RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 BEAN1Q3B7T3 259 aa4.98□□□□□ -1.61
UBR4-212ENST00000475973 SCGB1D4Q6XE38 83 aa4.98□□□□□ -1.61
UBR4-212ENST00000475973 Q6ZUT4 128 aa4.98□□□□□ -1.61
UBR4-212ENST00000475973 SYT8Q8NBV8 401 aa4.98□□□□□ -1.61
UBR4-212ENST00000475973 FAM30AQ9NZY2 134 aa4.98□□□□□ -1.61
UBR4-212ENST00000475973 TRGV11A0A075B6L2 103 aa4.97□□□□□ -1.61
UBR4-212ENST00000475973 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.97□□□□□ -1.61
UBR4-212ENST00000475973 TRAV12-3A0A0B4J271 114 aa4.97□□□□□ -1.61
UBR4-212ENST00000475973 A0A1B0GV72 72 aa4.97□□□□□ -1.61
UBR4-212ENST00000475973 A4D1N5 150 aa4.97□□□□□ -1.61
UBR4-212ENST00000475973 TMEM262E9PQX1 116 aa4.97□□□□□ -1.61
UBR4-212ENST00000475973 IGHV3-11P01762 117 aa4.97□□□□□ -1.61
UBR4-212ENST00000475973 ELANEP08246 267 aa4.97□□□□□ -1.61
UBR4-212ENST00000475973 RBMY1A1P0DJD3 496 aaKnown RBP4.97□□□□□ -1.61
UBR4-212ENST00000475973 RBMY1CP0DJD4 496 aa4.97□□□□□ -1.61
UBR4-212ENST00000475973 XGP55808 180 aa4.97□□□□□ -1.61
UBR4-212ENST00000475973 KRTAP10-3P60369 221 aa4.97□□□□□ -1.61
UBR4-212ENST00000475973 RBMY1FQ15415 496 aaKnown RBP4.97□□□□□ -1.61
UBR4-212ENST00000475973 Q6Q795 121 aa4.97□□□□□ -1.61
UBR4-212ENST00000475973 Q8N2B8 174 aa4.97□□□□□ -1.61
UBR4-212ENST00000475973 MTURNQ8N3F0 131 aa4.97□□□□□ -1.61
UBR4-212ENST00000475973 TIMM21Q9BVV7 248 aa4.97□□□□□ -1.61
UBR4-212ENST00000475973 A0A087WWL8 130 aa4.96□□□□□ -1.62
UBR4-212ENST00000475973 IGHV1-58A0A0C4DH39 117 aa4.96□□□□□ -1.62
UBR4-212ENST00000475973 TINCRA0A1B0GVN0 87 aa4.96□□□□□ -1.62
UBR4-212ENST00000475973 A8MWV9 139 aa4.96□□□□□ -1.62
UBR4-212ENST00000475973 ZNF688P0C7X2 276 aa4.96□□□□□ -1.62
UBR4-212ENST00000475973 TIRAPP58753 221 aa4.96□□□□□ -1.62
UBR4-212ENST00000475973 MUSTN1Q8IVN3 82 aa4.96□□□□□ -1.62
UBR4-212ENST00000475973 C11orf44Q8N8P7 122 aa4.96□□□□□ -1.62
UBR4-212ENST00000475973 DNAJC30Q96LL9 226 aa4.96□□□□□ -1.62
UBR4-212ENST00000475973 UBE2E2Q96LR5 201 aa4.96□□□□□ -1.62
UBR4-212ENST00000475973 CHCHD7Q9BUK0 85 aa4.96□□□□□ -1.62
UBR4-212ENST00000475973 ZNF702PQ9H963 129 aa4.96□□□□□ -1.62
UBR4-212ENST00000475973 SPANXA1Q9NS26 97 aa4.96□□□□□ -1.62
UBR4-212ENST00000475973 MGAM2Q2M2H8 2515 aa4.96□□□□□ -1.62
UBR4-212ENST00000475973 IGLV5-39A0A0G2JS06 123 aa4.95□□□□□ -1.62
UBR4-212ENST00000475973 A0A0J9YXV3 536 aa4.95□□□□□ -1.62
UBR4-212ENST00000475973 TRBV10-2A0A0K0K1G8 114 aa4.95□□□□□ -1.62
UBR4-212ENST00000475973 B5MCH6 92 aa4.95□□□□□ -1.62
UBR4-212ENST00000475973 SLC25A20O43772 301 aa4.95□□□□□ -1.62
UBR4-212ENST00000475973 MT-ATP8P03928 68 aa4.95□□□□□ -1.62
UBR4-212ENST00000475973 IGHV3-30-3P0DP02 117 aa4.95□□□□□ -1.62
UBR4-212ENST00000475973 PSMB2P49721 201 aa4.95□□□□□ -1.62
UBR4-212ENST00000475973 SNRPD3P62318 126 aaKnown RBP4.95□□□□□ -1.62
UBR4-212ENST00000475973 MRPL23Q16540 153 aaKnown RBP4.95□□□□□ -1.62
UBR4-212ENST00000475973 LINC01620Q4KN68 170 aa4.95□□□□□ -1.62
UBR4-212ENST00000475973 TMEM170BQ5T4T1 132 aa4.95□□□□□ -1.62
UBR4-212ENST00000475973 ZFAND6Q6FIF0 208 aa4.95□□□□□ -1.62
UBR4-212ENST00000475973 IL17DQ8TAD2 202 aa4.95□□□□□ -1.62
UBR4-212ENST00000475973 OPRPNQ99935 248 aaPredicted RBP4.95□□□□□ -1.62
UBR4-212ENST00000475973 UBE2D4Q9Y2X8 147 aa4.95□□□□□ -1.62
UBR4-212ENST00000475973 A0A1W2PRX2 142 aa4.94□□□□□ -1.62
UBR4-212ENST00000475973 RBMY1BA6NDE4 496 aaKnown RBP4.94□□□□□ -1.62
UBR4-212ENST00000475973 RBMY1EA6NEQ0 496 aaKnown RBP4.94□□□□□ -1.62
UBR4-212ENST00000475973 H3BMM0 161 aa4.94□□□□□ -1.62
UBR4-212ENST00000475973 IGHV3-53P01767 116 aa4.94□□□□□ -1.62
UBR4-212ENST00000475973 RBMY1DP0C7P1 496 aaKnown RBP4.94□□□□□ -1.62
UBR4-212ENST00000475973 IFITM1P13164 125 aa4.94□□□□□ -1.62
UBR4-212ENST00000475973 LGALS3P17931 250 aaKnown RBP4.94□□□□□ -1.62
UBR4-212ENST00000475973 EMP1P54849 157 aa4.94□□□□□ -1.62
UBR4-212ENST00000475973 SLURP1P55000 103 aa4.94□□□□□ -1.62
UBR4-212ENST00000475973 ANKRD29Q8N6D5 301 aa4.94□□□□□ -1.62
UBR4-212ENST00000475973 C11orf72Q8NBR9 251 aa4.94□□□□□ -1.62
UBR4-212ENST00000475973 VSIG2Q96IQ7 327 aa4.94□□□□□ -1.62
UBR4-212ENST00000475973 ERG28Q9UKR5 140 aa4.94□□□□□ -1.62
UBR4-212ENST00000475973 CSDC2Q9Y534 153 aaKnown RBP4.94□□□□□ -1.62
UBR4-212ENST00000475973 LOC107984156A0A0G2JMH3 177 aa4.93□□□□□ -1.62
UBR4-212ENST00000475973 FAM240AA0A1B0GVK7 77 aa4.93□□□□□ -1.62
UBR4-212ENST00000475973 H3BT86 120 aa4.93□□□□□ -1.62
UBR4-212ENST00000475973 RS1O15537 224 aa4.93□□□□□ -1.62
UBR4-212ENST00000475973 SPINK8P0C7L1 97 aa4.93□□□□□ -1.62
UBR4-212ENST00000475973 NHLRC4P0CG21 123 aaPredicted RBP4.93□□□□□ -1.62
UBR4-212ENST00000475973 CKS1BP61024 79 aa4.93□□□□□ -1.62
UBR4-212ENST00000475973 MIAQ16674 131 aa4.93□□□□□ -1.62
UBR4-212ENST00000475973 ADAMTSL4-AS1Q5T5F5 129 aa4.93□□□□□ -1.62
UBR4-212ENST00000475973 SDIM1Q6ZPB5 146 aa4.93□□□□□ -1.62
UBR4-212ENST00000475973 Q6ZSN1 163 aa4.93□□□□□ -1.62
UBR4-212ENST00000475973 ARL17AQ8IVW1 177 aa4.93□□□□□ -1.62
UBR4-212ENST00000475973 TRAV12-2A0A075B6T6 113 aa4.92□□□□□ -1.62
UBR4-212ENST00000475973 F5H697 171 aa4.92□□□□□ -1.62
UBR4-212ENST00000475973 LST1O00453 97 aa4.92□□□□□ -1.62
UBR4-212ENST00000475973 CD28P10747 220 aa4.92□□□□□ -1.62
UBR4-212ENST00000475973 ATXN8Q156A1 80 aa4.92□□□□□ -1.62
UBR4-212ENST00000475973 ZNF56Q15929 161 aa4.92□□□□□ -1.62
UBR4-212ENST00000475973 KPRPQ5T749 579 aaPredicted RBP4.92□□□□□ -1.62
UBR4-212ENST00000475973 C10orf99Q6UWK7 81 aa4.92□□□□□ -1.62
UBR4-212ENST00000475973 TMEM61Q8N0U2 210 aa4.92□□□□□ -1.62
UBR4-212ENST00000475973 CITED2Q99967 270 aaPredicted RBP4.92□□□□□ -1.62
UBR4-212ENST00000475973 SPXQ9BT56 116 aa4.92□□□□□ -1.62
UBR4-212ENST00000475973 TRRAPQ9Y4A5 3859 aa4.91□□□□□ -1.62
UBR4-212ENST00000475973 NDUFA1O15239 70 aa4.91□□□□□ -1.62
UBR4-212ENST00000475973 TRIAP1O43715 76 aa4.91□□□□□ -1.62
UBR4-212ENST00000475973 SCGB1C2P0DMR2 95 aa4.91□□□□□ -1.62
UBR4-212ENST00000475973 HOXD3P31249 432 aaPredicted RBP4.91□□□□□ -1.62
UBR4-212ENST00000475973 SPINK13Q1W4C9 94 aa4.91□□□□□ -1.62
UBR4-212ENST00000475973 MRAPQ8TCY5 172 aa4.91□□□□□ -1.62
UBR4-212ENST00000475973 GEMIN7Q9H840 131 aaKnown RBP4.91□□□□□ -1.62
UBR4-212ENST00000475973 IGKV3-7A0A075B6H7 116 aa4.9□□□□□ -1.63
UBR4-212ENST00000475973 C9JAW5 83 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms