RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 FAM25GB3EWG6 89 aa-0.51□□□□□ -2.49
ECHDC1-213ENST00000474240 F8VRH5 84 aa-0.51□□□□□ -2.49
ECHDC1-213ENST00000474240 SPINK4O60575 86 aa-0.51□□□□□ -2.49
ECHDC1-213ENST00000474240 PAPPAQ13219 1627 aa-0.51□□□□□ -2.49
ECHDC1-213ENST00000474240 KIF21AQ7Z4S6 1674 aa-0.51□□□□□ -2.49
ECHDC1-213ENST00000474240 PKD1L1Q8TDX9 2849 aa-0.51□□□□□ -2.49
ECHDC1-213ENST00000474240 MGST2Q99735 147 aa-0.51□□□□□ -2.49
ECHDC1-213ENST00000474240 FXYD6Q9H0Q3 95 aa-0.51□□□□□ -2.49
ECHDC1-213ENST00000474240 DYNLRB1Q9NP97 96 aa-0.51□□□□□ -2.49
ECHDC1-213ENST00000474240 SHANK2Q9UPX8 1470 aa-0.51□□□□□ -2.49
ECHDC1-213ENST00000474240 LRP2P98164 4655 aa-0.52□□□□□ -2.49
ECHDC1-213ENST00000474240 LPAP08519 4548 aa-0.52□□□□□ -2.49
ECHDC1-213ENST00000474240 CSMD3Q7Z407 3707 aa-0.52□□□□□ -2.49
ECHDC1-213ENST00000474240 ARAP2Q8WZ64 1704 aa-0.52□□□□□ -2.49
ECHDC1-213ENST00000474240 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.52□□□□□ -2.49
ECHDC1-213ENST00000474240 NAIPQ13075 1403 aa-0.52□□□□□ -2.49
ECHDC1-213ENST00000474240 TNXBP22105 4242 aa-0.52□□□□□ -2.49
ECHDC1-213ENST00000474240 SRRM2Q9UQ35 2752 aaKnown RBP-0.52□□□□□ -2.49
ECHDC1-213ENST00000474240 HIST1H1DP16402 221 aaKnown RBP-0.52□□□□□ -2.49
ECHDC1-213ENST00000474240 KRTAP19-7Q3SYF9 63 aa-0.52□□□□□ -2.49
ECHDC1-213ENST00000474240 DPH3Q96FX2 82 aa-0.52□□□□□ -2.49
ECHDC1-213ENST00000474240 TSC2P49815 1807 aa-0.52□□□□□ -2.49
ECHDC1-213ENST00000474240 I3L2K1 104 aa-0.53□□□□□ -2.49
ECHDC1-213ENST00000474240 PPP3R2Q96LZ3 170 aa-0.53□□□□□ -2.49
ECHDC1-213ENST00000474240 SDF2Q99470 211 aa-0.53□□□□□ -2.49
ECHDC1-213ENST00000474240 RERGLQ9H628 205 aa-0.53□□□□□ -2.49
ECHDC1-213ENST00000474240 NAA60Q9H7X0 242 aa-0.53□□□□□ -2.49
ECHDC1-213ENST00000474240 FAIMQ9NVQ4 179 aa-0.53□□□□□ -2.49
ECHDC1-213ENST00000474240 SERP1Q9Y6X1 66 aa-0.53□□□□□ -2.49
ECHDC1-213ENST00000474240 SPTBN1Q01082 2364 aaKnown RBP-0.53□□□□□ -2.49
ECHDC1-213ENST00000474240 PI4KAP42356 2102 aa-0.53□□□□□ -2.49
ECHDC1-213ENST00000474240 PATJQ8NI35 1801 aa-0.54□□□□□ -2.5
ECHDC1-213ENST00000474240 SPRR2BP35325 72 aa-0.54□□□□□ -2.5
ECHDC1-213ENST00000474240 Q6AWC8 147 aa-0.54□□□□□ -2.5
ECHDC1-213ENST00000474240 AMELXQ99217 191 aa-0.54□□□□□ -2.5
ECHDC1-213ENST00000474240 VWFP04275 2813 aa-0.54□□□□□ -2.5
ECHDC1-213ENST00000474240 FAT1Q14517 4588 aa-0.54□□□□□ -2.5
ECHDC1-213ENST00000474240 POLA1P09884 1462 aaPredicted RBP-0.54□□□□□ -2.5
ECHDC1-213ENST00000474240 UNC13AQ9UPW8 1703 aa-0.55□□□□□ -2.5
ECHDC1-213ENST00000474240 ARL11Q969Q4 196 aa-0.55□□□□□ -2.5
ECHDC1-213ENST00000474240 NDUFA4L2Q9NRX3 87 aa-0.55□□□□□ -2.5
ECHDC1-213ENST00000474240 USF3Q68DE3 2245 aa-0.55□□□□□ -2.5
ECHDC1-213ENST00000474240 RYR2Q92736 4967 aa-0.55□□□□□ -2.5
ECHDC1-213ENST00000474240 LAMC1P11047 1609 aa-0.56□□□□□ -2.5
ECHDC1-213ENST00000474240 KMT2AQ03164 3969 aa-0.56□□□□□ -2.5
ECHDC1-213ENST00000474240 TEP1Q99973 2627 aaKnown RBP-0.56□□□□□ -2.5
ECHDC1-213ENST00000474240 MGPP08493 103 aa-0.56□□□□□ -2.5
ECHDC1-213ENST00000474240 MT4P47944 62 aa-0.56□□□□□ -2.5
ECHDC1-213ENST00000474240 Q8N8P6 123 aa-0.56□□□□□ -2.5
ECHDC1-213ENST00000474240 SNRNP25Q9BV90 132 aaKnown RBP-0.56□□□□□ -2.5
ECHDC1-213ENST00000474240 MYO7BQ6PIF6 2116 aa-0.56□□□□□ -2.5
ECHDC1-213ENST00000474240 RAPGEF6Q8TEU7 1601 aa-0.56□□□□□ -2.5
ECHDC1-213ENST00000474240 DCHS2Q6V1P9 2916 aa-0.57□□□□□ -2.5
ECHDC1-213ENST00000474240 ARHGEF12Q9NZN5 1544 aa-0.57□□□□□ -2.5
ECHDC1-213ENST00000474240 TRBV7-3A0A075B6L6 115 aa-0.57□□□□□ -2.5
ECHDC1-213ENST00000474240 IGLC7A0M8Q6 106 aa-0.57□□□□□ -2.5
ECHDC1-213ENST00000474240 MYOZ3Q8TDC0 251 aa-0.57□□□□□ -2.5
ECHDC1-213ENST00000474240 UQCR10Q9UDW1 63 aa-0.57□□□□□ -2.5
ECHDC1-213ENST00000474240 CSPG4Q6UVK1 2322 aa-0.57□□□□□ -2.5
ECHDC1-213ENST00000474240 HIVEP1P15822 2718 aa-0.57□□□□□ -2.5
ECHDC1-213ENST00000474240 ZNF236Q9UL36 1845 aa-0.57□□□□□ -2.5
ECHDC1-213ENST00000474240 CHD6Q8TD26 2715 aa-0.58□□□□□ -2.5
ECHDC1-213ENST00000474240 DOCK1Q14185 1865 aa-0.58□□□□□ -2.5
ECHDC1-213ENST00000474240 RIMS1Q86UR5 1692 aaKnown RBP-0.58□□□□□ -2.5
ECHDC1-213ENST00000474240 GAPVD1Q14C86 1478 aa-0.58□□□□□ -2.5
ECHDC1-213ENST00000474240 SPTBN4Q9H254 2564 aa-0.58□□□□□ -2.5
ECHDC1-213ENST00000474240 MIF4GDA9UHW6 222 aaKnown RBP-0.58□□□□□ -2.5
ECHDC1-213ENST00000474240 SYS1-DBNDD2H3BUS1 97 aa-0.58□□□□□ -2.5
ECHDC1-213ENST00000474240 SFT2D2O95562 160 aa-0.58□□□□□ -2.5
ECHDC1-213ENST00000474240 IFNGP01579 166 aa-0.58□□□□□ -2.5
ECHDC1-213ENST00000474240 SPRR1BP22528 89 aa-0.58□□□□□ -2.5
ECHDC1-213ENST00000474240 WHAMMP3Q1A5X7 153 aa-0.58□□□□□ -2.5
ECHDC1-213ENST00000474240 C8orf59Q8N0T1 100 aaPredicted RBP-0.58□□□□□ -2.5
ECHDC1-213ENST00000474240 LINC01558Q9Y6Z2 57 aa-0.58□□□□□ -2.5
ECHDC1-213ENST00000474240 TENM2Q9NT68 2774 aa-0.58□□□□□ -2.5
ECHDC1-213ENST00000474240 SETD2Q9BYW2 2564 aaPredicted RBP-0.58□□□□□ -2.5
ECHDC1-213ENST00000474240 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.59□□□□□ -2.5
ECHDC1-213ENST00000474240 CREBBPQ92793 2442 aa-0.59□□□□□ -2.5
ECHDC1-213ENST00000474240 SELENOWP63302 87 aa-0.59□□□□□ -2.5
ECHDC1-213ENST00000474240 Q56UQ5 140 aa-0.59□□□□□ -2.5
ECHDC1-213ENST00000474240 NF1P21359 2839 aa-0.59□□□□□ -2.5
ECHDC1-213ENST00000474240 ABCA13Q86UQ4 5058 aa-0.59□□□□□ -2.5
ECHDC1-213ENST00000474240 CPSF1Q10570 1443 aaKnown RBP-0.6□□□□□ -2.51
ECHDC1-213ENST00000474240 TRBV7-4A0A0J9YYF1 115 aa-0.6□□□□□ -2.51
ECHDC1-213ENST00000474240 HMGN4O00479 90 aa-0.6□□□□□ -2.51
ECHDC1-213ENST00000474240 SSSCA1O60232 199 aa-0.6□□□□□ -2.51
ECHDC1-213ENST00000474240 APOC2P02655 101 aa-0.6□□□□□ -2.51
ECHDC1-213ENST00000474240 COX8AP10176 69 aa-0.6□□□□□ -2.51
ECHDC1-213ENST00000474240 MAP1BP46821 2468 aaKnown RBP-0.6□□□□□ -2.51
ECHDC1-213ENST00000474240 APC2O95996 2303 aa-0.6□□□□□ -2.51
ECHDC1-213ENST00000474240 SETXQ7Z333 2677 aaKnown RBP-0.61□□□□□ -2.51
ECHDC1-213ENST00000474240 UBA52P62987 128 aaKnown RBP-0.61□□□□□ -2.51
ECHDC1-213ENST00000474240 KRTAP19-8Q3LI54 63 aa-0.61□□□□□ -2.51
ECHDC1-213ENST00000474240 CCDC58Q4VC31 144 aa-0.61□□□□□ -2.51
ECHDC1-213ENST00000474240 MEIG1Q5JSS6 88 aa-0.61□□□□□ -2.51
ECHDC1-213ENST00000474240 MRPL54Q6P161 138 aaKnown RBP-0.61□□□□□ -2.51
ECHDC1-213ENST00000474240 DEFB123Q8N688 67 aa-0.61□□□□□ -2.51
ECHDC1-213ENST00000474240 USMG5Q96IX5 58 aa-0.61□□□□□ -2.51
ECHDC1-213ENST00000474240 LINC00472Q9H8W2 130 aa-0.61□□□□□ -2.51
ECHDC1-213ENST00000474240 ALMS1Q8TCU4 4167 aa-0.61□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms