPS36P82909 103 aaKnown RBP11.32□□□□□ -0.6
SMARCD3-210ENST00000477169 WFDC2Q14508 124 aa11.32□□□□□ -0.6
SMARCD3-210ENST00000477169 OPRPNQ99935 248 aaPredicted RBP11.32□□□□□ -0.6
SMARCD3-210ENST00000477169 LINC00959A0A1B0GUT2 108 aa11.31□□□□□ -0.6
SMARCD3-210ENST00000477169 SMR3BP02814 79 aaPredicted RBP11.31□□□□□ -0.6
SMARCD3-210ENST00000477169 G0S2P27469 103 aa11.31□□□□□ -0.6
SMARCD3-210ENST00000477169 BAALCQ8WXS3 180 aa11.31□□□□□ -0.6
SMARCD3-210ENST00000477169 FAM229AH3BQW9 127 aa11.3□□□□□ -0.6
SMARCD3-210ENST00000477169 LINC00614P0C842 121 aa11.3□□□□□ -0.6
SMARCD3-210ENST00000477169 TOMM6Q96B49 74 aa11.3□□□□□ -0.6
SMARCD3-210ENST00000477169 AP5S1Q9NUS5 200 aa11.3□□□□□ -0.6
SMARCD3-210ENST00000477169 IGLV4-3A0A075B6K6 122 aa11.29□□□□□ -0.6
SMARCD3-210ENST00000477169 IGIPA6NJ69 53 aa11.29□□□□□ -0.6
SMARCD3-210ENST00000477169 LECT2O14960 151 aa11.29□□□□□ -0.6
SMARCD3-210ENST00000477169 CHCHD10Q8WYQ3 142 aaPredicted RBP11.29□□□□□ -0.6
SMARCD3-210ENST00000477169 FAM30AQ9NZY2 134 aa11.29□□□□□ -0.6
SMARCD3-210ENST00000477169 RAB5BP61020 215 aa11.28□□□□□ -0.6
SMARCD3-210ENST00000477169 HAMPP81172 84 aa11.28□□□□□ -0.6
SMARCD3-210ENST00000477169 GAGE12HA6NDE8 117 aa11.27□□□□□ -0.61
SMARCD3-210ENST00000477169 CCL25O15444 150 aa11.27□□□□□ -0.61
SMARCD3-210ENST00000477169 SS18Q15532 418 aa11.27□□□□□ -0.61
SMARCD3-210ENST00000477169 TMEM141Q96I45 108 aa11.27□□□□□ -0.61
SMARCD3-210ENST00000477169 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.26□□□□□ -0.61
SMARCD3-210ENST00000477169 A0A096LNJ9 63 aa11.26□□□□□ -0.61
SMARCD3-210ENST00000477169 TRAV13-1A0A0B4J241 112 aa11.26□□□□□ -0.61
SMARCD3-210ENST00000477169 NPSP0C0P6 89 aa11.26□□□□□ -0.61
SMARCD3-210ENST00000477169 XCL1P47992 114 aa11.26□□□□□ -0.61
SMARCD3-210ENST00000477169 HERC1Q15751 4861 aa11.25□□□□□ -0.61
SMARCD3-210ENST00000477169 LINC01549A6NIU2 74 aa11.25□□□□□ -0.61
SMARCD3-210ENST00000477169 C1orf196B1AJZ1 125 aa11.25□□□□□ -0.61
SMARCD3-210ENST00000477169 FOXI1Q12951 378 aa11.25□□□□□ -0.61
SMARCD3-210ENST00000477169 Q6ZSA8 131 aa11.25□□□□□ -0.61
SMARCD3-210ENST00000477169 ERASQ7Z444 233 aa11.25□□□□□ -0.61
SMARCD3-210ENST00000477169 SCGB3A1Q96QR1 104 aa11.25□□□□□ -0.61
SMARCD3-210ENST00000477169 TIMM17AQ99595 171 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms