RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 CDK2AP2O75956 126 aa10.65□□□□□ -0.7
SRM-204ENST00000475189 GCSHP23434 173 aa10.65□□□□□ -0.7
SRM-204ENST00000475189 RPS10P5Q9NQ39 176 aa10.65□□□□□ -0.7
SRM-204ENST00000475189 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.64□□□□□ -0.71
SRM-204ENST00000475189 IGKV3OR2-268A0A0C4DH90 116 aa10.64□□□□□ -0.71
SRM-204ENST00000475189 PRSS47A8MTI9 375 aa10.64□□□□□ -0.71
SRM-204ENST00000475189 TCAPO15273 167 aa10.64□□□□□ -0.71
SRM-204ENST00000475189 S100PP25815 95 aa10.64□□□□□ -0.71
SRM-204ENST00000475189 OR5A1Q8NGJ0 315 aa10.64□□□□□ -0.71
SRM-204ENST00000475189 LAMTOR2Q9Y2Q5 125 aa10.64□□□□□ -0.71
SRM-204ENST00000475189 USP17L23D6RBM5 183 aa10.63□□□□□ -0.71
SRM-204ENST00000475189 APOC3P02656 99 aa10.63□□□□□ -0.71
SRM-204ENST00000475189 CDC42SE2Q9NRR3 84 aa10.63□□□□□ -0.71
SRM-204ENST00000475189 HSPG2P98160 4391 aa10.62□□□□□ -0.71
SRM-204ENST00000475189 DNAH8Q96JB1 4490 aa10.62□□□□□ -0.71
SRM-204ENST00000475189 C14orf177Q52M58 125 aa10.62□□□□□ -0.71
SRM-204ENST00000475189 UBE2D4Q9Y2X8 147 aa10.62□□□□□ -0.71
SRM-204ENST00000475189 DGAT2L7PQ6IED9 249 aa10.61□□□□□ -0.71
SRM-204ENST00000475189 ZNF664Q8N3J9 261 aa10.61□□□□□ -0.71
SRM-204ENST00000475189 TMEM18Q96B42 140 aa10.61□□□□□ -0.71
SRM-204ENST00000475189 MAP1LC3AQ9H492 121 aa10.61□□□□□ -0.71
SRM-204ENST00000475189 CSDC2Q9Y534 153 aaKnown RBP10.61□□□□□ -0.71
SRM-204ENST00000475189 LOC389332A0A1B0GUA5 103 aa10.6□□□□□ -0.71
SRM-204ENST00000475189 GAGE12HA6NDE8 117 aa10.6□□□□□ -0.71
SRM-204ENST00000475189 RPL39P62891 51 aaKnown RBP10.6□□□□□ -0.71
SRM-204ENST00000475189 SMAGPQ0VAQ4 97 aa10.6□□□□□ -0.71
SRM-204ENST00000475189 NDUFA5Q16718 116 aa10.6□□□□□ -0.71
SRM-204ENST00000475189 KIAA1644Q3SXP7 199 aa10.6□□□□□ -0.71
SRM-204ENST00000475189 CHCHD10Q8WYQ3 142 aaPredicted RBP10.6□□□□□ -0.71
SRM-204ENST00000475189 TIMM21Q9BVV7 248 aa10.6□□□□□ -0.71
SRM-204ENST00000475189 LINC00959A0A1B0GUT2 108 aa10.59□□□□□ -0.71
SRM-204ENST00000475189 SNAPINO95295 136 aa10.59□□□□□ -0.71
SRM-204ENST00000475189 PRSS1P07477 247 aa10.59□□□□□ -0.71
SRM-204ENST00000475189 SVBPQ8N300 66 aa10.59□□□□□ -0.71
SRM-204ENST00000475189 GNB1LQ9BYB4 327 aa10.59□□□□□ -0.71
SRM-204ENST00000475189 RAB5AP20339 215 aa10.58□□□□□ -0.72
SRM-204ENST00000475189 COX19Q49B96 90 aa10.58□□□□□ -0.72
SRM-204ENST00000475189 Q8N8P6 123 aa10.58□□□□□ -0.72
SRM-204ENST00000475189 XGP55808 180 aa10.57□□□□□ -0.72
SRM-204ENST00000475189 Q6ZUT4 128 aa10.57□□□□□ -0.72
SRM-204ENST00000475189 FAM104AQ969W3 186 aa10.57□□□□□ -0.72
SRM-204ENST00000475189 CCL25O15444 150 aa10.56□□□□□ -0.72
SRM-204ENST00000475189 FOXI1Q12951 378 aa10.56□□□□□ -0.72
SRM-204ENST00000475189 LINC01620Q4KN68 170 aa10.56□□□□□ -0.72
SRM-204ENST00000475189 RNASE13Q5GAN3 156 aaKnown RBP10.56□□□□□ -0.72
SRM-204ENST00000475189 TMEM238LA0A1B0GVL6 79 aa10.55□□□□□ -0.72
SRM-204ENST00000475189 XCL1P47992 114 aa10.55□□□□□ -0.72
SRM-204ENST00000475189 SS18Q15532 418 aa10.55□□□□□ -0.72
SRM-204ENST00000475189 SPANXA1Q9NS26 97 aa10.55□□□□□ -0.72
SRM-204ENST00000475189 FAM30AQ9NZY2 134 aa10.55□□□□□ -0.72
SRM-204ENST00000475189 TGIF2-C20orf24A0A0A6YYL0 155 aa10.54□□□□□ -0.72
SRM-204ENST00000475189 MT-ND6P03923 174 aa10.54□□□□□ -0.72
SRM-204ENST00000475189 IFI27P40305 119 aaPredicted RBP10.54□□□□□ -0.72
SRM-204ENST00000475189 SLC7A5P1Q8MH63 180 aa10.54□□□□□ -0.72
SRM-204ENST00000475189 C15orf56Q8N910 161 aa10.54□□□□□ -0.72
SRM-204ENST00000475189 OPRPNQ99935 248 aaPredicted RBP10.54□□□□□ -0.72
SRM-204ENST00000475189 MRPL18Q9H0U6 180 aaKnown RBP10.54□□□□□ -0.72
SRM-204ENST00000475189 NXT2Q9NPJ8 142 aaKnown RBP10.54□□□□□ -0.72
SRM-204ENST00000475189 hDV102S1A0JD36 115 aa10.53□□□□□ -0.72
SRM-204ENST00000475189 MRPS36P82909 103 aaKnown RBP10.53□□□□□ -0.72
SRM-204ENST00000475189 FABP9Q0Z7S8 132 aa10.53□□□□□ -0.72
SRM-204ENST00000475189 CFAP161Q6P656 301 aa10.53□□□□□ -0.72
SRM-204ENST00000475189 ALKBH7Q9BT30 221 aaPredicted RBP10.53□□□□□ -0.72
SRM-204ENST00000475189 C1orf196B1AJZ1 125 aa10.52□□□□□ -0.73
SRM-204ENST00000475189 K7EMI3 77 aa10.52□□□□□ -0.73
SRM-204ENST00000475189 ORMDL2Q53FV1 153 aa10.52□□□□□ -0.73
SRM-204ENST00000475189 CD164L2Q6UWJ8 174 aa10.52□□□□□ -0.73
SRM-204ENST00000475189 Q6ZSA8 131 aa10.52□□□□□ -0.73
SRM-204ENST00000475189 PYGO1Q9Y3Y4 419 aa10.52□□□□□ -0.73
SRM-204ENST00000475189 TRAV13-1A0A0B4J241 112 aa10.51□□□□□ -0.73
SRM-204ENST00000475189 C2orf66Q6UXQ4 117 aa10.51□□□□□ -0.73
SRM-204ENST00000475189 C9orf163Q8N9P6 203 aa10.51□□□□□ -0.73
SRM-204ENST00000475189 SLPIP03973 132 aa10.5□□□□□ -0.73
SRM-204ENST00000475189 CNBPP62633 177 aaKnown RBP10.5□□□□□ -0.73
SRM-204ENST00000475189 HAMPP81172 84 aa10.5□□□□□ -0.73
SRM-204ENST00000475189 CYSLTR1Q9Y271 337 aa10.5□□□□□ -0.73
SRM-204ENST00000475189 IGLV4-3A0A075B6K6 122 aa10.49□□□□□ -0.73
SRM-204ENST00000475189 HIGD2BQ4VC39 106 aa10.49□□□□□ -0.73
SRM-204ENST00000475189 Q8N1X5 172 aa10.49□□□□□ -0.73
SRM-204ENST00000475189 PRSS3P2Q8NHM4 247 aa10.49□□□□□ -0.73
SRM-204ENST00000475189 YPEL4Q96NS1 127 aa10.49□□□□□ -0.73
SRM-204ENST00000475189 AP5S1Q9NUS5 200 aa10.49□□□□□ -0.73
SRM-204ENST00000475189 TRAPPC1Q9Y5R8 145 aa10.49□□□□□ -0.73
SRM-204ENST00000475189 GVQW2A0A096LPI5 108 aaPredicted RBP10.48□□□□□ -0.73
SRM-204ENST00000475189 KRTAP4-5Q9BYR2 181 aa10.48□□□□□ -0.73
SRM-204ENST00000475189 IGHV1-58A0A0C4DH39 117 aa10.47□□□□□ -0.73
SRM-204ENST00000475189 LINC01546A6NGU7 62 aa10.47□□□□□ -0.73
SRM-204ENST00000475189 TMEM141Q96I45 108 aa10.47□□□□□ -0.73
SRM-204ENST00000475189 IFITM10A6NMD0 228 aa10.46□□□□□ -0.73
SRM-204ENST00000475189 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.45□□□□□ -0.74
SRM-204ENST00000475189 IGIPA6NJ69 53 aa10.45□□□□□ -0.74
SRM-204ENST00000475189 COX7A2LO14548 114 aa10.45□□□□□ -0.74
SRM-204ENST00000475189 G0S2P27469 103 aa10.45□□□□□ -0.74
SRM-204ENST00000475189 SDIM1Q6ZPB5 146 aa10.45□□□□□ -0.74
SRM-204ENST00000475189 CBLN2Q8IUK8 224 aa10.45□□□□□ -0.74
SRM-204ENST00000475189 TOMM6Q96B49 74 aa10.45□□□□□ -0.74
SRM-204ENST00000475189 ABCA13Q86UQ4 5058 aa10.45□□□□□ -0.74
SRM-204ENST00000475189 FAT1Q14517 4588 aa10.45□□□□□ -0.74
SRM-204ENST00000475189 SMR3BP02814 79 aaPredicted RBP10.44□□□□□ -0.74
SRM-204ENST00000475189 NPSP0C0P6 89 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms