RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 AP5S1Q9NUS5 200 aa8.91□□□□□ -0.98
CCDC78-209ENST00000474647 KIF25-AS1Q9Y6Z4 181 aa8.91□□□□□ -0.98
CCDC78-209ENST00000474647 A0A087WYN8 130 aa8.9□□□□□ -0.98
CCDC78-209ENST00000474647 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.9□□□□□ -0.98
CCDC78-209ENST00000474647 IGHV1-24A0A0C4DH33 117 aa8.9□□□□□ -0.98
CCDC78-209ENST00000474647 MGPP08493 103 aa8.9□□□□□ -0.98
CCDC78-209ENST00000474647 CNBPP62633 177 aaKnown RBP8.9□□□□□ -0.98
CCDC78-209ENST00000474647 HBBP68871 147 aa8.9□□□□□ -0.98
CCDC78-209ENST00000474647 CIRBPQ14011 172 aaKnown RBP8.9□□□□□ -0.98
CCDC78-209ENST00000474647 PHOX2AO14813 284 aa8.89□□□□□ -0.99
CCDC78-209ENST00000474647 SMIM15Q7Z3B0 74 aa8.89□□□□□ -0.99
CCDC78-209ENST00000474647 GATD1Q8NB37 220 aa8.89□□□□□ -0.99
CCDC78-209ENST00000474647 TMEM191AQ9H0A3 160 aa8.89□□□□□ -0.99
CCDC78-209ENST00000474647 S100A8P05109 93 aa8.88□□□□□ -0.99
CCDC78-209ENST00000474647 IQCJQ1A5X6 159 aa8.88□□□□□ -0.99
CCDC78-209ENST00000474647 RASL11AQ6T310 242 aa8.88□□□□□ -0.99
CCDC78-209ENST00000474647 SPACA4Q8TDM5 124 aa8.88□□□□□ -0.99
CCDC78-209ENST00000474647 RNF185Q96GF1 192 aa8.88□□□□□ -0.99
CCDC78-209ENST00000474647 CAMPP49913 170 aa8.87□□□□□ -0.99
CCDC78-209ENST00000474647 C20orf203Q8NBC4 194 aa8.87□□□□□ -0.99
CCDC78-209ENST00000474647 C7orf33Q8WU49 177 aa8.87□□□□□ -0.99
CCDC78-209ENST00000474647 TRAV8-4A0A0B4J246 113 aa8.86□□□□□ -0.99
CCDC78-209ENST00000474647 SLPIP03973 132 aa8.86□□□□□ -0.99
CCDC78-209ENST00000474647 RAB5AP20339 215 aa8.86□□□□□ -0.99
CCDC78-209ENST00000474647 IGLV4-60A0A075B6I1 120 aa8.85□□□□□ -0.99
CCDC78-209ENST00000474647 TRBV24-1A0A075B6N3 115 aa8.85□□□□□ -0.99
CCDC78-209ENST00000474647 H7C1H1 209 aa8.85□□□□□ -0.99
CCDC78-209ENST00000474647 ODF1Q14990 250 aa8.85□□□□□ -0.99
CCDC78-209ENST00000474647 SUMO4Q6EEV6 95 aa8.85□□□□□ -0.99
CCDC78-209ENST00000474647 AMN1Q8IY45 258 aa8.85□□□□□ -0.99
CCDC78-209ENST00000474647 TMEM243Q9BU79 118 aa8.85□□□□□ -0.99
CCDC78-209ENST00000474647 TGIF2-C20orf24A0A0A6YYL0 155 aa8.84□□□□□ -0.99
CCDC78-209ENST00000474647 IGKV2-24A0A0C4DH68 120 aa8.84□□□□□ -0.99
CCDC78-209ENST00000474647 C1orf196B1AJZ1 125 aa8.84□□□□□ -0.99
CCDC78-209ENST00000474647 UBE2L6O14933 153 aa8.84□□□□□ -0.99
CCDC78-209ENST00000474647 COX19Q49B96 90 aa8.84□□□□□ -0.99
CCDC78-209ENST00000474647 FAM104BQ5XKR9 115 aa8.84□□□□□ -0.99
CCDC78-209ENST00000474647 IGKV3OR2-268A0A0C4DH90 116 aa8.83□□□□□ -1
CCDC78-209ENST00000474647 M0QY20 66 aa8.83□□□□□ -1
CCDC78-209ENST00000474647 RAB4AP20338 218 aa8.83□□□□□ -1
CCDC78-209ENST00000474647 COX6A2Q02221 97 aa8.83□□□□□ -1
CCDC78-209ENST00000474647 MAJINQ3KP22 176 aa8.83□□□□□ -1
CCDC78-209ENST00000474647 TMEM136Q6ZRR5 245 aa8.83□□□□□ -1
CCDC78-209ENST00000474647 PLAC8Q9NZF1 115 aa8.83□□□□□ -1
CCDC78-209ENST00000474647 A0A1B0GUV1 79 aa8.82□□□□□ -1
CCDC78-209ENST00000474647 RAB5BP61020 215 aa8.82□□□□□ -1
CCDC78-209ENST00000474647 MRPL51Q4U2R6 128 aaKnown RBP8.82□□□□□ -1
CCDC78-209ENST00000474647 HIGD2BQ4VC39 106 aa8.82□□□□□ -1
CCDC78-209ENST00000474647 C15orf56Q8N910 161 aa8.82□□□□□ -1
CCDC78-209ENST00000474647 MRAP2Q96G30 205 aa8.82□□□□□ -1
CCDC78-209ENST00000474647 GNB1LQ9BYB4 327 aa8.82□□□□□ -1
CCDC78-209ENST00000474647 TRAV26-2A0A0B4J265 109 aa8.81□□□□□ -1
CCDC78-209ENST00000474647 GAGE12HA6NDE8 117 aa8.81□□□□□ -1
CCDC78-209ENST00000474647 MT-ND6P03923 174 aa8.81□□□□□ -1
CCDC78-209ENST00000474647 PRR3P79522 188 aaKnown RBP8.81□□□□□ -1
CCDC78-209ENST00000474647 LINC01600Q96MT4 127 aa8.81□□□□□ -1
CCDC78-209ENST00000474647 RPS10P46783 165 aaKnown RBP8.8□□□□□ -1
CCDC78-209ENST00000474647 AMTP48728 403 aa8.8□□□□□ -1
CCDC78-209ENST00000474647 CFAP161Q6P656 301 aa8.8□□□□□ -1
CCDC78-209ENST00000474647 STPG4Q8N801 248 aa8.8□□□□□ -1
CCDC78-209ENST00000474647 PRSS3P2Q8NHM4 247 aa8.8□□□□□ -1
CCDC78-209ENST00000474647 NCR2O95944 276 aa8.79□□□□□ -1
CCDC78-209ENST00000474647 NIT2Q9NQR4 276 aa8.79□□□□□ -1
CCDC78-209ENST00000474647 D6R8Y8 96 aa8.78□□□□□ -1
CCDC78-209ENST00000474647 SMKR1H3BMG3 65 aa8.78□□□□□ -1
CCDC78-209ENST00000474647 GAS8-AS1O95177 125 aa8.78□□□□□ -1
CCDC78-209ENST00000474647 PPBPP02775 128 aa8.78□□□□□ -1
CCDC78-209ENST00000474647 COTL1Q14019 142 aa8.78□□□□□ -1
CCDC78-209ENST00000474647 RPL39LQ96EH5 51 aaKnown RBP8.78□□□□□ -1
CCDC78-209ENST00000474647 TRBV6-5A0A0K0K1A5 114 aa8.77□□□□□ -1.01
CCDC78-209ENST00000474647 APCSP02743 223 aa8.77□□□□□ -1.01
CCDC78-209ENST00000474647 CKS2P33552 79 aa8.77□□□□□ -1.01
CCDC78-209ENST00000474647 SNRPEP62304 92 aaKnown RBP8.77□□□□□ -1.01
CCDC78-209ENST00000474647 ORMDL3Q8N138 153 aa8.77□□□□□ -1.01
CCDC78-209ENST00000474647 NRACQ8N912 160 aa8.77□□□□□ -1.01
CCDC78-209ENST00000474647 MRPL18Q9H0U6 180 aaKnown RBP8.77□□□□□ -1.01
CCDC78-209ENST00000474647 A0A096LNI7 61 aa8.76□□□□□ -1.01
CCDC78-209ENST00000474647 A0A0J9YXV3 536 aa8.76□□□□□ -1.01
CCDC78-209ENST00000474647 C5orf52A6NGY3 159 aa8.76□□□□□ -1.01
CCDC78-209ENST00000474647 PPP1R17O96001 155 aa8.76□□□□□ -1.01
CCDC78-209ENST00000474647 AMMECR1LQ6DCA0 310 aa8.76□□□□□ -1.01
CCDC78-209ENST00000474647 CHCHD10Q8WYQ3 142 aaPredicted RBP8.76□□□□□ -1.01
CCDC78-209ENST00000474647 LAMTOR2Q9Y2Q5 125 aa8.76□□□□□ -1.01
CCDC78-209ENST00000474647 TRAPPC1Q9Y5R8 145 aa8.76□□□□□ -1.01
CCDC78-209ENST00000474647 REG3GQ6UW15 175 aa8.75□□□□□ -1.01
CCDC78-209ENST00000474647 PRELID3AQ96N28 172 aa8.75□□□□□ -1.01
CCDC78-209ENST00000474647 TNFRSF6BO95407 300 aa8.74□□□□□ -1.01
CCDC78-209ENST00000474647 NPYP01303 97 aa8.74□□□□□ -1.01
CCDC78-209ENST00000474647 TRGC2P03986 189 aa8.74□□□□□ -1.01
CCDC78-209ENST00000474647 FABP9Q0Z7S8 132 aa8.74□□□□□ -1.01
CCDC78-209ENST00000474647 KIAA1644Q3SXP7 199 aa8.74□□□□□ -1.01
CCDC78-209ENST00000474647 RNASEKQ6P5S7 137 aaKnown RBP8.74□□□□□ -1.01
CCDC78-209ENST00000474647 ST20Q9HBF5 79 aa8.74□□□□□ -1.01
CCDC78-209ENST00000474647 GVQW2A0A096LPI5 108 aaPredicted RBP8.73□□□□□ -1.01
CCDC78-209ENST00000474647 SDHAF1A6NFY7 115 aa8.73□□□□□ -1.01
CCDC78-209ENST00000474647 S100A6P06703 90 aa8.73□□□□□ -1.01
CCDC78-209ENST00000474647 SUMO2P61956 95 aaKnown RBP8.73□□□□□ -1.01
CCDC78-209ENST00000474647 RPL32P62910 135 aaKnown RBP8.73□□□□□ -1.01
CCDC78-209ENST00000474647 SPINK6Q6UWN8 80 aa8.73□□□□□ -1.01
CCDC78-209ENST00000474647 C20orf78Q9BR46 151 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms