RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 LOC389332A0A1B0GUA5 103 aa9.1□□□□□ -0.95
USF1-205ENST00000473969 MRPL52Q86TS9 123 aaKnown RBP9.1□□□□□ -0.95
USF1-205ENST00000473969 MAPKAPK5-AS1Q8N8E1 139 aa9.1□□□□□ -0.95
USF1-205ENST00000473969 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.09□□□□□ -0.95
USF1-205ENST00000473969 GCSHP23434 173 aa9.09□□□□□ -0.95
USF1-205ENST00000473969 FUSP35637 526 aaKnown RBP eCLIP9.09□□□□□ -0.95
USF1-205ENST00000473969 GNB1LQ9BYB4 327 aa9.09□□□□□ -0.95
USF1-205ENST00000473969 PKD1P98161 4303 aa9.09□□□□□ -0.95
USF1-205ENST00000473969 WFDC2Q14508 124 aa9.08□□□□□ -0.96
USF1-205ENST00000473969 ZNF664Q8N3J9 261 aa9.08□□□□□ -0.96
USF1-205ENST00000473969 PRSS47A8MTI9 375 aa9.07□□□□□ -0.96
USF1-205ENST00000473969 MT-ND6P03923 174 aa9.07□□□□□ -0.96
USF1-205ENST00000473969 SS18Q15532 418 aa9.07□□□□□ -0.96
USF1-205ENST00000473969 CDC42SE2Q9NRR3 84 aa9.07□□□□□ -0.96
USF1-205ENST00000473969 UBE2D4Q9Y2X8 147 aa9.07□□□□□ -0.96
USF1-205ENST00000473969 CSDC2Q9Y534 153 aaKnown RBP9.07□□□□□ -0.96
USF1-205ENST00000473969 GAGE12HA6NDE8 117 aa9.06□□□□□ -0.96
USF1-205ENST00000473969 USP17L23D6RBM5 183 aa9.06□□□□□ -0.96
USF1-205ENST00000473969 KIAA1644Q3SXP7 199 aa9.06□□□□□ -0.96
USF1-205ENST00000473969 CFAP161Q6P656 301 aa9.06□□□□□ -0.96
USF1-205ENST00000473969 Q8N8P6 123 aa9.06□□□□□ -0.96
USF1-205ENST00000473969 TIMM21Q9BVV7 248 aa9.06□□□□□ -0.96
USF1-205ENST00000473969 NXT2Q9NPJ8 142 aaKnown RBP9.06□□□□□ -0.96
USF1-205ENST00000473969 FABP9Q0Z7S8 132 aa9.05□□□□□ -0.96
USF1-205ENST00000473969 ORMDL2Q53FV1 153 aa9.05□□□□□ -0.96
USF1-205ENST00000473969 CHCHD10Q8WYQ3 142 aaPredicted RBP9.05□□□□□ -0.96
USF1-205ENST00000473969 KIAA1109Q2LD37 5005 aa9.04□□□□□ -0.96
USF1-205ENST00000473969 LINC00959A0A1B0GUT2 108 aa9.04□□□□□ -0.96
USF1-205ENST00000473969 K7EMI3 77 aa9.04□□□□□ -0.96
USF1-205ENST00000473969 G0S2P27469 103 aa9.04□□□□□ -0.96
USF1-205ENST00000473969 RPL39P62891 51 aaKnown RBP9.04□□□□□ -0.96
USF1-205ENST00000473969 KRTAP26-1Q6PEX3 210 aa9.04□□□□□ -0.96
USF1-205ENST00000473969 PRSS3P2Q8NHM4 247 aa9.04□□□□□ -0.96
USF1-205ENST00000473969 MRPL18Q9H0U6 180 aaKnown RBP9.04□□□□□ -0.96
USF1-205ENST00000473969 SPANXA1Q9NS26 97 aa9.04□□□□□ -0.96
USF1-205ENST00000473969 DNAH11Q96DT5 4516 aa9.04□□□□□ -0.96
USF1-205ENST00000473969 CCL25O15444 150 aa9.03□□□□□ -0.96
USF1-205ENST00000473969 CDK2AP2O75956 126 aa9.03□□□□□ -0.96
USF1-205ENST00000473969 IFI27P40305 119 aaPredicted RBP9.03□□□□□ -0.96
USF1-205ENST00000473969 XCL1P47992 114 aa9.03□□□□□ -0.96
USF1-205ENST00000473969 SLC7A5P1Q8MH63 180 aa9.03□□□□□ -0.96
USF1-205ENST00000473969 AP5S1Q9NUS5 200 aa9.03□□□□□ -0.96
USF1-205ENST00000473969 TRAPPC1Q9Y5R8 145 aa9.03□□□□□ -0.96
USF1-205ENST00000473969 TGIF2-C20orf24A0A0A6YYL0 155 aa9.02□□□□□ -0.97
USF1-205ENST00000473969 hDV102S1A0JD36 115 aa9.02□□□□□ -0.97
USF1-205ENST00000473969 C1orf196B1AJZ1 125 aa9.02□□□□□ -0.97
USF1-205ENST00000473969 Q6ZUT4 128 aa9.02□□□□□ -0.97
USF1-205ENST00000473969 CYSLTR1Q9Y271 337 aa9.02□□□□□ -0.97
USF1-205ENST00000473969 TRAV13-1A0A0B4J241 112 aa9.01□□□□□ -0.97
USF1-205ENST00000473969 KRTAP10-1P60331 282 aa9.01□□□□□ -0.97
USF1-205ENST00000473969 RNASE13Q5GAN3 156 aaKnown RBP9.01□□□□□ -0.97
USF1-205ENST00000473969 ALKBH7Q9BT30 221 aaPredicted RBP9.01□□□□□ -0.97
USF1-205ENST00000473969 PKHD1P08F94 4074 aa9□□□□□ -0.97
USF1-205ENST00000473969 PRSS1P07477 247 aa9□□□□□ -0.97
USF1-205ENST00000473969 MRPS36P82909 103 aaKnown RBP9□□□□□ -0.97
USF1-205ENST00000473969 CD164L2Q6UWJ8 174 aa9□□□□□ -0.97
USF1-205ENST00000473969 C2orf66Q6UXQ4 117 aa9□□□□□ -0.97
USF1-205ENST00000473969 SMCO4Q9NRQ5 59 aa9□□□□□ -0.97
USF1-205ENST00000473969 PYGO1Q9Y3Y4 419 aa9□□□□□ -0.97
USF1-205ENST00000473969 MALP21145 153 aa8.99□□□□□ -0.97
USF1-205ENST00000473969 FOXI1Q12951 378 aa8.99□□□□□ -0.97
USF1-205ENST00000473969 Q6ZN92 141 aa8.99□□□□□ -0.97
USF1-205ENST00000473969 FA2HQ7L5A8 372 aa8.99□□□□□ -0.97
USF1-205ENST00000473969 DYNC1H1Q14204 4646 aaKnown RBP8.99□□□□□ -0.97
USF1-205ENST00000473969 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.98□□□□□ -0.97
USF1-205ENST00000473969 IFITM10A6NMD0 228 aa8.98□□□□□ -0.97
USF1-205ENST00000473969 TMEM141Q96I45 108 aa8.98□□□□□ -0.97
USF1-205ENST00000473969 IGHV1-58A0A0C4DH39 117 aa8.97□□□□□ -0.97
USF1-205ENST00000473969 PAPPA-AS1Q5QFB9 102 aa8.97□□□□□ -0.97
USF1-205ENST00000473969 TEX43Q6ZNM6 134 aa8.97□□□□□ -0.97
USF1-205ENST00000473969 OPRPNQ99935 248 aaPredicted RBP8.97□□□□□ -0.97
USF1-205ENST00000473969 C2orf88Q9BSF0 95 aa8.97□□□□□ -0.97
USF1-205ENST00000473969 LINC01549A6NIU2 74 aa8.96□□□□□ -0.98
USF1-205ENST00000473969 COX7A2LO14548 114 aa8.96□□□□□ -0.98
USF1-205ENST00000473969 HIGD2BQ4VC39 106 aa8.96□□□□□ -0.98
USF1-205ENST00000473969 VCX2Q9H322 139 aa8.96□□□□□ -0.98
USF1-205ENST00000473969 IGLV4-3A0A075B6K6 122 aa8.95□□□□□ -0.98
USF1-205ENST00000473969 ZNF561-AS1K7EIQ3 104 aa8.95□□□□□ -0.98
USF1-205ENST00000473969 APOMO95445 188 aa8.95□□□□□ -0.98
USF1-205ENST00000473969 NPSP0C0P6 89 aa8.95□□□□□ -0.98
USF1-205ENST00000473969 LINC01620Q4KN68 170 aa8.95□□□□□ -0.98
USF1-205ENST00000473969 CBLN2Q8IUK8 224 aa8.95□□□□□ -0.98
USF1-205ENST00000473969 C15orf56Q8N910 161 aa8.95□□□□□ -0.98
USF1-205ENST00000473969 RAB5BP61020 215 aa8.94□□□□□ -0.98
USF1-205ENST00000473969 CNBPP62633 177 aaKnown RBP8.94□□□□□ -0.98
USF1-205ENST00000473969 C9orf163Q8N9P6 203 aa8.94□□□□□ -0.98
USF1-205ENST00000473969 TOMM6Q96B49 74 aa8.94□□□□□ -0.98
USF1-205ENST00000473969 SCGB3A1Q96QR1 104 aa8.94□□□□□ -0.98
USF1-205ENST00000473969 LRP1BQ9NZR2 4599 aa8.93□□□□□ -0.98
USF1-205ENST00000473969 GVQW2A0A096LPI5 108 aaPredicted RBP8.93□□□□□ -0.98
USF1-205ENST00000473969 C5orf38Q86SI9 138 aa8.93□□□□□ -0.98
USF1-205ENST00000473969 DNAH5Q8TE73 4624 aa8.93□□□□□ -0.98
USF1-205ENST00000473969 IGHV3-64A0A075B6Q5 118 aa8.92□□□□□ -0.98
USF1-205ENST00000473969 XGP55808 180 aa8.92□□□□□ -0.98
USF1-205ENST00000473969 ERASQ7Z444 233 aa8.92□□□□□ -0.98
USF1-205ENST00000473969 FAM104AQ969W3 186 aa8.92□□□□□ -0.98
USF1-205ENST00000473969 TIMM17AQ99595 171 aa8.92□□□□□ -0.98
USF1-205ENST00000473969 ABCA13Q86UQ4 5058 aa8.91□□□□□ -0.98
USF1-205ENST00000473969 LINC01546A6NGU7 62 aa8.91□□□□□ -0.98
USF1-205ENST00000473969 IGIPA6NJ69 53 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms