RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 COMMD7Q86VX2 200 aa9.92□□□□□ -0.82
APOBEC3F-203ENST00000476513 ISOC2Q96AB3 205 aa9.92□□□□□ -0.82
APOBEC3F-203ENST00000476513 RPL39LQ96EH5 51 aaKnown RBP9.92□□□□□ -0.82
APOBEC3F-203ENST00000476513 IGLV1-50A0A075B6I6 118 aa9.91□□□□□ -0.82
APOBEC3F-203ENST00000476513 XKRY2A2RUG3 117 aa9.91□□□□□ -0.82
APOBEC3F-203ENST00000476513 H0Y9J4 135 aa9.91□□□□□ -0.82
APOBEC3F-203ENST00000476513 IFNA1P01562 189 aa9.91□□□□□ -0.82
APOBEC3F-203ENST00000476513 CENPWQ5EE01 88 aa9.91□□□□□ -0.82
APOBEC3F-203ENST00000476513 CD164L2Q6UWJ8 174 aa9.91□□□□□ -0.82
APOBEC3F-203ENST00000476513 NUP35Q8NFH5 326 aa9.91□□□□□ -0.82
APOBEC3F-203ENST00000476513 FAM213BQ8TBF2 198 aa9.91□□□□□ -0.82
APOBEC3F-203ENST00000476513 TMEM101Q96IK0 257 aa9.91□□□□□ -0.82
APOBEC3F-203ENST00000476513 BTF3L4Q96K17 158 aa9.91□□□□□ -0.82
APOBEC3F-203ENST00000476513 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.9□□□□□ -0.82
APOBEC3F-203ENST00000476513 APOMO95445 188 aa9.9□□□□□ -0.82
APOBEC3F-203ENST00000476513 MEF2BQ02080 365 aaPredicted RBP9.9□□□□□ -0.82
APOBEC3F-203ENST00000476513 SS18Q15532 418 aa9.9□□□□□ -0.82
APOBEC3F-203ENST00000476513 C11orf52Q96A22 123 aa9.9□□□□□ -0.82
APOBEC3F-203ENST00000476513 SDHAF1A6NFY7 115 aa9.89□□□□□ -0.83
APOBEC3F-203ENST00000476513 KRTAP1-4P0C5Y4 121 aa9.89□□□□□ -0.83
APOBEC3F-203ENST00000476513 TWIST1Q15672 202 aa9.89□□□□□ -0.83
APOBEC3F-203ENST00000476513 CTRLP40313 264 aa9.88□□□□□ -0.83
APOBEC3F-203ENST00000476513 RPL18AQ02543 176 aaKnown RBP9.88□□□□□ -0.83
APOBEC3F-203ENST00000476513 KRTAP11-1Q8IUC1 163 aa9.88□□□□□ -0.83
APOBEC3F-203ENST00000476513 CAMK2N2Q96S95 79 aa9.88□□□□□ -0.83
APOBEC3F-203ENST00000476513 A0A087WZ39 114 aa9.87□□□□□ -0.83
APOBEC3F-203ENST00000476513 EIF5AL1Q6IS14 154 aaKnown RBP9.87□□□□□ -0.83
APOBEC3F-203ENST00000476513 CNFNQ9BYD5 112 aa9.87□□□□□ -0.83
APOBEC3F-203ENST00000476513 CDC42SE2Q9NRR3 84 aa9.87□□□□□ -0.83
APOBEC3F-203ENST00000476513 RAB19A4D1S5 217 aa9.86□□□□□ -0.83
APOBEC3F-203ENST00000476513 UMAD1C9J7I0 102 aa9.86□□□□□ -0.83
APOBEC3F-203ENST00000476513 ESDP10768 282 aa9.86□□□□□ -0.83
APOBEC3F-203ENST00000476513 PMCHP20382 165 aa9.86□□□□□ -0.83
APOBEC3F-203ENST00000476513 MALP21145 153 aa9.86□□□□□ -0.83
APOBEC3F-203ENST00000476513 I3L3M4 83 aa9.85□□□□□ -0.83
APOBEC3F-203ENST00000476513 H2AFB1P0C5Y9 115 aa9.85□□□□□ -0.83
APOBEC3F-203ENST00000476513 UBE2D1P51668 147 aa9.85□□□□□ -0.83
APOBEC3F-203ENST00000476513 FOXA3P55318 350 aaPredicted RBP9.85□□□□□ -0.83
APOBEC3F-203ENST00000476513 SMIM12Q96EX1 92 aa9.85□□□□□ -0.83
APOBEC3F-203ENST00000476513 C2orf48Q96LS8 159 aa9.85□□□□□ -0.83
APOBEC3F-203ENST00000476513 OPRPNQ99935 248 aaPredicted RBP9.85□□□□□ -0.83
APOBEC3F-203ENST00000476513 COX7A2LO14548 114 aa9.84□□□□□ -0.83
APOBEC3F-203ENST00000476513 GNG4P50150 75 aa9.84□□□□□ -0.83
APOBEC3F-203ENST00000476513 CCL20P78556 96 aa9.84□□□□□ -0.83
APOBEC3F-203ENST00000476513 MRPL52Q86TS9 123 aaKnown RBP9.84□□□□□ -0.83
APOBEC3F-203ENST00000476513 TRAV1-1A0A0B4J248 108 aa9.83□□□□□ -0.84
APOBEC3F-203ENST00000476513 TSHBP01222 138 aa9.83□□□□□ -0.84
APOBEC3F-203ENST00000476513 NUDT10Q8NFP7 164 aa9.83□□□□□ -0.84
APOBEC3F-203ENST00000476513 MRAP2Q96G30 205 aa9.83□□□□□ -0.84
APOBEC3F-203ENST00000476513 NUDT11Q96G61 164 aa9.83□□□□□ -0.84
APOBEC3F-203ENST00000476513 GNG13Q9P2W3 67 aa9.83□□□□□ -0.84
APOBEC3F-203ENST00000476513 TRBV20OR9-2A0A075B6H5 130 aa9.82□□□□□ -0.84
APOBEC3F-203ENST00000476513 RPL13AP40429 203 aaKnown RBP9.82□□□□□ -0.84
APOBEC3F-203ENST00000476513 UQCC3Q6UW78 93 aa9.82□□□□□ -0.84
APOBEC3F-203ENST00000476513 MANBALQ9NQG1 85 aa9.82□□□□□ -0.84
APOBEC3F-203ENST00000476513 TMEM242Q9NWH2 141 aa9.82□□□□□ -0.84
APOBEC3F-203ENST00000476513 TRBV6-5A0A0K0K1A5 114 aa9.81□□□□□ -0.84
APOBEC3F-203ENST00000476513 FAM168BA1KXE4 195 aa9.81□□□□□ -0.84
APOBEC3F-203ENST00000476513 C1orf196B1AJZ1 125 aa9.81□□□□□ -0.84
APOBEC3F-203ENST00000476513 RNF151Q2KHN1 245 aa9.81□□□□□ -0.84
APOBEC3F-203ENST00000476513 TSKUQ8WUA8 353 aa9.81□□□□□ -0.84
APOBEC3F-203ENST00000476513 BIN3Q9NQY0 253 aa9.81□□□□□ -0.84
APOBEC3F-203ENST00000476513 TEX46H3BTG2 121 aa9.8□□□□□ -0.84
APOBEC3F-203ENST00000476513 BLOC1S1P78537 153 aa9.8□□□□□ -0.84
APOBEC3F-203ENST00000476513 SMIM15Q7Z3B0 74 aa9.8□□□□□ -0.84
APOBEC3F-203ENST00000476513 C5orf38Q86SI9 138 aa9.79□□□□□ -0.84
APOBEC3F-203ENST00000476513 RNASE7Q9H1E1 156 aaKnown RBP9.79□□□□□ -0.84
APOBEC3F-203ENST00000476513 TSPAN13O95857 204 aa9.78□□□□□ -0.84
APOBEC3F-203ENST00000476513 SPAG11BQ08648 103 aa9.78□□□□□ -0.84
APOBEC3F-203ENST00000476513 RPP21Q9H633 154 aaKnown RBP9.78□□□□□ -0.84
APOBEC3F-203ENST00000476513 C7orf77A4D0Y5 90 aa9.77□□□□□ -0.85
APOBEC3F-203ENST00000476513 RNASE13Q5GAN3 156 aaKnown RBP9.77□□□□□ -0.85
APOBEC3F-203ENST00000476513 FAM19A5Q7Z5A7 132 aaPredicted RBP9.77□□□□□ -0.85
APOBEC3F-203ENST00000476513 ST20Q9HBF5 79 aa9.77□□□□□ -0.85
APOBEC3F-203ENST00000476513 CARHSP1Q9Y2V2 147 aaKnown RBP9.77□□□□□ -0.85
APOBEC3F-203ENST00000476513 TRAV13-1A0A0B4J241 112 aa9.76□□□□□ -0.85
APOBEC3F-203ENST00000476513 KRTAP7-1Q8IUC3 87 aa9.76□□□□□ -0.85
APOBEC3F-203ENST00000476513 MRPL35Q9NZE8 188 aaKnown RBP9.76□□□□□ -0.85
APOBEC3F-203ENST00000476513 PDE6DO43924 150 aa9.75□□□□□ -0.85
APOBEC3F-203ENST00000476513 POLR2KP53803 58 aaKnown RBP9.75□□□□□ -0.85
APOBEC3F-203ENST00000476513 IMMP2LQ96T52 175 aa9.75□□□□□ -0.85
APOBEC3F-203ENST00000476513 TRBV27A0A0K0K1C4 114 aa9.74□□□□□ -0.85
APOBEC3F-203ENST00000476513 OR10D4PQ8NGN7 298 aa9.74□□□□□ -0.85
APOBEC3F-203ENST00000476513 CSDC2Q9Y534 153 aaKnown RBP9.74□□□□□ -0.85
APOBEC3F-203ENST00000476513 TMEM218A2RU14 115 aa9.73□□□□□ -0.85
APOBEC3F-203ENST00000476513 K7EN84 100 aa9.73□□□□□ -0.85
APOBEC3F-203ENST00000476513 UBE2BP63146 152 aa9.73□□□□□ -0.85
APOBEC3F-203ENST00000476513 C10orf25Q5T742 122 aa9.73□□□□□ -0.85
APOBEC3F-203ENST00000476513 UBE2D4Q9Y2X8 147 aa9.73□□□□□ -0.85
APOBEC3F-203ENST00000476513 M0QXV9 152 aa9.72□□□□□ -0.85
APOBEC3F-203ENST00000476513 TLX1NBP0CAT3 122 aa9.72□□□□□ -0.85
APOBEC3F-203ENST00000476513 C10orf91Q5T1B1 145 aa9.72□□□□□ -0.85
APOBEC3F-203ENST00000476513 GAGE2EQ4V326 116 aa9.71□□□□□ -0.86
APOBEC3F-203ENST00000476513 Q6ZUT4 128 aa9.71□□□□□ -0.86
APOBEC3F-203ENST00000476513 ORAOV1Q8WV07 137 aa9.71□□□□□ -0.86
APOBEC3F-203ENST00000476513 GAGE2DQ9UEU5 116 aa9.71□□□□□ -0.86
APOBEC3F-203ENST00000476513 F8WDY8 70 aa9.7□□□□□ -0.86
APOBEC3F-203ENST00000476513 NDUFA1O15239 70 aa9.7□□□□□ -0.86
APOBEC3F-203ENST00000476513 UNQ6190/PRO20217Q6UXQ8 127 aa9.7□□□□□ -0.86
APOBEC3F-203ENST00000476513 OCC1Q8TAD7 63 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 364.8 ms