RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 PGPEP1Q9NXJ5 209 aa11.19□□□□□ -0.62
SCAF11-206ENST00000474828 IGKV2D-24A0A075B6R9 120 aa11.18□□□□□ -0.62
SCAF11-206ENST00000474828 LINC01546A6NGU7 62 aa11.18□□□□□ -0.62
SCAF11-206ENST00000474828 SMAGPQ0VAQ4 97 aa11.18□□□□□ -0.62
SCAF11-206ENST00000474828 AMMECR1LQ6DCA0 310 aa11.18□□□□□ -0.62
SCAF11-206ENST00000474828 FAM104AQ969W3 186 aa11.18□□□□□ -0.62
SCAF11-206ENST00000474828 NXT2Q9NPJ8 142 aaKnown RBP11.18□□□□□ -0.62
SCAF11-206ENST00000474828 HERC2O95714 4834 aa11.17□□□□□ -0.62
SCAF11-206ENST00000474828 EREGO14944 169 aa11.17□□□□□ -0.62
SCAF11-206ENST00000474828 WFDC2Q14508 124 aa11.17□□□□□ -0.62
SCAF11-206ENST00000474828 KIAA1644Q3SXP7 199 aa11.17□□□□□ -0.62
SCAF11-206ENST00000474828 CDPF1Q6NVV7 123 aa11.17□□□□□ -0.62
SCAF11-206ENST00000474828 OR5A1Q8NGJ0 315 aa11.17□□□□□ -0.62
SCAF11-206ENST00000474828 TMEM18Q96B42 140 aa11.17□□□□□ -0.62
SCAF11-206ENST00000474828 MRPL18Q9H0U6 180 aaKnown RBP11.17□□□□□ -0.62
SCAF11-206ENST00000474828 RNASEKQ6P5S7 137 aaKnown RBP11.16□□□□□ -0.62
SCAF11-206ENST00000474828 SPATA12Q7Z6I5 190 aa11.16□□□□□ -0.62
SCAF11-206ENST00000474828 ZNF664Q8N3J9 261 aa11.16□□□□□ -0.62
SCAF11-206ENST00000474828 Q8N814 137 aa11.16□□□□□ -0.62
SCAF11-206ENST00000474828 TMEM101Q96IK0 257 aa11.16□□□□□ -0.62
SCAF11-206ENST00000474828 SMCO4Q9NRQ5 59 aa11.16□□□□□ -0.62
SCAF11-206ENST00000474828 MRPS36P82909 103 aaKnown RBP11.15□□□□□ -0.62
SCAF11-206ENST00000474828 CLPSL2Q6UWE3 100 aa11.15□□□□□ -0.62
SCAF11-206ENST00000474828 NTN5Q8WTR8 489 aaPredicted RBP11.15□□□□□ -0.62
SCAF11-206ENST00000474828 SPANXA1Q9NS26 97 aa11.15□□□□□ -0.62
SCAF11-206ENST00000474828 PYGO1Q9Y3Y4 419 aa11.15□□□□□ -0.62
SCAF11-206ENST00000474828 RAB5AP20339 215 aa11.14□□□□□ -0.63
SCAF11-206ENST00000474828 RPL39P62891 51 aaKnown RBP11.14□□□□□ -0.63
SCAF11-206ENST00000474828 LOC389332A0A1B0GUA5 103 aa11.13□□□□□ -0.63
SCAF11-206ENST00000474828 CCL25O15444 150 aa11.13□□□□□ -0.63
SCAF11-206ENST00000474828 IFI27P40305 119 aaPredicted RBP11.13□□□□□ -0.63
SCAF11-206ENST00000474828 FABP9Q0Z7S8 132 aa11.13□□□□□ -0.63
SCAF11-206ENST00000474828 ORMDL2Q53FV1 153 aa11.13□□□□□ -0.63
SCAF11-206ENST00000474828 CBLN2Q8IUK8 224 aa11.13□□□□□ -0.63
SCAF11-206ENST00000474828 BAALCQ8WXS3 180 aa11.13□□□□□ -0.63
SCAF11-206ENST00000474828 LINC00959A0A1B0GUT2 108 aa11.12□□□□□ -0.63
SCAF11-206ENST00000474828 NPSP0C0P6 89 aa11.12□□□□□ -0.63
SCAF11-206ENST00000474828 TRAPPC1Q9Y5R8 145 aa11.12□□□□□ -0.63
SCAF11-206ENST00000474828 APOBP04114 4563 aaKnown RBP11.11□□□□□ -0.63
SCAF11-206ENST00000474828 KIAA1109Q2LD37 5005 aa11.11□□□□□ -0.63
SCAF11-206ENST00000474828 IGLV10-54A0A075B6I4 117 aa11.1□□□□□ -0.63
SCAF11-206ENST00000474828 DGAT2L7PQ6IED9 249 aa11.1□□□□□ -0.63
SCAF11-206ENST00000474828 CHCHD10Q8WYQ3 142 aaPredicted RBP11.1□□□□□ -0.63
SCAF11-206ENST00000474828 C16orf90A8MZG2 172 aa11.09□□□□□ -0.63
SCAF11-206ENST00000474828 G0S2P27469 103 aa11.09□□□□□ -0.63
SCAF11-206ENST00000474828 Q6ZUT4 128 aa11.09□□□□□ -0.63
SCAF11-206ENST00000474828 DNAH8Q96JB1 4490 aa11.09□□□□□ -0.63
SCAF11-206ENST00000474828 IGIPA6NJ69 53 aa11.08□□□□□ -0.64
SCAF11-206ENST00000474828 USP17L23D6RBM5 183 aa11.08□□□□□ -0.64
SCAF11-206ENST00000474828 LECT2O14960 151 aa11.08□□□□□ -0.64
SCAF11-206ENST00000474828 FOXI1Q12951 378 aa11.08□□□□□ -0.64
SCAF11-206ENST00000474828 C14orf177Q52M58 125 aa11.08□□□□□ -0.64
SCAF11-206ENST00000474828 C2orf66Q6UXQ4 117 aa11.08□□□□□ -0.64
SCAF11-206ENST00000474828 C18orf32Q8TCD1 76 aa11.08□□□□□ -0.64
SCAF11-206ENST00000474828 CYSLTR1Q9Y271 337 aa11.08□□□□□ -0.64
SCAF11-206ENST00000474828 IGLV4-3A0A075B6K6 122 aa11.07□□□□□ -0.64
SCAF11-206ENST00000474828 LINC01549A6NIU2 74 aa11.07□□□□□ -0.64
SCAF11-206ENST00000474828 COLCA2A8K830 154 aa11.07□□□□□ -0.64
SCAF11-206ENST00000474828 C1orf196B1AJZ1 125 aa11.07□□□□□ -0.64
SCAF11-206ENST00000474828 CD164L2Q6UWJ8 174 aa11.07□□□□□ -0.64
SCAF11-206ENST00000474828 PRSS3P2Q8NHM4 247 aa11.07□□□□□ -0.64
SCAF11-206ENST00000474828 URB1-AS1Q96HZ7 61 aa11.07□□□□□ -0.64
SCAF11-206ENST00000474828 RYR1P21817 5038 aa11.06□□□□□ -0.64
SCAF11-206ENST00000474828 GAGE12HA6NDE8 117 aa11.06□□□□□ -0.64
SCAF11-206ENST00000474828 J3QL48 77 aa11.06□□□□□ -0.64
SCAF11-206ENST00000474828 SS18Q15532 418 aa11.06□□□□□ -0.64
SCAF11-206ENST00000474828 TOMM6Q96B49 74 aa11.06□□□□□ -0.64
SCAF11-206ENST00000474828 PRSS1P07477 247 aa11.05□□□□□ -0.64
SCAF11-206ENST00000474828 AMELXQ99217 191 aa11.05□□□□□ -0.64
SCAF11-206ENST00000474828 TIMM17AQ99595 171 aa11.05□□□□□ -0.64
SCAF11-206ENST00000474828 OPRPNQ99935 248 aaPredicted RBP11.05□□□□□ -0.64
SCAF11-206ENST00000474828 PCLOQ9Y6V0 5065 aa11.04□□□□□ -0.64
SCAF11-206ENST00000474828 IGLV5-52A0A0A0MRZ9 124 aa11.04□□□□□ -0.64
SCAF11-206ENST00000474828 IGKV3OR2-268A0A0C4DH90 116 aa11.04□□□□□ -0.64
SCAF11-206ENST00000474828 CDK2AP2O75956 126 aa11.04□□□□□ -0.64
SCAF11-206ENST00000474828 FUSP35637 526 aaKnown RBP eCLIP11.04□□□□□ -0.64
SCAF11-206ENST00000474828 C15orf56Q8N910 161 aa11.04□□□□□ -0.64
SCAF11-206ENST00000474828 HSPG2P98160 4391 aa11.04□□□□□ -0.64
SCAF11-206ENST00000474828 GCSHP23434 173 aa11.03□□□□□ -0.64
SCAF11-206ENST00000474828 CNBPP62633 177 aaKnown RBP11.03□□□□□ -0.64
SCAF11-206ENST00000474828 RNASE13Q5GAN3 156 aaKnown RBP11.03□□□□□ -0.64
SCAF11-206ENST00000474828 LINC00173Q6ZV60 143 aa11.03□□□□□ -0.64
SCAF11-206ENST00000474828 TMEM141Q96I45 108 aa11.03□□□□□ -0.64
SCAF11-206ENST00000474828 LINC00614P0C842 121 aa11.02□□□□□ -0.65
SCAF11-206ENST00000474828 XCL1P47992 114 aa11.02□□□□□ -0.65
SCAF11-206ENST00000474828 SMCPP49901 116 aaPredicted RBP11.02□□□□□ -0.65
SCAF11-206ENST00000474828 KRTAP10-1P60331 282 aa11.02□□□□□ -0.65
SCAF11-206ENST00000474828 ERASQ7Z444 233 aa11.02□□□□□ -0.65
SCAF11-206ENST00000474828 FAM19A3Q7Z5A8 133 aa11.02□□□□□ -0.65
SCAF11-206ENST00000474828 AP5S1Q9NUS5 200 aa11.02□□□□□ -0.65
SCAF11-206ENST00000474828 A0A096LNJ9 63 aa11.01□□□□□ -0.65
SCAF11-206ENST00000474828 GVQW2A0A096LPI5 108 aaPredicted RBP11.01□□□□□ -0.65
SCAF11-206ENST00000474828 IGHV3OR16-9A0A0B4J2B5 98 aa11.01□□□□□ -0.65
SCAF11-206ENST00000474828 CFAP161Q6P656 301 aa11.01□□□□□ -0.65
SCAF11-206ENST00000474828 FA2HQ7L5A8 372 aa11.01□□□□□ -0.65
SCAF11-206ENST00000474828 TRAV13-1A0A0B4J241 112 aa11□□□□□ -0.65
SCAF11-206ENST00000474828 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.99□□□□□ -0.65
SCAF11-206ENST00000474828 IFITM10A6NMD0 228 aa10.99□□□□□ -0.65
SCAF11-206ENST00000474828 SLPIP03973 132 aa10.99□□□□□ -0.65
SCAF11-206ENST00000474828 TRGC2P03986 189 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms