RNA–Protein interactions for RNA: ENST00000476517.1

CDKAL1-203, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 2

Gene CDKAL1, Length 840 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-203ENST00000476517 VCX2Q9H322 139 aa8.71□□□□□ -1.02
CDKAL1-203ENST00000476517 UQCR10Q9UDW1 63 aa8.71□□□□□ -1.02
CDKAL1-203ENST00000476517 UBE2D4Q9Y2X8 147 aa8.71□□□□□ -1.02
CDKAL1-203ENST00000476517 IGLV4-3A0A075B6K6 122 aa8.7□□□□□ -1.02
CDKAL1-203ENST00000476517 PRSS29PA6NIE9 313 aa8.7□□□□□ -1.02
CDKAL1-203ENST00000476517 PRB2P02812 416 aaPredicted RBP8.7□□□□□ -1.02
CDKAL1-203ENST00000476517 HTN3P15516 51 aa8.7□□□□□ -1.02
CDKAL1-203ENST00000476517 SH2D6Q7Z4S9 175 aa8.7□□□□□ -1.02
CDKAL1-203ENST00000476517 ATP6V0E2Q8NHE4 81 aa8.7□□□□□ -1.02
CDKAL1-203ENST00000476517 TM2D3Q9BRN9 247 aa8.7□□□□□ -1.02
CDKAL1-203ENST00000476517 CST9LQ9H4G1 147 aa8.7□□□□□ -1.02
CDKAL1-203ENST00000476517 TRAV26-1A0A087WT03 109 aa8.69□□□□□ -1.02
CDKAL1-203ENST00000476517 MRPS36P82909 103 aaKnown RBP8.69□□□□□ -1.02
CDKAL1-203ENST00000476517 AMMECR1LQ6DCA0 310 aa8.69□□□□□ -1.02
CDKAL1-203ENST00000476517 SBSPONQ8IVN8 264 aa8.69□□□□□ -1.02
CDKAL1-203ENST00000476517 TMEM101Q96IK0 257 aa8.69□□□□□ -1.02
CDKAL1-203ENST00000476517 MIEN1Q9BRT3 115 aa8.69□□□□□ -1.02
CDKAL1-203ENST00000476517 COL7A1Q02388 2944 aa8.68□□□□□ -1.02
CDKAL1-203ENST00000476517 TRBV6-8A0A0A6YYG3 113 aa8.68□□□□□ -1.02
CDKAL1-203ENST00000476517 A0A0J9YWU9 116 aa8.68□□□□□ -1.02
CDKAL1-203ENST00000476517 IGLC3P0DOY3 106 aa8.68□□□□□ -1.02
CDKAL1-203ENST00000476517 ZNF25P17030 456 aaPredicted RBP8.68□□□□□ -1.02
CDKAL1-203ENST00000476517 HERVK_113P61574 105 aa8.68□□□□□ -1.02
CDKAL1-203ENST00000476517 MRPL23Q16540 153 aaKnown RBP8.68□□□□□ -1.02
CDKAL1-203ENST00000476517 C12orf74Q32Q52 190 aa8.68□□□□□ -1.02
CDKAL1-203ENST00000476517 NTM-AS1Q6ZSK4 140 aa8.68□□□□□ -1.02
CDKAL1-203ENST00000476517 MRPL52Q86TS9 123 aaKnown RBP8.68□□□□□ -1.02
CDKAL1-203ENST00000476517 CSDC2Q9Y534 153 aaKnown RBP8.68□□□□□ -1.02
CDKAL1-203ENST00000476517 ICOSQ9Y6W8 199 aa8.68□□□□□ -1.02
CDKAL1-203ENST00000476517 A0A0J9YY99 117 aa8.67□□□□□ -1.02
CDKAL1-203ENST00000476517 FGF6P10767 208 aa8.67□□□□□ -1.02
CDKAL1-203ENST00000476517 ZC2HC1BQ5TFG8 222 aa8.67□□□□□ -1.02
CDKAL1-203ENST00000476517 OR5A1Q8NGJ0 315 aa8.67□□□□□ -1.02
CDKAL1-203ENST00000476517 RYR2Q92736 4967 aa8.67□□□□□ -1.02
CDKAL1-203ENST00000476517 VSIG2Q96IQ7 327 aa8.67□□□□□ -1.02
CDKAL1-203ENST00000476517 AMELXQ99217 191 aa8.67□□□□□ -1.02
CDKAL1-203ENST00000476517 H3BNG1 76 aa8.66□□□□□ -1.02
CDKAL1-203ENST00000476517 HNRNPA3P51991 378 aaKnown RBP8.66□□□□□ -1.02
CDKAL1-203ENST00000476517 ANKRD39Q53RE8 183 aa8.66□□□□□ -1.02
CDKAL1-203ENST00000476517 SLC25A34Q6PIV7 304 aa8.66□□□□□ -1.02
CDKAL1-203ENST00000476517 Q6ZUT4 128 aa8.66□□□□□ -1.02
CDKAL1-203ENST00000476517 C11orf45Q8TAV5 145 aa8.66□□□□□ -1.02
CDKAL1-203ENST00000476517 MRAPQ8TCY5 172 aa8.66□□□□□ -1.02
CDKAL1-203ENST00000476517 OPRPNQ99935 248 aaPredicted RBP8.66□□□□□ -1.02
CDKAL1-203ENST00000476517 CHCHD5Q9BSY4 110 aa8.66□□□□□ -1.02
CDKAL1-203ENST00000476517 CHAC1Q9BUX1 264 aa8.66□□□□□ -1.02
CDKAL1-203ENST00000476517 IGLV4-69A0A075B6H9 119 aa8.65□□□□□ -1.02
CDKAL1-203ENST00000476517 COX8AP10176 69 aa8.65□□□□□ -1.02
CDKAL1-203ENST00000476517 CEMP1Q6PRD7 247 aaPredicted RBP8.65□□□□□ -1.02
CDKAL1-203ENST00000476517 NFE4Q86UQ8 179 aa8.65□□□□□ -1.02
CDKAL1-203ENST00000476517 STPG4Q8N801 248 aa8.65□□□□□ -1.02
CDKAL1-203ENST00000476517 C14orf144Q96I85 54 aa8.65□□□□□ -1.02
CDKAL1-203ENST00000476517 C11orf86A6NJI1 115 aa8.64□□□□□ -1.03
CDKAL1-203ENST00000476517 LINC00587B1AMM8 73 aa8.64□□□□□ -1.03
CDKAL1-203ENST00000476517 NMUP48645 174 aa8.64□□□□□ -1.03
CDKAL1-203ENST00000476517 DYNC2H1Q8NCM8 4307 aaKnown RBP8.63□□□□□ -1.03
CDKAL1-203ENST00000476517 SEC11AP67812 179 aa8.63□□□□□ -1.03
CDKAL1-203ENST00000476517 GAGE6Q13070 117 aa8.63□□□□□ -1.03
CDKAL1-203ENST00000476517 TMEM170BQ5T4T1 132 aa8.63□□□□□ -1.03
CDKAL1-203ENST00000476517 Q6ZTC4 211 aa8.63□□□□□ -1.03
CDKAL1-203ENST00000476517 DNAH3Q8TD57 4116 aa8.63□□□□□ -1.03
CDKAL1-203ENST00000476517 A0A096LPF7 62 aa8.62□□□□□ -1.03
CDKAL1-203ENST00000476517 RNASE13Q5GAN3 156 aaKnown RBP8.62□□□□□ -1.03
CDKAL1-203ENST00000476517 GEMIN7Q9H840 131 aaKnown RBP8.62□□□□□ -1.03
CDKAL1-203ENST00000476517 DEFB131BA0A096LNP1 70 aa8.61□□□□□ -1.03
CDKAL1-203ENST00000476517 A0A0J9YXV3 536 aa8.61□□□□□ -1.03
CDKAL1-203ENST00000476517 TINCRA0A1B0GVN0 87 aa8.61□□□□□ -1.03
CDKAL1-203ENST00000476517 E9PLD3 99 aa8.61□□□□□ -1.03
CDKAL1-203ENST00000476517 DLEU1O43261 78 aa8.61□□□□□ -1.03
CDKAL1-203ENST00000476517 TCTAP57738 103 aa8.61□□□□□ -1.03
CDKAL1-203ENST00000476517 NANOS2P60321 138 aaKnown RBP8.61□□□□□ -1.03
CDKAL1-203ENST00000476517 FAM104AQ969W3 186 aa8.61□□□□□ -1.03
CDKAL1-203ENST00000476517 B9D2Q9BPU9 175 aa8.61□□□□□ -1.03
CDKAL1-203ENST00000476517 CDC42SE2Q9NRR3 84 aa8.61□□□□□ -1.03
CDKAL1-203ENST00000476517 TRAV10A0A0B4J240 114 aa8.6□□□□□ -1.03
CDKAL1-203ENST00000476517 H3BRM9 83 aa8.6□□□□□ -1.03
CDKAL1-203ENST00000476517 UBE2D1P51668 147 aa8.6□□□□□ -1.03
CDKAL1-203ENST00000476517 HERVK_113P63121 156 aa8.6□□□□□ -1.03
CDKAL1-203ENST00000476517 LELP1Q5T871 98 aa8.6□□□□□ -1.03
CDKAL1-203ENST00000476517 MRPS16Q9Y3D3 137 aaKnown RBP8.6□□□□□ -1.03
CDKAL1-203ENST00000476517 A0A1B0GUV1 79 aa8.59□□□□□ -1.03
CDKAL1-203ENST00000476517 TMEM262E9PQX1 116 aa8.59□□□□□ -1.03
CDKAL1-203ENST00000476517 ZNF22P17026 224 aaPredicted RBP8.59□□□□□ -1.03
CDKAL1-203ENST00000476517 TIRAPP58753 221 aa8.59□□□□□ -1.03
CDKAL1-203ENST00000476517 BOD1L2Q8IYS8 172 aa8.59□□□□□ -1.03
CDKAL1-203ENST00000476517 KRTAP4-8Q9BYQ9 185 aa8.59□□□□□ -1.03
CDKAL1-203ENST00000476517 IGKV2D-26A0A0A0MRZ7 120 aa8.58□□□□□ -1.04
CDKAL1-203ENST00000476517 SIVA1O15304 175 aa8.58□□□□□ -1.04
CDKAL1-203ENST00000476517 FAM19A3Q7Z5A8 133 aa8.58□□□□□ -1.04
CDKAL1-203ENST00000476517 LINC00469Q8N7U9 141 aa8.58□□□□□ -1.04
CDKAL1-203ENST00000476517 SACSQ9NZJ4 4579 aa8.58□□□□□ -1.04
CDKAL1-203ENST00000476517 TRAV8-6A0A0B4J262 113 aa8.57□□□□□ -1.04
CDKAL1-203ENST00000476517 TMEM223A0PJW6 202 aa8.57□□□□□ -1.04
CDKAL1-203ENST00000476517 PCP2Q8IVA1 136 aa8.57□□□□□ -1.04
CDKAL1-203ENST00000476517 C15orf53Q8NAA6 179 aa8.57□□□□□ -1.04
CDKAL1-203ENST00000476517 PLEKHB2Q96CS7 222 aa8.57□□□□□ -1.04
CDKAL1-203ENST00000476517 IGLV5-45A0A087WSX0 123 aa8.56□□□□□ -1.04
CDKAL1-203ENST00000476517 TRAV13-1A0A0B4J241 112 aa8.56□□□□□ -1.04
CDKAL1-203ENST00000476517 LEPROTO15243 131 aa8.56□□□□□ -1.04
CDKAL1-203ENST00000476517 LGALS3P17931 250 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms