RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 MBD3L1Q8WWY6 194 aa6.83□□□□□ -1.32
BRCA1-213ENST00000476777 APOMO95445 188 aa6.82□□□□□ -1.32
BRCA1-213ENST00000476777 LCE1DQ5T752 114 aa6.82□□□□□ -1.32
BRCA1-213ENST00000476777 RPL39LQ96EH5 51 aaKnown RBP6.82□□□□□ -1.32
BRCA1-213ENST00000476777 XKRY2A2RUG3 117 aa6.81□□□□□ -1.32
BRCA1-213ENST00000476777 IFNA1P01562 189 aa6.81□□□□□ -1.32
BRCA1-213ENST00000476777 SS18Q15532 418 aa6.81□□□□□ -1.32
BRCA1-213ENST00000476777 CENPWQ5EE01 88 aa6.81□□□□□ -1.32
BRCA1-213ENST00000476777 KRTAP11-1Q8IUC1 163 aa6.81□□□□□ -1.32
BRCA1-213ENST00000476777 C9orf62Q8N4C0 152 aa6.81□□□□□ -1.32
BRCA1-213ENST00000476777 TMEM101Q96IK0 257 aa6.81□□□□□ -1.32
BRCA1-213ENST00000476777 BTF3L4Q96K17 158 aa6.81□□□□□ -1.32
BRCA1-213ENST00000476777 CNFNQ9BYD5 112 aa6.81□□□□□ -1.32
BRCA1-213ENST00000476777 A0A087WZ39 114 aa6.8□□□□□ -1.32
BRCA1-213ENST00000476777 SDHAF1A6NFY7 115 aa6.8□□□□□ -1.32
BRCA1-213ENST00000476777 CTRLP40313 264 aa6.8□□□□□ -1.32
BRCA1-213ENST00000476777 EIF5AP63241 154 aaKnown RBP6.8□□□□□ -1.32
BRCA1-213ENST00000476777 RPL18AQ02543 176 aaKnown RBP6.8□□□□□ -1.32
BRCA1-213ENST00000476777 TWIST1Q15672 202 aa6.8□□□□□ -1.32
BRCA1-213ENST00000476777 KCNRGQ8N5I3 272 aa6.8□□□□□ -1.32
BRCA1-213ENST00000476777 FAM213BQ8TBF2 198 aa6.8□□□□□ -1.32
BRCA1-213ENST00000476777 C11orf52Q96A22 123 aa6.8□□□□□ -1.32
BRCA1-213ENST00000476777 CAMK2N2Q96S95 79 aa6.8□□□□□ -1.32
BRCA1-213ENST00000476777 CDC42SE2Q9NRR3 84 aa6.8□□□□□ -1.32
BRCA1-213ENST00000476777 TRAV1-1A0A0B4J248 108 aa6.79□□□□□ -1.32
BRCA1-213ENST00000476777 ESDP10768 282 aa6.79□□□□□ -1.32
BRCA1-213ENST00000476777 EIF5AL1Q6IS14 154 aaKnown RBP6.79□□□□□ -1.32
BRCA1-213ENST00000476777 RAB19A4D1S5 217 aa6.78□□□□□ -1.32
BRCA1-213ENST00000476777 G3V3Q6 166 aa6.78□□□□□ -1.32
BRCA1-213ENST00000476777 I3L3M4 83 aa6.78□□□□□ -1.32
BRCA1-213ENST00000476777 COX7A2LO14548 114 aa6.78□□□□□ -1.32
BRCA1-213ENST00000476777 BCL2L11O43521 198 aa6.78□□□□□ -1.32
BRCA1-213ENST00000476777 MALP21145 153 aa6.78□□□□□ -1.32
BRCA1-213ENST00000476777 RPL13AP40429 203 aaKnown RBP6.78□□□□□ -1.32
BRCA1-213ENST00000476777 UBE2D1P51668 147 aa6.78□□□□□ -1.32
BRCA1-213ENST00000476777 MRPL52Q86TS9 123 aaKnown RBP6.78□□□□□ -1.32
BRCA1-213ENST00000476777 C2orf48Q96LS8 159 aa6.78□□□□□ -1.32
BRCA1-213ENST00000476777 OPRPNQ99935 248 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-213ENST00000476777 FSIP2Q5CZC0 6907 aa6.78□□□□□ -1.32
BRCA1-213ENST00000476777 FAM168BA1KXE4 195 aa6.77□□□□□ -1.33
BRCA1-213ENST00000476777 ARPC5O15511 151 aa6.77□□□□□ -1.33
BRCA1-213ENST00000476777 TSHBP01222 138 aa6.77□□□□□ -1.33
BRCA1-213ENST00000476777 PMCHP20382 165 aa6.77□□□□□ -1.33
BRCA1-213ENST00000476777 FOXA3P55318 350 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-213ENST00000476777 SMIM12Q96EX1 92 aa6.77□□□□□ -1.33
BRCA1-213ENST00000476777 C1orf196B1AJZ1 125 aa6.76□□□□□ -1.33
BRCA1-213ENST00000476777 UMAD1C9J7I0 102 aa6.76□□□□□ -1.33
BRCA1-213ENST00000476777 GNG4P50150 75 aa6.76□□□□□ -1.33
BRCA1-213ENST00000476777 CCL20P78556 96 aa6.76□□□□□ -1.33
BRCA1-213ENST00000476777 RNF151Q2KHN1 245 aa6.76□□□□□ -1.33
BRCA1-213ENST00000476777 TEX261Q6UWH6 196 aa6.76□□□□□ -1.33
BRCA1-213ENST00000476777 TSKUQ8WUA8 353 aa6.76□□□□□ -1.33
BRCA1-213ENST00000476777 MRAP2Q96G30 205 aa6.76□□□□□ -1.33
BRCA1-213ENST00000476777 TRBV20OR9-2A0A075B6H5 130 aa6.75□□□□□ -1.33
BRCA1-213ENST00000476777 TRBV6-5A0A0K0K1A5 114 aa6.75□□□□□ -1.33
BRCA1-213ENST00000476777 NUDT10Q8NFP7 164 aa6.75□□□□□ -1.33
BRCA1-213ENST00000476777 NUDT11Q96G61 164 aa6.75□□□□□ -1.33
BRCA1-213ENST00000476777 TMEM242Q9NWH2 141 aa6.75□□□□□ -1.33
BRCA1-213ENST00000476777 CARHSP1Q9Y2V2 147 aaKnown RBP6.75□□□□□ -1.33
BRCA1-213ENST00000476777 TSPAN13O95857 204 aa6.74□□□□□ -1.33
BRCA1-213ENST00000476777 RNASE7Q9H1E1 156 aaKnown RBP6.74□□□□□ -1.33
BRCA1-213ENST00000476777 MANBALQ9NQG1 85 aa6.74□□□□□ -1.33
BRCA1-213ENST00000476777 GNG13Q9P2W3 67 aa6.74□□□□□ -1.33
BRCA1-213ENST00000476777 SPAG11BQ08648 103 aa6.73□□□□□ -1.33
BRCA1-213ENST00000476777 SMIM15Q7Z3B0 74 aa6.73□□□□□ -1.33
BRCA1-213ENST00000476777 FAM19A5Q7Z5A7 132 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-213ENST00000476777 C5orf38Q86SI9 138 aa6.73□□□□□ -1.33
BRCA1-213ENST00000476777 KRTAP7-1Q8IUC3 87 aa6.73□□□□□ -1.33
BRCA1-213ENST00000476777 FAM210AQ96ND0 272 aa6.73□□□□□ -1.33
BRCA1-213ENST00000476777 BIN3Q9NQY0 253 aa6.73□□□□□ -1.33
BRCA1-213ENST00000476777 MRPL35Q9NZE8 188 aaKnown RBP6.73□□□□□ -1.33
BRCA1-213ENST00000476777 TRAV13-1A0A0B4J241 112 aa6.72□□□□□ -1.33
BRCA1-213ENST00000476777 C7orf77A4D0Y5 90 aa6.72□□□□□ -1.33
BRCA1-213ENST00000476777 POLR2KP53803 58 aaKnown RBP6.72□□□□□ -1.33
BRCA1-213ENST00000476777 IMMP2LQ96T52 175 aa6.72□□□□□ -1.33
BRCA1-213ENST00000476777 RPP21Q9H633 154 aaKnown RBP6.72□□□□□ -1.33
BRCA1-213ENST00000476777 ST20Q9HBF5 79 aa6.72□□□□□ -1.33
BRCA1-213ENST00000476777 MUC17Q685J3 4493 aa6.71□□□□□ -1.33
BRCA1-213ENST00000476777 TRBV27A0A0K0K1C4 114 aa6.71□□□□□ -1.34
BRCA1-213ENST00000476777 TLX1NBP0CAT3 122 aa6.71□□□□□ -1.34
BRCA1-213ENST00000476777 RNASE13Q5GAN3 156 aaKnown RBP6.71□□□□□ -1.34
BRCA1-213ENST00000476777 CSDC2Q9Y534 153 aaKnown RBP6.71□□□□□ -1.34
BRCA1-213ENST00000476777 C10orf25Q5T742 122 aa6.7□□□□□ -1.34
BRCA1-213ENST00000476777 OR10D4PQ8NGN7 298 aa6.7□□□□□ -1.34
BRCA1-213ENST00000476777 MRPL18Q9H0U6 180 aaKnown RBP6.7□□□□□ -1.34
BRCA1-213ENST00000476777 MED9Q9NWA0 146 aa6.7□□□□□ -1.34
BRCA1-213ENST00000476777 F8WDY8 70 aa6.69□□□□□ -1.34
BRCA1-213ENST00000476777 SMLR1H3BR10 107 aa6.69□□□□□ -1.34
BRCA1-213ENST00000476777 M0QXV9 152 aa6.69□□□□□ -1.34
BRCA1-213ENST00000476777 PDE6DO43924 150 aa6.69□□□□□ -1.34
BRCA1-213ENST00000476777 UBE2BP63146 152 aa6.69□□□□□ -1.34
BRCA1-213ENST00000476777 ZNF345Q14585 488 aa6.69□□□□□ -1.34
BRCA1-213ENST00000476777 GAGE2EQ4V326 116 aa6.69□□□□□ -1.34
BRCA1-213ENST00000476777 C6orf48Q9UBA6 75 aa6.69□□□□□ -1.34
BRCA1-213ENST00000476777 GAGE2DQ9UEU5 116 aa6.69□□□□□ -1.34
BRCA1-213ENST00000476777 UBE2D4Q9Y2X8 147 aa6.69□□□□□ -1.34
BRCA1-213ENST00000476777 K7EN84 100 aa6.68□□□□□ -1.34
BRCA1-213ENST00000476777 NDUFA1O15239 70 aa6.68□□□□□ -1.34
BRCA1-213ENST00000476777 ZNF861PO60384 105 aa6.68□□□□□ -1.34
BRCA1-213ENST00000476777 TMEM241Q24JQ0 296 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms