RNA–Protein interactions for RNA: ENST00000474305.2

CASP9-209, Transcript of caspase 9, humanhuman

TSL 1 (best)

Gene CASP9, Length 1,111 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9-209ENST00000474305 TRAV8-4A0A0B4J246 113 aa12.28□□□□□ -0.44
CASP9-209ENST00000474305 OR5A1Q8NGJ0 315 aa12.28□□□□□ -0.44
CASP9-209ENST00000474305 CDC42SE2Q9NRR3 84 aa12.28□□□□□ -0.44
CASP9-209ENST00000474305 UBE2D4Q9Y2X8 147 aa12.28□□□□□ -0.44
CASP9-209ENST00000474305 PKHD1P08F94 4074 aa12.28□□□□□ -0.44
CASP9-209ENST00000474305 IFI27P40305 119 aaPredicted RBP12.27□□□□□ -0.45
CASP9-209ENST00000474305 KRTAP26-1Q6PEX3 210 aa12.27□□□□□ -0.45
CASP9-209ENST00000474305 CLPSL2Q6UWE3 100 aa12.27□□□□□ -0.45
CASP9-209ENST00000474305 EREGO14944 169 aa12.26□□□□□ -0.45
CASP9-209ENST00000474305 DGAT2L7PQ6IED9 249 aa12.26□□□□□ -0.45
CASP9-209ENST00000474305 ZNF664Q8N3J9 261 aa12.26□□□□□ -0.45
CASP9-209ENST00000474305 RPL39P62891 51 aaKnown RBP12.25□□□□□ -0.45
CASP9-209ENST00000474305 ORMDL2Q53FV1 153 aa12.25□□□□□ -0.45
CASP9-209ENST00000474305 LINC01546A6NGU7 62 aa12.24□□□□□ -0.45
CASP9-209ENST00000474305 PRSS3P2Q8NHM4 247 aa12.23□□□□□ -0.45
CASP9-209ENST00000474305 BAALCQ8WXS3 180 aa12.23□□□□□ -0.45
CASP9-209ENST00000474305 SPANXA1Q9NS26 97 aa12.23□□□□□ -0.45
CASP9-209ENST00000474305 PYGO1Q9Y3Y4 419 aa12.23□□□□□ -0.45
CASP9-209ENST00000474305 SPATA12Q7Z6I5 190 aa12.22□□□□□ -0.45
CASP9-209ENST00000474305 FAM104AQ969W3 186 aa12.22□□□□□ -0.45
CASP9-209ENST00000474305 PGPEP1Q9NXJ5 209 aa12.22□□□□□ -0.45
CASP9-209ENST00000474305 IGLV10-54A0A075B6I4 117 aa12.21□□□□□ -0.45
CASP9-209ENST00000474305 COLCA2A8K830 154 aa12.21□□□□□ -0.45
CASP9-209ENST00000474305 G0S2P27469 103 aa12.21□□□□□ -0.45
CASP9-209ENST00000474305 KRTAP10-2P60368 255 aa12.21□□□□□ -0.45
CASP9-209ENST00000474305 MRPS36P82909 103 aaKnown RBP12.21□□□□□ -0.45
CASP9-209ENST00000474305 WFDC2Q14508 124 aa12.21□□□□□ -0.45
CASP9-209ENST00000474305 DYNC1H1Q14204 4646 aaKnown RBP12.21□□□□□ -0.45
CASP9-209ENST00000474305 DNAH5Q8TE73 4624 aa12.21□□□□□ -0.45
CASP9-209ENST00000474305 LINC00959A0A1B0GUT2 108 aa12.2□□□□□ -0.46
CASP9-209ENST00000474305 Q8N814 137 aa12.2□□□□□ -0.46
CASP9-209ENST00000474305 C18orf32Q8TCD1 76 aa12.2□□□□□ -0.46
CASP9-209ENST00000474305 CYSLTR1Q9Y271 337 aa12.2□□□□□ -0.46
CASP9-209ENST00000474305 BIRC6Q9NR09 4857 aa12.19□□□□□ -0.46
CASP9-209ENST00000474305 IGKV3OR2-268A0A0C4DH90 116 aa12.19□□□□□ -0.46
CASP9-209ENST00000474305 CCL25O15444 150 aa12.19□□□□□ -0.46
CASP9-209ENST00000474305 C2orf66Q6UXQ4 117 aa12.19□□□□□ -0.46
CASP9-209ENST00000474305 Q6ZUT4 128 aa12.18□□□□□ -0.46
CASP9-209ENST00000474305 CHCHD10Q8WYQ3 142 aaPredicted RBP12.18□□□□□ -0.46
CASP9-209ENST00000474305 LECT2O14960 151 aa12.17□□□□□ -0.46
CASP9-209ENST00000474305 NPSP0C0P6 89 aa12.17□□□□□ -0.46
CASP9-209ENST00000474305 SS18Q15532 418 aa12.17□□□□□ -0.46
CASP9-209ENST00000474305 CDPF1Q6NVV7 123 aa12.17□□□□□ -0.46
CASP9-209ENST00000474305 OPRPNQ99935 248 aaPredicted RBP12.17□□□□□ -0.46
CASP9-209ENST00000474305 GAGE12HA6NDE8 117 aa12.16□□□□□ -0.46
CASP9-209ENST00000474305 IGIPA6NJ69 53 aa12.16□□□□□ -0.46
CASP9-209ENST00000474305 RNASE13Q5GAN3 156 aaKnown RBP12.16□□□□□ -0.46
CASP9-209ENST00000474305 FA2HQ7L5A8 372 aa12.16□□□□□ -0.46
CASP9-209ENST00000474305 NTN5Q8WTR8 489 aaPredicted RBP12.16□□□□□ -0.46
CASP9-209ENST00000474305 TOMM6Q96B49 74 aa12.16□□□□□ -0.46
CASP9-209ENST00000474305 IGLV4-3A0A075B6K6 122 aa12.15□□□□□ -0.46
CASP9-209ENST00000474305 LINC01549A6NIU2 74 aa12.15□□□□□ -0.46
CASP9-209ENST00000474305 C1orf196B1AJZ1 125 aa12.15□□□□□ -0.46
CASP9-209ENST00000474305 SCO1O75880 301 aa12.15□□□□□ -0.46
CASP9-209ENST00000474305 LINC00614P0C842 121 aa12.15□□□□□ -0.46
CASP9-209ENST00000474305 C14orf177Q52M58 125 aa12.15□□□□□ -0.46
CASP9-209ENST00000474305 URB1-AS1Q96HZ7 61 aa12.15□□□□□ -0.46
CASP9-209ENST00000474305 USP17L23D6RBM5 183 aa12.14□□□□□ -0.47
CASP9-209ENST00000474305 TRGC2P03986 189 aa12.14□□□□□ -0.47
CASP9-209ENST00000474305 FOXI1Q12951 378 aa12.14□□□□□ -0.47
CASP9-209ENST00000474305 CD164L2Q6UWJ8 174 aa12.14□□□□□ -0.47
CASP9-209ENST00000474305 TMEM141Q96I45 108 aa12.14□□□□□ -0.47
CASP9-209ENST00000474305 AP5S1Q9NUS5 200 aa12.14□□□□□ -0.47
CASP9-209ENST00000474305 LRP1BQ9NZR2 4599 aa12.13□□□□□ -0.47
CASP9-209ENST00000474305 C16orf90A8MZG2 172 aa12.13□□□□□ -0.47
CASP9-209ENST00000474305 S100A1P23297 94 aa12.13□□□□□ -0.47
CASP9-209ENST00000474305 RAB5BP61020 215 aa12.13□□□□□ -0.47
CASP9-209ENST00000474305 TIMM17AQ99595 171 aa12.13□□□□□ -0.47
CASP9-209ENST00000474305 TRAV13-1A0A0B4J241 112 aa12.12□□□□□ -0.47
CASP9-209ENST00000474305 XCL1P47992 114 aa12.12□□□□□ -0.47
CASP9-209ENST00000474305 ERASQ7Z444 233 aa12.12□□□□□ -0.47
CASP9-209ENST00000474305 FUSP35637 526 aaKnown RBP eCLIP12.11□□□□□ -0.47
CASP9-209ENST00000474305 AMELXQ99217 191 aa12.11□□□□□ -0.47
CASP9-209ENST00000474305 CFAP161Q6P656 301 aa12.1□□□□□ -0.47
CASP9-209ENST00000474305 VCX2Q9H322 139 aa12.1□□□□□ -0.47
CASP9-209ENST00000474305 IGLV5-52A0A0A0MRZ9 124 aa12.09□□□□□ -0.47
CASP9-209ENST00000474305 PRSS1P07477 247 aa12.09□□□□□ -0.47
CASP9-209ENST00000474305 PAPPA-AS1Q5QFB9 102 aa12.09□□□□□ -0.47
CASP9-209ENST00000474305 Q6ZN92 141 aa12.09□□□□□ -0.47
CASP9-209ENST00000474305 TEX43Q6ZNM6 134 aa12.09□□□□□ -0.47
CASP9-209ENST00000474305 SCGB3A1Q96QR1 104 aa12.09□□□□□ -0.47
CASP9-209ENST00000474305 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.08□□□□□ -0.48
CASP9-209ENST00000474305 A0A096LNJ9 63 aa12.08□□□□□ -0.48
CASP9-209ENST00000474305 IFITM10A6NMD0 228 aa12.08□□□□□ -0.48
CASP9-209ENST00000474305 LINC00173Q6ZV60 143 aa12.08□□□□□ -0.48
CASP9-209ENST00000474305 C15orf56Q8N910 161 aa12.08□□□□□ -0.48
CASP9-209ENST00000474305 CHCHD1Q96BP2 118 aaKnown RBP12.08□□□□□ -0.48
CASP9-209ENST00000474305 ATP6V1G1O75348 118 aa12.07□□□□□ -0.48
CASP9-209ENST00000474305 GCSHP23434 173 aa12.07□□□□□ -0.48
CASP9-209ENST00000474305 UBE2D1P51668 147 aa12.06□□□□□ -0.48
CASP9-209ENST00000474305 FAM19A3Q7Z5A8 133 aa12.06□□□□□ -0.48
CASP9-209ENST00000474305 C2orf88Q9BSF0 95 aa12.06□□□□□ -0.48
CASP9-209ENST00000474305 IGHV3OR16-9A0A0B4J2B5 98 aa12.05□□□□□ -0.48
CASP9-209ENST00000474305 IGHV1-58A0A0C4DH39 117 aa12.05□□□□□ -0.48
CASP9-209ENST00000474305 HBDP02042 147 aa12.05□□□□□ -0.48
CASP9-209ENST00000474305 LINC00242Q5T6M2 205 aa12.05□□□□□ -0.48
CASP9-209ENST00000474305 ZC2HC1BQ5TFG8 222 aa12.05□□□□□ -0.48
CASP9-209ENST00000474305 hDV102S1A0JD36 115 aa12.04□□□□□ -0.48
CASP9-209ENST00000474305 COX7A2LO14548 114 aa12.04□□□□□ -0.48
CASP9-209ENST00000474305 PDZD11Q5EBL8 140 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms