RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 KRTAP9-8Q9BYQ0 159 aa6.45□□□□□ -1.38
CALD1-217ENST00000475772 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.44□□□□□ -1.38
CALD1-217ENST00000475772 IGKV2-29A2NJV5 120 aaPredicted RBP6.44□□□□□ -1.38
CALD1-217ENST00000475772 FAM231BA6NCW3 169 aa6.44□□□□□ -1.38
CALD1-217ENST00000475772 TRGC1P0CF51 173 aa6.44□□□□□ -1.38
CALD1-217ENST00000475772 FOXA3P55318 350 aaPredicted RBP6.44□□□□□ -1.38
CALD1-217ENST00000475772 RPL39LQ96EH5 51 aaKnown RBP6.44□□□□□ -1.38
CALD1-217ENST00000475772 CNFNQ9BYD5 112 aa6.44□□□□□ -1.38
CALD1-217ENST00000475772 GNG13Q9P2W3 67 aa6.44□□□□□ -1.38
CALD1-217ENST00000475772 TRAV1-1A0A0B4J248 108 aa6.43□□□□□ -1.38
CALD1-217ENST00000475772 HMSDA8MTL9 139 aa6.43□□□□□ -1.38
CALD1-217ENST00000475772 BCL2L11O43521 198 aa6.42□□□□□ -1.38
CALD1-217ENST00000475772 IFNA1P01562 189 aa6.42□□□□□ -1.38
CALD1-217ENST00000475772 FGF6P10767 208 aa6.42□□□□□ -1.38
CALD1-217ENST00000475772 CTRLP40313 264 aa6.42□□□□□ -1.38
CALD1-217ENST00000475772 SMIM12Q96EX1 92 aa6.42□□□□□ -1.38
CALD1-217ENST00000475772 MANBALQ9NQG1 85 aa6.42□□□□□ -1.38
CALD1-217ENST00000475772 LINC00959A0A1B0GUT2 108 aa6.41□□□□□ -1.38
CALD1-217ENST00000475772 XKRY2A2RUG3 117 aa6.41□□□□□ -1.38
CALD1-217ENST00000475772 H7C423 109 aa6.41□□□□□ -1.38
CALD1-217ENST00000475772 GAS8-AS1O95177 125 aa6.41□□□□□ -1.38
CALD1-217ENST00000475772 NCR2O95944 276 aa6.41□□□□□ -1.38
CALD1-217ENST00000475772 GNG4P50150 75 aa6.41□□□□□ -1.38
CALD1-217ENST00000475772 TWIST1Q15672 202 aa6.41□□□□□ -1.38
CALD1-217ENST00000475772 RNASEKQ6P5S7 137 aaKnown RBP6.41□□□□□ -1.38
CALD1-217ENST00000475772 OR5A1Q8NGJ0 315 aa6.41□□□□□ -1.38
CALD1-217ENST00000475772 BATF3Q9NR55 127 aa6.41□□□□□ -1.38
CALD1-217ENST00000475772 A0A1W2PNN7 141 aa6.4□□□□□ -1.38
CALD1-217ENST00000475772 KANTRA0A1W2PQU2 76 aa6.4□□□□□ -1.38
CALD1-217ENST00000475772 K7EN84 100 aa6.4□□□□□ -1.38
CALD1-217ENST00000475772 ESDP10768 282 aa6.4□□□□□ -1.38
CALD1-217ENST00000475772 XCL1P47992 114 aa6.4□□□□□ -1.38
CALD1-217ENST00000475772 SUMO2P61956 95 aaKnown RBP6.4□□□□□ -1.38
CALD1-217ENST00000475772 AMMECR1LQ6DCA0 310 aa6.4□□□□□ -1.38
CALD1-217ENST00000475772 REG3GQ6UW15 175 aa6.4□□□□□ -1.38
CALD1-217ENST00000475772 Q6ZRP5 223 aa6.4□□□□□ -1.38
CALD1-217ENST00000475772 OCC1Q8TAD7 63 aa6.4□□□□□ -1.38
CALD1-217ENST00000475772 RNASE7Q9H1E1 156 aaKnown RBP6.4□□□□□ -1.38
CALD1-217ENST00000475772 MED9Q9NWA0 146 aa6.4□□□□□ -1.38
CALD1-217ENST00000475772 IGHV1-58A0A0C4DH39 117 aa6.39□□□□□ -1.39
CALD1-217ENST00000475772 SDHAF1A6NFY7 115 aa6.39□□□□□ -1.39
CALD1-217ENST00000475772 CCL25O15444 150 aa6.39□□□□□ -1.39
CALD1-217ENST00000475772 APCSP02743 223 aa6.39□□□□□ -1.39
CALD1-217ENST00000475772 MEF2BQ02080 365 aaPredicted RBP6.39□□□□□ -1.39
CALD1-217ENST00000475772 CARD19Q96LW7 228 aa6.38□□□□□ -1.39
CALD1-217ENST00000475772 RPP21Q9H633 154 aaKnown RBP6.38□□□□□ -1.39
CALD1-217ENST00000475772 CDC42SE2Q9NRR3 84 aa6.38□□□□□ -1.39
CALD1-217ENST00000475772 LINC00474Q9P2X8 69 aa6.38□□□□□ -1.39
CALD1-217ENST00000475772 TRBV6-5A0A0K0K1A5 114 aa6.37□□□□□ -1.39
CALD1-217ENST00000475772 PDE6DO43924 150 aa6.37□□□□□ -1.39
CALD1-217ENST00000475772 TSHBP01222 138 aa6.37□□□□□ -1.39
CALD1-217ENST00000475772 ZNF25P17030 456 aaPredicted RBP6.37□□□□□ -1.39
CALD1-217ENST00000475772 POLR2KP53803 58 aaKnown RBP6.37□□□□□ -1.39
CALD1-217ENST00000475772 EIF5AP63241 154 aaKnown RBP6.37□□□□□ -1.39
CALD1-217ENST00000475772 SYCNQ0VAF6 134 aa6.37□□□□□ -1.39
CALD1-217ENST00000475772 RGS21Q2M5E4 152 aa6.37□□□□□ -1.39
CALD1-217ENST00000475772 BIN3Q9NQY0 253 aa6.37□□□□□ -1.39
CALD1-217ENST00000475772 I3L3M4 83 aa6.36□□□□□ -1.39
CALD1-217ENST00000475772 PMCHP20382 165 aa6.36□□□□□ -1.39
CALD1-217ENST00000475772 GAGE2BQ13066 116 aa6.36□□□□□ -1.39
CALD1-217ENST00000475772 CD164L2Q6UWJ8 174 aa6.36□□□□□ -1.39
CALD1-217ENST00000475772 PSORS1C2Q9UIG4 136 aa6.36□□□□□ -1.39
CALD1-217ENST00000475772 MUC2Q02817 5179 aa6.36□□□□□ -1.39
CALD1-217ENST00000475772 IGLV4-69A0A075B6H9 119 aa6.35□□□□□ -1.39
CALD1-217ENST00000475772 BCL2P10415 239 aa6.35□□□□□ -1.39
CALD1-217ENST00000475772 MRPL52Q86TS9 123 aaKnown RBP6.35□□□□□ -1.39
CALD1-217ENST00000475772 NUP35Q8NFH5 326 aa6.35□□□□□ -1.39
CALD1-217ENST00000475772 TMEM242Q9NWH2 141 aa6.35□□□□□ -1.39
CALD1-217ENST00000475772 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.34□□□□□ -1.39
CALD1-217ENST00000475772 CAMPP49913 170 aa6.34□□□□□ -1.39
CALD1-217ENST00000475772 SS18Q15532 418 aa6.34□□□□□ -1.39
CALD1-217ENST00000475772 TEX261Q6UWH6 196 aa6.34□□□□□ -1.39
CALD1-217ENST00000475772 PHF5AQ7RTV0 110 aaKnown RBP6.34□□□□□ -1.39
CALD1-217ENST00000475772 KRTAP11-1Q8IUC1 163 aa6.34□□□□□ -1.39
CALD1-217ENST00000475772 ZNF664Q8N3J9 261 aa6.34□□□□□ -1.39
CALD1-217ENST00000475772 TMEM101Q96IK0 257 aa6.34□□□□□ -1.39
CALD1-217ENST00000475772 BTF3L4Q96K17 158 aa6.34□□□□□ -1.39
CALD1-217ENST00000475772 LOC107984640A0A0U1RRK4 108 aa6.33□□□□□ -1.4
CALD1-217ENST00000475772 C9orf116Q5BN46 136 aaPredicted RBP6.33□□□□□ -1.4
CALD1-217ENST00000475772 TRBV27A0A0K0K1C4 114 aa6.32□□□□□ -1.4
CALD1-217ENST00000475772 TEX46H3BTG2 121 aa6.32□□□□□ -1.4
CALD1-217ENST00000475772 GATCO43716 136 aaKnown RBP6.32□□□□□ -1.4
CALD1-217ENST00000475772 RAB4AP20338 218 aa6.32□□□□□ -1.4
CALD1-217ENST00000475772 FAM231DQ6ZW35 169 aa6.32□□□□□ -1.4
CALD1-217ENST00000475772 PRR26Q8N8Z3 221 aa6.32□□□□□ -1.4
CALD1-217ENST00000475772 MRAP2Q96G30 205 aa6.32□□□□□ -1.4
CALD1-217ENST00000475772 ST20Q9HBF5 79 aa6.32□□□□□ -1.4
CALD1-217ENST00000475772 PKIGQ9Y2B9 76 aa6.32□□□□□ -1.4
CALD1-217ENST00000475772 RNASE13Q5GAN3 156 aaKnown RBP6.31□□□□□ -1.4
CALD1-217ENST00000475772 C1orf137Q5JT78 98 aa6.31□□□□□ -1.4
CALD1-217ENST00000475772 EIF5AL1Q6IS14 154 aaKnown RBP6.31□□□□□ -1.4
CALD1-217ENST00000475772 SMIM15Q7Z3B0 74 aa6.31□□□□□ -1.4
CALD1-217ENST00000475772 FAM104AQ969W3 186 aa6.31□□□□□ -1.4
CALD1-217ENST00000475772 OPRPNQ99935 248 aaPredicted RBP6.31□□□□□ -1.4
CALD1-217ENST00000475772 TMEM191AQ9H0A3 160 aa6.31□□□□□ -1.4
CALD1-217ENST00000475772 C7orf77A4D0Y5 90 aa6.3□□□□□ -1.4
CALD1-217ENST00000475772 A8MWL6 223 aa6.3□□□□□ -1.4
CALD1-217ENST00000475772 SMKR1H3BMG3 65 aa6.3□□□□□ -1.4
CALD1-217ENST00000475772 APOMO95445 188 aa6.3□□□□□ -1.4
CALD1-217ENST00000475772 C5orf38Q86SI9 138 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms