RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 KRTAP1-5Q9BYS1 174 aa11.91□□□□□ -0.5
SREBF1-211ENST00000476994 IGIPA6NJ69 53 aa11.9□□□□□ -0.5
SREBF1-211ENST00000476994 BTF3P20290 206 aaKnown RBP11.9□□□□□ -0.5
SREBF1-211ENST00000476994 NDUFA6P56556 154 aa11.9□□□□□ -0.5
SREBF1-211ENST00000476994 PDZD11Q5EBL8 140 aa11.9□□□□□ -0.5
SREBF1-211ENST00000476994 TMEM18Q96B42 140 aa11.9□□□□□ -0.5
SREBF1-211ENST00000476994 PYGO1Q9Y3Y4 419 aa11.9□□□□□ -0.5
SREBF1-211ENST00000476994 CSDC2Q9Y534 153 aaKnown RBP11.9□□□□□ -0.5
SREBF1-211ENST00000476994 PKD1P98161 4303 aa11.9□□□□□ -0.51
SREBF1-211ENST00000476994 TMEM262E9PQX1 116 aa11.89□□□□□ -0.51
SREBF1-211ENST00000476994 HSBP1O75506 76 aa11.89□□□□□ -0.51
SREBF1-211ENST00000476994 IGHV3-30P01768 117 aa11.89□□□□□ -0.51
SREBF1-211ENST00000476994 IGHV3-33P01772 117 aa11.89□□□□□ -0.51
SREBF1-211ENST00000476994 HBDP02042 147 aa11.89□□□□□ -0.51
SREBF1-211ENST00000476994 IGHV3-30-3P0DP02 117 aa11.89□□□□□ -0.51
SREBF1-211ENST00000476994 IGHV3-30-5P0DP03 117 aa11.89□□□□□ -0.51
SREBF1-211ENST00000476994 ZNF25P17030 456 aaPredicted RBP11.89□□□□□ -0.51
SREBF1-211ENST00000476994 FAM19A2Q8N3H0 131 aa11.89□□□□□ -0.51
SREBF1-211ENST00000476994 SPANXA1Q9NS26 97 aa11.89□□□□□ -0.51
SREBF1-211ENST00000476994 PCLOQ9Y6V0 5065 aa11.88□□□□□ -0.51
SREBF1-211ENST00000476994 A0A087WX48 190 aa11.88□□□□□ -0.51
SREBF1-211ENST00000476994 NBDYA0A0U1RRE5 68 aa11.88□□□□□ -0.51
SREBF1-211ENST00000476994 G0S2P27469 103 aa11.87□□□□□ -0.51
SREBF1-211ENST00000476994 AMMECR1LQ6DCA0 310 aa11.87□□□□□ -0.51
SREBF1-211ENST00000476994 Q6ZUT4 128 aa11.87□□□□□ -0.51
SREBF1-211ENST00000476994 C6orf223Q8N319 242 aa11.87□□□□□ -0.51
SREBF1-211ENST00000476994 TIMM17AQ99595 171 aa11.87□□□□□ -0.51
SREBF1-211ENST00000476994 OPRPNQ99935 248 aaPredicted RBP11.87□□□□□ -0.51
SREBF1-211ENST00000476994 CDC42SE2Q9NRR3 84 aa11.87□□□□□ -0.51
SREBF1-211ENST00000476994 DNAH11Q96DT5 4516 aa11.87□□□□□ -0.51
SREBF1-211ENST00000476994 IGLV4-3A0A075B6K6 122 aa11.86□□□□□ -0.51
SREBF1-211ENST00000476994 LINC01549A6NIU2 74 aa11.86□□□□□ -0.51
SREBF1-211ENST00000476994 MRPS36P82909 103 aaKnown RBP11.86□□□□□ -0.51
SREBF1-211ENST00000476994 C16orf90A8MZG2 172 aa11.85□□□□□ -0.51
SREBF1-211ENST00000476994 NPSP0C0P6 89 aa11.85□□□□□ -0.51
SREBF1-211ENST00000476994 ERASQ7Z444 233 aa11.85□□□□□ -0.51
SREBF1-211ENST00000476994 OR5A1Q8NGJ0 315 aa11.85□□□□□ -0.51
SREBF1-211ENST00000476994 PRR34Q9NV39 138 aa11.85□□□□□ -0.51
SREBF1-211ENST00000476994 DYNC1H1Q14204 4646 aaKnown RBP11.85□□□□□ -0.51
SREBF1-211ENST00000476994 IBA57-AS1B1ANH7 110 aa11.84□□□□□ -0.51
SREBF1-211ENST00000476994 K7EP13 123 aa11.84□□□□□ -0.51
SREBF1-211ENST00000476994 SMAGPQ0VAQ4 97 aa11.84□□□□□ -0.51
SREBF1-211ENST00000476994 LINC00173Q6ZV60 143 aa11.84□□□□□ -0.51
SREBF1-211ENST00000476994 ZNF664Q8N3J9 261 aa11.84□□□□□ -0.51
SREBF1-211ENST00000476994 KLK12Q9UKR0 248 aa11.84□□□□□ -0.51
SREBF1-211ENST00000476994 ANGP03950 147 aaKnown RBP11.83□□□□□ -0.52
SREBF1-211ENST00000476994 TTC32Q5I0X7 151 aa11.83□□□□□ -0.52
SREBF1-211ENST00000476994 ENHOQ6UWT2 76 aa11.83□□□□□ -0.52
SREBF1-211ENST00000476994 C10orf126Q8N4M7 172 aa11.83□□□□□ -0.52
SREBF1-211ENST00000476994 SCGB3A1Q96QR1 104 aa11.83□□□□□ -0.52
SREBF1-211ENST00000476994 AMELXQ99217 191 aa11.83□□□□□ -0.52
SREBF1-211ENST00000476994 TNP2Q05952 138 aa11.82□□□□□ -0.52
SREBF1-211ENST00000476994 RNASE13Q5GAN3 156 aaKnown RBP11.82□□□□□ -0.52
SREBF1-211ENST00000476994 LINC00269Q8N2A0 174 aa11.82□□□□□ -0.52
SREBF1-211ENST00000476994 TMEM141Q96I45 108 aa11.82□□□□□ -0.52
SREBF1-211ENST00000476994 TMEM101Q96IK0 257 aa11.82□□□□□ -0.52
SREBF1-211ENST00000476994 C5orf52A6NGY3 159 aa11.81□□□□□ -0.52
SREBF1-211ENST00000476994 ZC2HC1BQ5TFG8 222 aa11.81□□□□□ -0.52
SREBF1-211ENST00000476994 DGAT2L7PQ6IED9 249 aa11.81□□□□□ -0.52
SREBF1-211ENST00000476994 HIST3H2BBQ8N257 126 aa11.81□□□□□ -0.52
SREBF1-211ENST00000476994 REG3AQ06141 175 aa11.8□□□□□ -0.52
SREBF1-211ENST00000476994 CLPSL2Q6UWE3 100 aa11.8□□□□□ -0.52
SREBF1-211ENST00000476994 BAALCQ8WXS3 180 aa11.8□□□□□ -0.52
SREBF1-211ENST00000476994 TRAV9-2A0A087WT02 112 aa11.79□□□□□ -0.52
SREBF1-211ENST00000476994 IFITM10A6NMD0 228 aa11.79□□□□□ -0.52
SREBF1-211ENST00000476994 ATP5LO75964 103 aa11.79□□□□□ -0.52
SREBF1-211ENST00000476994 LEPROTL1O95214 131 aa11.79□□□□□ -0.52
SREBF1-211ENST00000476994 S100A6P06703 90 aa11.79□□□□□ -0.52
SREBF1-211ENST00000476994 SNRPEP62304 92 aaKnown RBP11.79□□□□□ -0.52
SREBF1-211ENST00000476994 PACRGQ96M98 296 aaPredicted RBP11.79□□□□□ -0.52
SREBF1-211ENST00000476994 RYR1P21817 5038 aa11.78□□□□□ -0.52
SREBF1-211ENST00000476994 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.78□□□□□ -0.52
SREBF1-211ENST00000476994 CDK2AP2O75956 126 aa11.78□□□□□ -0.52
SREBF1-211ENST00000476994 UBE2WQ96B02 151 aa11.78□□□□□ -0.52
SREBF1-211ENST00000476994 IFI27L1Q96BM0 104 aa11.78□□□□□ -0.52
SREBF1-211ENST00000476994 TMA7Q9Y2S6 64 aaKnown RBP11.78□□□□□ -0.52
SREBF1-211ENST00000476994 KRTAP26-1Q6PEX3 210 aa11.77□□□□□ -0.53
SREBF1-211ENST00000476994 LINC00959A0A1B0GUT2 108 aa11.76□□□□□ -0.53
SREBF1-211ENST00000476994 FABP4P15090 132 aa11.76□□□□□ -0.53
SREBF1-211ENST00000476994 MIAQ16674 131 aa11.76□□□□□ -0.53
SREBF1-211ENST00000476994 TEX43Q6ZNM6 134 aa11.76□□□□□ -0.53
SREBF1-211ENST00000476994 TRAV8-3A0A0A6YYJ7 113 aa11.75□□□□□ -0.53
SREBF1-211ENST00000476994 CRPP02741 224 aa11.75□□□□□ -0.53
SREBF1-211ENST00000476994 UBE2D1P51668 147 aa11.75□□□□□ -0.53
SREBF1-211ENST00000476994 PAPPA-AS1Q5QFB9 102 aa11.75□□□□□ -0.53
SREBF1-211ENST00000476994 Q6ZN92 141 aa11.75□□□□□ -0.53
SREBF1-211ENST00000476994 Q6ZRN7 208 aaPredicted RBP11.75□□□□□ -0.53
SREBF1-211ENST00000476994 HIST1H2BLQ99880 126 aa11.75□□□□□ -0.53
SREBF1-211ENST00000476994 VCX2Q9H322 139 aa11.75□□□□□ -0.53
SREBF1-211ENST00000476994 CST9LQ9H4G1 147 aa11.75□□□□□ -0.53
SREBF1-211ENST00000476994 HSPB8Q9UJY1 196 aa11.75□□□□□ -0.53
SREBF1-211ENST00000476994 IGKV3OR2-268A0A0C4DH90 116 aa11.74□□□□□ -0.53
SREBF1-211ENST00000476994 PMVKQ15126 192 aa11.74□□□□□ -0.53
SREBF1-211ENST00000476994 FAM19A3Q7Z5A8 133 aa11.74□□□□□ -0.53
SREBF1-211ENST00000476994 MAPKAPK5-AS1Q8N8E1 139 aa11.74□□□□□ -0.53
SREBF1-211ENST00000476994 Q9HAA7 133 aa11.74□□□□□ -0.53
SREBF1-211ENST00000476994 SPATA12Q7Z6I5 190 aa11.73□□□□□ -0.53
SREBF1-211ENST00000476994 TRAV13-1A0A0B4J241 112 aa11.72□□□□□ -0.53
SREBF1-211ENST00000476994 TRAV12-1A0A0B4J245 112 aa11.72□□□□□ -0.53
SREBF1-211ENST00000476994 TRAV8-4A0A0B4J246 113 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms