RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 FAM107BQ9H098 131 aa-0.2□□□□□ -2.44
LTN1-204ENST00000475344 LRP6O75581 1613 aa-0.2□□□□□ -2.44
LTN1-204ENST00000475344 TRAV22A0A0B4J277 110 aa-0.21□□□□□ -2.44
LTN1-204ENST00000475344 C10orf142B7Z368 130 aa-0.21□□□□□ -2.44
LTN1-204ENST00000475344 WFDC2Q14508 124 aa-0.21□□□□□ -2.44
LTN1-204ENST00000475344 KRTAP6-1Q3LI64 71 aa-0.21□□□□□ -2.44
LTN1-204ENST00000475344 PPRC1Q5VV67 1664 aaKnown RBP-0.21□□□□□ -2.44
LTN1-204ENST00000475344 PPIP5K1Q6PFW1 1433 aa-0.21□□□□□ -2.44
LTN1-204ENST00000475344 PIGBOS1A0A0B4J2F0 54 aa-0.22□□□□□ -2.44
LTN1-204ENST00000475344 LOC100130705A0A1B0GUX0 176 aa-0.22□□□□□ -2.44
LTN1-204ENST00000475344 S100A12P80511 92 aa-0.22□□□□□ -2.44
LTN1-204ENST00000475344 C12orf73Q69YU5 71 aa-0.22□□□□□ -2.44
LTN1-204ENST00000475344 SMIM4Q8WVI0 70 aa-0.22□□□□□ -2.44
LTN1-204ENST00000475344 LENEPQ9Y5L5 61 aa-0.22□□□□□ -2.44
LTN1-204ENST00000475344 PRKDCP78527 4128 aaKnown RBP-0.22□□□□□ -2.45
LTN1-204ENST00000475344 STAB1Q9NY15 2570 aa-0.22□□□□□ -2.45
LTN1-204ENST00000475344 LRRC37A2A6NM11 1700 aa-0.23□□□□□ -2.45
LTN1-204ENST00000475344 DEFB109BQ30KR1 87 aa-0.23□□□□□ -2.45
LTN1-204ENST00000475344 TSLPQ969D9 159 aa-0.23□□□□□ -2.45
LTN1-204ENST00000475344 AMELXQ99217 191 aa-0.23□□□□□ -2.45
LTN1-204ENST00000475344 NAA60Q9H7X0 242 aa-0.23□□□□□ -2.45
LTN1-204ENST00000475344 V9GYH0 126 aa-0.23□□□□□ -2.45
LTN1-204ENST00000475344 APC2O95996 2303 aa-0.23□□□□□ -2.45
LTN1-204ENST00000475344 MBD5Q9P267 1494 aa-0.23□□□□□ -2.45
LTN1-204ENST00000475344 URB1O60287 2271 aaKnown RBP-0.24□□□□□ -2.45
LTN1-204ENST00000475344 KIF21AQ7Z4S6 1674 aa-0.24□□□□□ -2.45
LTN1-204ENST00000475344 BTAF1O14981 1849 aa-0.24□□□□□ -2.45
LTN1-204ENST00000475344 SETXQ7Z333 2677 aaKnown RBP-0.24□□□□□ -2.45
LTN1-204ENST00000475344 MIF4GDA9UHW6 222 aaKnown RBP-0.24□□□□□ -2.45
LTN1-204ENST00000475344 K7EP13 123 aa-0.24□□□□□ -2.45
LTN1-204ENST00000475344 Q8IZM0 81 aa-0.24□□□□□ -2.45
LTN1-204ENST00000475344 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.24□□□□□ -2.45
LTN1-204ENST00000475344 TSC22D3Q99576 134 aa-0.24□□□□□ -2.45
LTN1-204ENST00000475344 LINC00472Q9H8W2 130 aa-0.24□□□□□ -2.45
LTN1-204ENST00000475344 SPCS1Q9Y6A9 102 aa-0.24□□□□□ -2.45
LTN1-204ENST00000475344 CHD8Q9HCK8 2581 aa-0.24□□□□□ -2.45
LTN1-204ENST00000475344 ERCC6L2Q5T890 1561 aa-0.24□□□□□ -2.45
LTN1-204ENST00000475344 MAP1AP78559 2803 aaPredicted RBP-0.25□□□□□ -2.45
LTN1-204ENST00000475344 HMGN1P05114 100 aa-0.25□□□□□ -2.45
LTN1-204ENST00000475344 BTG2P78543 158 aa-0.25□□□□□ -2.45
LTN1-204ENST00000475344 Q56UQ5 140 aa-0.25□□□□□ -2.45
LTN1-204ENST00000475344 NDUFA4L2Q9NRX3 87 aa-0.25□□□□□ -2.45
LTN1-204ENST00000475344 ROBO1Q9Y6N7 1651 aa-0.25□□□□□ -2.45
LTN1-204ENST00000475344 KMT2CQ8NEZ4 4911 aaKnown RBP-0.26□□□□□ -2.45
LTN1-204ENST00000475344 CATR1Q13166 79 aa-0.26□□□□□ -2.45
LTN1-204ENST00000475344 TMEM170BQ5T4T1 132 aa-0.26□□□□□ -2.45
LTN1-204ENST00000475344 Q5VSD8 79 aa-0.26□□□□□ -2.45
LTN1-204ENST00000475344 PPP3R2Q96LZ3 170 aa-0.26□□□□□ -2.45
LTN1-204ENST00000475344 TP53AIP1Q9HCN2 124 aa-0.26□□□□□ -2.45
LTN1-204ENST00000475344 PCLOQ9Y6V0 5065 aa-0.26□□□□□ -2.45
LTN1-204ENST00000475344 CPSF1Q10570 1443 aaKnown RBP-0.27□□□□□ -2.45
LTN1-204ENST00000475344 TRBV7-3A0A075B6L6 115 aa-0.27□□□□□ -2.45
LTN1-204ENST00000475344 F8VRH5 84 aa-0.27□□□□□ -2.45
LTN1-204ENST00000475344 I3L2K1 104 aa-0.27□□□□□ -2.45
LTN1-204ENST00000475344 SPRR1AP35321 89 aa-0.27□□□□□ -2.45
LTN1-204ENST00000475344 BAGE2Q86Y30 109 aa-0.27□□□□□ -2.45
LTN1-204ENST00000475344 SPANXDQ9BXN6 97 aa-0.27□□□□□ -2.45
LTN1-204ENST00000475344 TSC2P49815 1807 aa-0.28□□□□□ -2.45
LTN1-204ENST00000475344 IGLC7A0M8Q6 106 aa-0.28□□□□□ -2.45
LTN1-204ENST00000475344 APOC2P02655 101 aa-0.28□□□□□ -2.45
LTN1-204ENST00000475344 Q6JHZ5 121 aa-0.28□□□□□ -2.45
LTN1-204ENST00000475344 MGST2Q99735 147 aa-0.28□□□□□ -2.45
LTN1-204ENST00000475344 DYNLRB1Q9NP97 96 aa-0.28□□□□□ -2.45
LTN1-204ENST00000475344 LINC00474Q9P2X8 69 aa-0.28□□□□□ -2.45
LTN1-204ENST00000475344 RIMS1Q86UR5 1692 aaKnown RBP-0.28□□□□□ -2.45
LTN1-204ENST00000475344 C10orf71Q711Q0 1435 aa-0.29□□□□□ -2.46
LTN1-204ENST00000475344 QRICH2Q9H0J4 1663 aa-0.29□□□□□ -2.46
LTN1-204ENST00000475344 HMGN4O00479 90 aa-0.29□□□□□ -2.46
LTN1-204ENST00000475344 UQCR11O14957 56 aa-0.29□□□□□ -2.46
LTN1-204ENST00000475344 PRM1P04553 51 aa-0.29□□□□□ -2.46
LTN1-204ENST00000475344 FGF7P21781 194 aa-0.29□□□□□ -2.46
LTN1-204ENST00000475344 S100A3P33764 101 aa-0.29□□□□□ -2.46
LTN1-204ENST00000475344 COX17Q14061 63 aa-0.29□□□□□ -2.46
LTN1-204ENST00000475344 LINC01558Q9Y6Z2 57 aa-0.29□□□□□ -2.46
LTN1-204ENST00000475344 PAPPAQ13219 1627 aa-0.3□□□□□ -2.46
LTN1-204ENST00000475344 FXYD6-FXYD2A0A087WZ82 144 aa-0.3□□□□□ -2.46
LTN1-204ENST00000475344 OOSP1A8MZH6 123 aa-0.3□□□□□ -2.46
LTN1-204ENST00000475344 AKAIN1P0CW23 69 aa-0.3□□□□□ -2.46
LTN1-204ENST00000475344 C5orf38Q86SI9 138 aa-0.3□□□□□ -2.46
LTN1-204ENST00000475344 COL6A3P12111 3177 aa-0.3□□□□□ -2.46
LTN1-204ENST00000475344 DNAJC13O75165 2243 aa-0.3□□□□□ -2.46
LTN1-204ENST00000475344 NAIPQ13075 1403 aa-0.3□□□□□ -2.46
LTN1-204ENST00000475344 ACANP16112 2415 aa-0.3□□□□□ -2.46
LTN1-204ENST00000475344 SHROOM2Q13796 1616 aa-0.31□□□□□ -2.46
LTN1-204ENST00000475344 IFNGP01579 166 aa-0.31□□□□□ -2.46
LTN1-204ENST00000475344 COMMD6Q7Z4G1 85 aa-0.31□□□□□ -2.46
LTN1-204ENST00000475344 C8orf59Q8N0T1 100 aaPredicted RBP-0.31□□□□□ -2.46
LTN1-204ENST00000475344 MUC2Q02817 5179 aa-0.31□□□□□ -2.46
LTN1-204ENST00000475344 ROCK2O75116 1388 aaKnown RBP-0.32□□□□□ -2.46
LTN1-204ENST00000475344 TRBV6-1A0A0K0K1D8 114 aa-0.32□□□□□ -2.46
LTN1-204ENST00000475344 SSSCA1O60232 199 aa-0.32□□□□□ -2.46
LTN1-204ENST00000475344 APOC3P02656 99 aa-0.32□□□□□ -2.46
LTN1-204ENST00000475344 SPRR2DP22532 72 aa-0.32□□□□□ -2.46
LTN1-204ENST00000475344 TPPP2P59282 170 aa-0.32□□□□□ -2.46
LTN1-204ENST00000475344 DCDP81605 110 aaKnown RBP-0.32□□□□□ -2.46
LTN1-204ENST00000475344 C1orf54Q8WWF1 131 aa-0.32□□□□□ -2.46
LTN1-204ENST00000475344 PP6455Q8WZ26 134 aa-0.32□□□□□ -2.46
LTN1-204ENST00000475344 FLNBO75369 2602 aaKnown RBP-0.32□□□□□ -2.46
LTN1-204ENST00000475344 CUL7Q14999 1698 aa-0.33□□□□□ -2.46
LTN1-204ENST00000475344 BCL9LQ86UU0 1499 aa-0.33□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms