RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 LINC00336Q6ZUF6 198 aa3.02□□□□□ -1.93
VPS13D-206ENST00000476045 NEGR1Q7Z3B1 354 aa3.02□□□□□ -1.93
VPS13D-206ENST00000476045 ZFAND2AQ8N6M9 145 aa3.02□□□□□ -1.93
VPS13D-206ENST00000476045 MAPKAPK5-AS1Q8N8E1 139 aa3.02□□□□□ -1.93
VPS13D-206ENST00000476045 DEFB104AQ8WTQ1 72 aa3.02□□□□□ -1.93
VPS13D-206ENST00000476045 RPL39LQ96EH5 51 aaKnown RBP3.02□□□□□ -1.93
VPS13D-206ENST00000476045 SCGB3A1Q96QR1 104 aa3.02□□□□□ -1.93
VPS13D-206ENST00000476045 VPS25Q9BRG1 176 aa3.02□□□□□ -1.93
VPS13D-206ENST00000476045 CHAC1Q9BUX1 264 aa3.02□□□□□ -1.93
VPS13D-206ENST00000476045 CNFNQ9BYD5 112 aa3.02□□□□□ -1.93
VPS13D-206ENST00000476045 CST9LQ9H4G1 147 aa3.02□□□□□ -1.93
VPS13D-206ENST00000476045 MRPL35Q9NZE8 188 aaKnown RBP3.02□□□□□ -1.93
VPS13D-206ENST00000476045 HLA-DRB4X5D2U9 266 aa3.02□□□□□ -1.93
VPS13D-206ENST00000476045 NACAE9PAV3 2078 aa3.01□□□□□ -1.93
VPS13D-206ENST00000476045 A0A087WX48 190 aa3.01□□□□□ -1.93
VPS13D-206ENST00000476045 TRAV21A0A0B4J279 112 aa3.01□□□□□ -1.93
VPS13D-206ENST00000476045 IGHV4-28A0A0C4DH34 117 aa3.01□□□□□ -1.93
VPS13D-206ENST00000476045 GAGE12JA6NER3 117 aa3.01□□□□□ -1.93
VPS13D-206ENST00000476045 SOCS3O14543 225 aa3.01□□□□□ -1.93
VPS13D-206ENST00000476045 SMIM13P0DJ93 91 aa3.01□□□□□ -1.93
VPS13D-206ENST00000476045 P0DMU3 169 aa3.01□□□□□ -1.93
VPS13D-206ENST00000476045 FAM231AP0DMU4 169 aa3.01□□□□□ -1.93
VPS13D-206ENST00000476045 FAM231CP0DMU5 169 aa3.01□□□□□ -1.93
VPS13D-206ENST00000476045 ID1P41134 155 aa3.01□□□□□ -1.93
VPS13D-206ENST00000476045 FXYD2P54710 66 aa3.01□□□□□ -1.93
VPS13D-206ENST00000476045 PSMG4Q5JS54 123 aa3.01□□□□□ -1.93
VPS13D-206ENST00000476045 ZC2HC1BQ5TFG8 222 aa3.01□□□□□ -1.93
VPS13D-206ENST00000476045 UFSP1Q6NVU6 142 aa3.01□□□□□ -1.93
VPS13D-206ENST00000476045 FOXI2Q6ZQN5 318 aa3.01□□□□□ -1.93
VPS13D-206ENST00000476045 GTF2H5Q6ZYL4 71 aa3.01□□□□□ -1.93
VPS13D-206ENST00000476045 C14orf178Q8N769 122 aaPredicted RBP3.01□□□□□ -1.93
VPS13D-206ENST00000476045 RASL10AQ92737 203 aa3.01□□□□□ -1.93
VPS13D-206ENST00000476045 MRAP2Q96G30 205 aa3.01□□□□□ -1.93
VPS13D-206ENST00000476045 LINC00477Q96M19 166 aa3.01□□□□□ -1.93
VPS13D-206ENST00000476045 SMIM2Q9BVW6 85 aa3.01□□□□□ -1.93
VPS13D-206ENST00000476045 CHTOPQ9Y3Y2 248 aaKnown RBP3.01□□□□□ -1.93
VPS13D-206ENST00000476045 SPCS1Q9Y6A9 102 aa3.01□□□□□ -1.93
VPS13D-206ENST00000476045 FAT2Q9NYQ8 4349 aa3.01□□□□□ -1.93
VPS13D-206ENST00000476045 DNAH11Q96DT5 4516 aa3□□□□□ -1.93
VPS13D-206ENST00000476045 TRBV25-1A0A075B6N4 114 aa3□□□□□ -1.93
VPS13D-206ENST00000476045 IGHV4-4A0A075B6R2 117 aa3□□□□□ -1.93
VPS13D-206ENST00000476045 A0A1W2PPM0 123 aa3□□□□□ -1.93
VPS13D-206ENST00000476045 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3□□□□□ -1.93
VPS13D-206ENST00000476045 H7C1H1 209 aa3□□□□□ -1.93
VPS13D-206ENST00000476045 IGKV3-20P01619 116 aa3□□□□□ -1.93
VPS13D-206ENST00000476045 FABP2P12104 132 aa3□□□□□ -1.93
VPS13D-206ENST00000476045 DPH3P1Q9H4G8 78 aa3□□□□□ -1.93
VPS13D-206ENST00000476045 JPT2Q9H910 190 aa3□□□□□ -1.93
VPS13D-206ENST00000476045 NHP2Q9NX24 153 aaKnown RBP3□□□□□ -1.93
VPS13D-206ENST00000476045 HIGD1BQ9P298 99 aa3□□□□□ -1.93
VPS13D-206ENST00000476045 HHLA3Q9XRX5 114 aa3□□□□□ -1.93
VPS13D-206ENST00000476045 PHLDA3Q9Y5J5 127 aa3□□□□□ -1.93
VPS13D-206ENST00000476045 DNAH17Q9UFH2 4485 aa3□□□□□ -1.93
VPS13D-206ENST00000476045 RYR1P21817 5038 aa3□□□□□ -1.93
VPS13D-206ENST00000476045 DEFB131BA0A096LNP1 70 aa2.99□□□□□ -1.93
VPS13D-206ENST00000476045 A8MTW9 85 aa2.99□□□□□ -1.93
VPS13D-206ENST00000476045 IGLL5B9A064 214 aa2.99□□□□□ -1.93
VPS13D-206ENST00000476045 H3BMM0 161 aa2.99□□□□□ -1.93
VPS13D-206ENST00000476045 DUSP14O95147 198 aaKnown RBP2.99□□□□□ -1.93
VPS13D-206ENST00000476045 INSP01308 110 aa2.99□□□□□ -1.93
VPS13D-206ENST00000476045 GIG44P09565 113 aaPredicted RBP2.99□□□□□ -1.93
VPS13D-206ENST00000476045 SPART-AS1P0CW21 52 aa2.99□□□□□ -1.93
VPS13D-206ENST00000476045 RPL24P83731 157 aaKnown RBP2.99□□□□□ -1.93
VPS13D-206ENST00000476045 GAGE2BQ13066 116 aa2.99□□□□□ -1.93
VPS13D-206ENST00000476045 GAGE2EQ4V326 116 aa2.99□□□□□ -1.93
VPS13D-206ENST00000476045 ORMDL2Q53FV1 153 aa2.99□□□□□ -1.93
VPS13D-206ENST00000476045 GAGE2AQ6NT46 116 aa2.99□□□□□ -1.93
VPS13D-206ENST00000476045 C2orf66Q6UXQ4 117 aa2.99□□□□□ -1.93
VPS13D-206ENST00000476045 Q6ZTC4 211 aa2.99□□□□□ -1.93
VPS13D-206ENST00000476045 CEND1Q8N111 149 aa2.99□□□□□ -1.93
VPS13D-206ENST00000476045 C15orf53Q8NAA6 179 aa2.99□□□□□ -1.93
VPS13D-206ENST00000476045 CSNK1G2-AS1Q8NCQ2 148 aa2.99□□□□□ -1.93
VPS13D-206ENST00000476045 TOMM6Q96B49 74 aa2.99□□□□□ -1.93
VPS13D-206ENST00000476045 FAM19A4Q96LR4 140 aa2.99□□□□□ -1.93
VPS13D-206ENST00000476045 HIST1H4GQ99525 98 aa2.99□□□□□ -1.93
VPS13D-206ENST00000476045 GAGE2DQ9UEU5 116 aa2.99□□□□□ -1.93
VPS13D-206ENST00000476045 APLNQ9ULZ1 77 aa2.99□□□□□ -1.93
VPS13D-206ENST00000476045 LENEPQ9Y5L5 61 aa2.99□□□□□ -1.93
VPS13D-206ENST00000476045 DNAH2Q9P225 4427 aa2.99□□□□□ -1.93
VPS13D-206ENST00000476045 KIAA1109Q2LD37 5005 aa2.98□□□□□ -1.93
VPS13D-206ENST00000476045 TRAV12-2A0A075B6T6 113 aa2.98□□□□□ -1.93
VPS13D-206ENST00000476045 TRAV12-1A0A0B4J245 112 aa2.98□□□□□ -1.93
VPS13D-206ENST00000476045 TRAV12-3A0A0B4J271 114 aa2.98□□□□□ -1.93
VPS13D-206ENST00000476045 MYMXA0A1B0GTQ4 84 aa2.98□□□□□ -1.93
VPS13D-206ENST00000476045 KNCNA6PVL3 124 aa2.98□□□□□ -1.93
VPS13D-206ENST00000476045 LYRM9A8MSI8 78 aa2.98□□□□□ -1.93
VPS13D-206ENST00000476045 F8VRH5 84 aa2.98□□□□□ -1.93
VPS13D-206ENST00000476045 K7ERU9 68 aa2.98□□□□□ -1.93
VPS13D-206ENST00000476045 RBMY1A1P0DJD3 496 aaKnown RBP2.98□□□□□ -1.93
VPS13D-206ENST00000476045 RBMY1CP0DJD4 496 aa2.98□□□□□ -1.93
VPS13D-206ENST00000476045 RNASE3P12724 160 aaKnown RBP2.98□□□□□ -1.93
VPS13D-206ENST00000476045 PLNP26678 52 aa2.98□□□□□ -1.93
VPS13D-206ENST00000476045 EMP1P54849 157 aa2.98□□□□□ -1.93
VPS13D-206ENST00000476045 RBMY1FQ15415 496 aaKnown RBP2.98□□□□□ -1.93
VPS13D-206ENST00000476045 RRN3P1Q2M238 152 aa2.98□□□□□ -1.93
VPS13D-206ENST00000476045 C12orf74Q32Q52 190 aa2.98□□□□□ -1.93
VPS13D-206ENST00000476045 POM121L12Q8N7R1 296 aa2.98□□□□□ -1.93
VPS13D-206ENST00000476045 NEXN-AS1Q8NBZ9 246 aa2.98□□□□□ -1.93
VPS13D-206ENST00000476045 OR5A1Q8NGJ0 315 aa2.98□□□□□ -1.93
VPS13D-206ENST00000476045 BAALCQ8WXS3 180 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms