RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 FA2HQ7L5A8 372 aa13.46□□□□□ -0.25
APP-215ENST00000474136 Q8N814 137 aa13.46□□□□□ -0.25
APP-215ENST00000474136 DEFB104AQ8WTQ1 72 aa13.46□□□□□ -0.25
APP-215ENST00000474136 LINC00614P0C842 121 aa13.45□□□□□ -0.26
APP-215ENST00000474136 G0S2P27469 103 aa13.45□□□□□ -0.26
APP-215ENST00000474136 CHCHD1Q96BP2 118 aaKnown RBP13.45□□□□□ -0.26
APP-215ENST00000474136 S100A6P06703 90 aa13.44□□□□□ -0.26
APP-215ENST00000474136 IFI27P40305 119 aaPredicted RBP13.44□□□□□ -0.26
APP-215ENST00000474136 C10orf126Q8N4M7 172 aa13.44□□□□□ -0.26
APP-215ENST00000474136 ATP6V0E2Q8NHE4 81 aa13.44□□□□□ -0.26
APP-215ENST00000474136 Q9UF83 564 aa13.44□□□□□ -0.26
APP-215ENST00000474136 LOC100131303A0A0U1RQF7 123 aa13.43□□□□□ -0.26
APP-215ENST00000474136 LINC00694P0DN24 101 aa13.43□□□□□ -0.26
APP-215ENST00000474136 COTL1Q14019 142 aa13.43□□□□□ -0.26
APP-215ENST00000474136 COA6Q5JTJ3 125 aaKnown RBP13.43□□□□□ -0.26
APP-215ENST00000474136 NIT1Q86X76 327 aa13.43□□□□□ -0.26
APP-215ENST00000474136 AP5S1Q9NUS5 200 aa13.43□□□□□ -0.26
APP-215ENST00000474136 LINC01546A6NGU7 62 aa13.42□□□□□ -0.26
APP-215ENST00000474136 FCER1GP30273 86 aa13.42□□□□□ -0.26
APP-215ENST00000474136 IQCJQ1A5X6 159 aa13.42□□□□□ -0.26
APP-215ENST00000474136 ORMDL2Q53FV1 153 aa13.42□□□□□ -0.26
APP-215ENST00000474136 GTSF1LQ9H1H1 148 aa13.42□□□□□ -0.26
APP-215ENST00000474136 NDUFA6P56556 154 aa13.41□□□□□ -0.26
APP-215ENST00000474136 Q9HAA7 133 aa13.41□□□□□ -0.26
APP-215ENST00000474136 LINC01549A6NIU2 74 aa13.4□□□□□ -0.26
APP-215ENST00000474136 LAGE3Q14657 143 aa13.4□□□□□ -0.26
APP-215ENST00000474136 Q6ZSA8 131 aa13.4□□□□□ -0.26
APP-215ENST00000474136 PLA2G2DQ9UNK4 145 aa13.4□□□□□ -0.26
APP-215ENST00000474136 HSBP1O75506 76 aa13.39□□□□□ -0.27
APP-215ENST00000474136 TIRAPP58753 221 aa13.39□□□□□ -0.27
APP-215ENST00000474136 RNASEKQ6P5S7 137 aaKnown RBP13.39□□□□□ -0.27
APP-215ENST00000474136 WFDC2Q14508 124 aa13.39□□□□□ -0.27
APP-215ENST00000474136 IGHV3-38A0A0C4DH36 116 aa13.38□□□□□ -0.27
APP-215ENST00000474136 SERF1AO75920 110 aa13.38□□□□□ -0.27
APP-215ENST00000474136 TSHBP01222 138 aa13.38□□□□□ -0.27
APP-215ENST00000474136 ESDP10768 282 aa13.38□□□□□ -0.27
APP-215ENST00000474136 TMEM18Q96B42 140 aa13.38□□□□□ -0.27
APP-215ENST00000474136 TRBV25-1A0A075B6N4 114 aa13.37□□□□□ -0.27
APP-215ENST00000474136 IBA57-AS1B1ANH7 110 aa13.37□□□□□ -0.27
APP-215ENST00000474136 SMAGPQ0VAQ4 97 aa13.37□□□□□ -0.27
APP-215ENST00000474136 TRBV6-8A0A0A6YYG3 113 aa13.36□□□□□ -0.27
APP-215ENST00000474136 IGHV1-24A0A0C4DH33 117 aa13.36□□□□□ -0.27
APP-215ENST00000474136 AMTP48728 403 aa13.36□□□□□ -0.27
APP-215ENST00000474136 LINC01556Q5JQF7 62 aa13.36□□□□□ -0.27
APP-215ENST00000474136 URB1-AS1Q96HZ7 61 aa13.36□□□□□ -0.27
APP-215ENST00000474136 KRTAP10-4P60372 401 aaPredicted RBP13.35□□□□□ -0.27
APP-215ENST00000474136 TMA7Q9Y2S6 64 aaKnown RBP13.35□□□□□ -0.27
APP-215ENST00000474136 H7C423 109 aa13.34□□□□□ -0.27
APP-215ENST00000474136 IGHV3-30P01768 117 aa13.33□□□□□ -0.28
APP-215ENST00000474136 IGHV3-33P01772 117 aa13.33□□□□□ -0.28
APP-215ENST00000474136 IGHV3-30-3P0DP02 117 aa13.33□□□□□ -0.28
APP-215ENST00000474136 IGHV3-30-5P0DP03 117 aa13.33□□□□□ -0.28
APP-215ENST00000474136 PKIAP61925 76 aa13.33□□□□□ -0.28
APP-215ENST00000474136 LELP1Q5T871 98 aa13.33□□□□□ -0.28
APP-215ENST00000474136 TMEM243Q9BU79 118 aa13.33□□□□□ -0.28
APP-215ENST00000474136 HBDP02042 147 aa13.32□□□□□ -0.28
APP-215ENST00000474136 LINC01620Q4KN68 170 aa13.32□□□□□ -0.28
APP-215ENST00000474136 NTM-AS1Q6ZSK4 140 aa13.32□□□□□ -0.28
APP-215ENST00000474136 SCXQ7RTU7 201 aa13.32□□□□□ -0.28
APP-215ENST00000474136 C20orf203Q8NBC4 194 aa13.32□□□□□ -0.28
APP-215ENST00000474136 PACRGQ96M98 296 aaPredicted RBP13.32□□□□□ -0.28
APP-215ENST00000474136 CYSLTR1Q9Y271 337 aa13.32□□□□□ -0.28
APP-215ENST00000474136 PKHD1L1Q86WI1 4243 aa13.31□□□□□ -0.28
APP-215ENST00000474136 C5orf52A6NGY3 159 aa13.31□□□□□ -0.28
APP-215ENST00000474136 LECT2O14960 151 aa13.31□□□□□ -0.28
APP-215ENST00000474136 OXTP01178 125 aa13.31□□□□□ -0.28
APP-215ENST00000474136 LINC00310P59036 64 aa13.31□□□□□ -0.28
APP-215ENST00000474136 TRAV8-6A0A0B4J262 113 aa13.3□□□□□ -0.28
APP-215ENST00000474136 UBE2L6O14933 153 aa13.3□□□□□ -0.28
APP-215ENST00000474136 S100A2P29034 98 aa13.3□□□□□ -0.28
APP-215ENST00000474136 SNRPEP62304 92 aaKnown RBP13.3□□□□□ -0.28
APP-215ENST00000474136 CHCHD7Q9BUK0 85 aa13.3□□□□□ -0.28
APP-215ENST00000474136 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.29□□□□□ -0.28
APP-215ENST00000474136 NUPR1O60356 82 aa13.29□□□□□ -0.28
APP-215ENST00000474136 C2orf66Q6UXQ4 117 aa13.29□□□□□ -0.28
APP-215ENST00000474136 TOMM6Q96B49 74 aa13.29□□□□□ -0.28
APP-215ENST00000474136 NPSP0C0P6 89 aa13.28□□□□□ -0.28
APP-215ENST00000474136 CHCHD5Q9BSY4 110 aa13.28□□□□□ -0.28
APP-215ENST00000474136 TIMM21Q9BVV7 248 aa13.28□□□□□ -0.28
APP-215ENST00000474136 FAM19A2Q8N3H0 131 aa13.27□□□□□ -0.29
APP-215ENST00000474136 HSPB8Q9UJY1 196 aa13.27□□□□□ -0.29
APP-215ENST00000474136 ATP5LO75964 103 aa13.26□□□□□ -0.29
APP-215ENST00000474136 ZNF25P17030 456 aaPredicted RBP13.26□□□□□ -0.29
APP-215ENST00000474136 ERASQ7Z444 233 aa13.26□□□□□ -0.29
APP-215ENST00000474136 MRPL52Q86TS9 123 aaKnown RBP13.26□□□□□ -0.29
APP-215ENST00000474136 HIST3H2BBQ8N257 126 aa13.26□□□□□ -0.29
APP-215ENST00000474136 Q8N3U1 123 aa13.26□□□□□ -0.29
APP-215ENST00000474136 SPANXA1Q9NS26 97 aa13.26□□□□□ -0.29
APP-215ENST00000474136 PYGO1Q9Y3Y4 419 aa13.26□□□□□ -0.29
APP-215ENST00000474136 CSDC2Q9Y534 153 aaKnown RBP13.26□□□□□ -0.29
APP-215ENST00000474136 LEPROTL1O95214 131 aa13.25□□□□□ -0.29
APP-215ENST00000474136 PMCHL1Q16048 86 aa13.25□□□□□ -0.29
APP-215ENST00000474136 PAPPA-AS1Q5QFB9 102 aa13.25□□□□□ -0.29
APP-215ENST00000474136 AMMECR1LQ6DCA0 310 aa13.25□□□□□ -0.29
APP-215ENST00000474136 TMEM141Q96I45 108 aa13.25□□□□□ -0.29
APP-215ENST00000474136 SCGB3A1Q96QR1 104 aa13.25□□□□□ -0.29
APP-215ENST00000474136 TM2D2Q9BX73 214 aa13.25□□□□□ -0.29
APP-215ENST00000474136 A0A096LNJ9 63 aa13.24□□□□□ -0.29
APP-215ENST00000474136 PDZD11Q5EBL8 140 aa13.24□□□□□ -0.29
APP-215ENST00000474136 DGAT2L7PQ6IED9 249 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms