RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 NKX2-5P52952 324 aaPredicted RBP4.64□□□□□ -1.67
BRCA1-214ENST00000477152 CCL20P78556 96 aa4.64□□□□□ -1.67
BRCA1-214ENST00000477152 CIRBPQ14011 172 aaKnown RBP4.64□□□□□ -1.67
BRCA1-214ENST00000477152 C11orf52Q96A22 123 aa4.64□□□□□ -1.67
BRCA1-214ENST00000477152 BTF3L4Q96K17 158 aa4.64□□□□□ -1.67
BRCA1-214ENST00000477152 GNG13Q9P2W3 67 aa4.64□□□□□ -1.67
BRCA1-214ENST00000477152 RPS10P46783 165 aaKnown RBP4.63□□□□□ -1.67
BRCA1-214ENST00000477152 SMAGPQ0VAQ4 97 aa4.63□□□□□ -1.67
BRCA1-214ENST00000477152 CENPWQ5EE01 88 aa4.63□□□□□ -1.67
BRCA1-214ENST00000477152 C20orf203Q8NBC4 194 aa4.63□□□□□ -1.67
BRCA1-214ENST00000477152 DNAH8Q96JB1 4490 aa4.63□□□□□ -1.67
BRCA1-214ENST00000477152 TRAV1-1A0A0B4J248 108 aa4.62□□□□□ -1.67
BRCA1-214ENST00000477152 NDUFS6O75380 124 aaKnown RBP4.62□□□□□ -1.67
BRCA1-214ENST00000477152 IGLC6P0CF74 106 aa4.62□□□□□ -1.67
BRCA1-214ENST00000477152 RPL24P83731 157 aaKnown RBP4.62□□□□□ -1.67
BRCA1-214ENST00000477152 LBHQ53QV2 105 aaPredicted RBP4.62□□□□□ -1.67
BRCA1-214ENST00000477152 KRTAP26-1Q6PEX3 210 aa4.62□□□□□ -1.67
BRCA1-214ENST00000477152 TMEM101Q96IK0 257 aa4.62□□□□□ -1.67
BRCA1-214ENST00000477152 A0A087WYN8 130 aa4.62□□□□□ -1.67
BRCA1-214ENST00000477152 ZNF25P17030 456 aaPredicted RBP4.62□□□□□ -1.67
BRCA1-214ENST00000477152 NTF3P20783 257 aa4.62□□□□□ -1.67
BRCA1-214ENST00000477152 REG3GQ6UW15 175 aa4.62□□□□□ -1.67
BRCA1-214ENST00000477152 SPACA4Q8TDM5 124 aa4.62□□□□□ -1.67
BRCA1-214ENST00000477152 BORCS7Q96B45 105 aa4.62□□□□□ -1.67
BRCA1-214ENST00000477152 MED9Q9NWA0 146 aa4.62□□□□□ -1.67
BRCA1-214ENST00000477152 APCSP02743 223 aa4.61□□□□□ -1.67
BRCA1-214ENST00000477152 MEF2BQ02080 365 aaPredicted RBP4.61□□□□□ -1.67
BRCA1-214ENST00000477152 RNASEKQ6P5S7 137 aaKnown RBP4.61□□□□□ -1.67
BRCA1-214ENST00000477152 LYZL1Q6UWQ5 148 aa4.61□□□□□ -1.67
BRCA1-214ENST00000477152 GTSF1Q8WW33 167 aa4.61□□□□□ -1.67
BRCA1-214ENST00000477152 PLAC8Q9NZF1 115 aa4.61□□□□□ -1.67
BRCA1-214ENST00000477152 IGLV4-60A0A075B6I1 120 aa4.6□□□□□ -1.67
BRCA1-214ENST00000477152 C19orf71A6NCJ1 209 aa4.6□□□□□ -1.67
BRCA1-214ENST00000477152 MAJINQ3KP22 176 aa4.6□□□□□ -1.67
BRCA1-214ENST00000477152 C9orf62Q8N4C0 152 aa4.6□□□□□ -1.67
BRCA1-214ENST00000477152 ISOC2Q96AB3 205 aa4.6□□□□□ -1.67
BRCA1-214ENST00000477152 IGKV3OR2-268A0A0C4DH90 116 aa4.6□□□□□ -1.67
BRCA1-214ENST00000477152 SS18Q15532 418 aa4.6□□□□□ -1.67
BRCA1-214ENST00000477152 Q8N9P0 234 aaPredicted RBP4.6□□□□□ -1.67
BRCA1-214ENST00000477152 IGHV1-58A0A0C4DH39 117 aa4.59□□□□□ -1.67
BRCA1-214ENST00000477152 G3V3Q6 166 aa4.59□□□□□ -1.67
BRCA1-214ENST00000477152 PHOX2AO14813 284 aa4.59□□□□□ -1.67
BRCA1-214ENST00000477152 PMCHP20382 165 aa4.59□□□□□ -1.67
BRCA1-214ENST00000477152 CTRLP40313 264 aa4.59□□□□□ -1.67
BRCA1-214ENST00000477152 COX6A2Q02221 97 aa4.59□□□□□ -1.67
BRCA1-214ENST00000477152 PET117Q6UWS5 81 aa4.59□□□□□ -1.67
BRCA1-214ENST00000477152 STPG4Q8N801 248 aa4.59□□□□□ -1.67
BRCA1-214ENST00000477152 CHCHD10Q8WYQ3 142 aaPredicted RBP4.59□□□□□ -1.67
BRCA1-214ENST00000477152 RPP21Q9H633 154 aaKnown RBP4.59□□□□□ -1.67
BRCA1-214ENST00000477152 GVQW2A0A096LPI5 108 aaPredicted RBP4.58□□□□□ -1.68
BRCA1-214ENST00000477152 RAB19A4D1S5 217 aa4.58□□□□□ -1.68
BRCA1-214ENST00000477152 I3L3M4 83 aa4.58□□□□□ -1.68
BRCA1-214ENST00000477152 CCL25O15444 150 aa4.58□□□□□ -1.68
BRCA1-214ENST00000477152 HNRNPA3P51991 378 aaKnown RBP4.58□□□□□ -1.68
BRCA1-214ENST00000477152 SPINK6Q6UWN8 80 aa4.58□□□□□ -1.68
BRCA1-214ENST00000477152 OR5A1Q8NGJ0 315 aa4.58□□□□□ -1.68
BRCA1-214ENST00000477152 CNFNQ9BYD5 112 aa4.58□□□□□ -1.68
BRCA1-214ENST00000477152 IGKV2-24A0A0C4DH68 120 aa4.58□□□□□ -1.68
BRCA1-214ENST00000477152 A8MWL6 223 aa4.58□□□□□ -1.68
BRCA1-214ENST00000477152 SMLR1H3BR10 107 aa4.58□□□□□ -1.68
BRCA1-214ENST00000477152 CHTF8P0CG12 524 aa4.58□□□□□ -1.68
BRCA1-214ENST00000477152 BCL2P10415 239 aa4.58□□□□□ -1.68
BRCA1-214ENST00000477152 HIGD2BQ4VC39 106 aa4.58□□□□□ -1.68
BRCA1-214ENST00000477152 OCC1Q8TAD7 63 aa4.58□□□□□ -1.68
BRCA1-214ENST00000477152 LINC01600Q96MT4 127 aa4.58□□□□□ -1.68
BRCA1-214ENST00000477152 A4D1N5 150 aa4.57□□□□□ -1.68
BRCA1-214ENST00000477152 PANO1I0J062 215 aa4.57□□□□□ -1.68
BRCA1-214ENST00000477152 PPP1R17O96001 155 aa4.57□□□□□ -1.68
BRCA1-214ENST00000477152 FGF6P10767 208 aa4.57□□□□□ -1.68
BRCA1-214ENST00000477152 Q6ZRP5 223 aa4.57□□□□□ -1.68
BRCA1-214ENST00000477152 C15orf56Q8N910 161 aa4.57□□□□□ -1.68
BRCA1-214ENST00000477152 GATD1Q8NB37 220 aa4.57□□□□□ -1.68
BRCA1-214ENST00000477152 MRAP2Q96G30 205 aa4.57□□□□□ -1.68
BRCA1-214ENST00000477152 CARD19Q96LW7 228 aa4.57□□□□□ -1.68
BRCA1-214ENST00000477152 SDHAF1A6NFY7 115 aa4.56□□□□□ -1.68
BRCA1-214ENST00000477152 GATCO43716 136 aaKnown RBP4.56□□□□□ -1.68
BRCA1-214ENST00000477152 PRR3P79522 188 aaKnown RBP4.56□□□□□ -1.68
BRCA1-214ENST00000477152 ST20Q9HBF5 79 aa4.56□□□□□ -1.68
BRCA1-214ENST00000477152 APOMO95445 188 aa4.56□□□□□ -1.68
BRCA1-214ENST00000477152 MT1HL1P0DM35 61 aa4.56□□□□□ -1.68
BRCA1-214ENST00000477152 SLC51BQ86UW2 128 aa4.56□□□□□ -1.68
BRCA1-214ENST00000477152 LYPD6BQ8NI32 183 aa4.56□□□□□ -1.68
BRCA1-214ENST00000477152 TSKUQ8WUA8 353 aa4.56□□□□□ -1.68
BRCA1-214ENST00000477152 GFRA4Q9GZZ7 299 aa4.56□□□□□ -1.68
BRCA1-214ENST00000477152 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.55□□□□□ -1.68
BRCA1-214ENST00000477152 TRBV6-5A0A0K0K1A5 114 aa4.55□□□□□ -1.68
BRCA1-214ENST00000477152 LOC107984640A0A0U1RRK4 108 aa4.55□□□□□ -1.68
BRCA1-214ENST00000477152 IGKV2-29A2NJV5 120 aaPredicted RBP4.55□□□□□ -1.68
BRCA1-214ENST00000477152 XCL1P47992 114 aa4.55□□□□□ -1.68
BRCA1-214ENST00000477152 SYCNQ0VAF6 134 aa4.55□□□□□ -1.68
BRCA1-214ENST00000477152 CD164L2Q6UWJ8 174 aa4.55□□□□□ -1.68
BRCA1-214ENST00000477152 IGLV5-45A0A087WSX0 123 aa4.54□□□□□ -1.68
BRCA1-214ENST00000477152 A0A0J9YXV3 536 aa4.54□□□□□ -1.68
BRCA1-214ENST00000477152 LINC00959A0A1B0GUT2 108 aa4.54□□□□□ -1.68
BRCA1-214ENST00000477152 C1orf196B1AJZ1 125 aa4.54□□□□□ -1.68
BRCA1-214ENST00000477152 TMEM250H0YL14 139 aa4.54□□□□□ -1.68
BRCA1-214ENST00000477152 TCAPO15273 167 aa4.54□□□□□ -1.68
BRCA1-214ENST00000477152 FCER1GP30273 86 aa4.54□□□□□ -1.68
BRCA1-214ENST00000477152 FAM231DQ6ZW35 169 aa4.54□□□□□ -1.68
BRCA1-214ENST00000477152 A0A096LNI7 61 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms