RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 UPK1BO75841 260 aa9.41□□□□□ -0.9
HPS4-210ENST00000473782 TMEM101Q96IK0 257 aa9.41□□□□□ -0.9
HPS4-210ENST00000473782 BTF3L4Q96K17 158 aa9.41□□□□□ -0.9
HPS4-210ENST00000473782 G3V3Q6 166 aa9.4□□□□□ -0.9
HPS4-210ENST00000473782 ZNF861PO60384 105 aa9.4□□□□□ -0.9
HPS4-210ENST00000473782 MALP21145 153 aa9.4□□□□□ -0.9
HPS4-210ENST00000473782 RPL35P42766 123 aaKnown RBP9.4□□□□□ -0.9
HPS4-210ENST00000473782 FOXA3P55318 350 aaPredicted RBP9.4□□□□□ -0.9
HPS4-210ENST00000473782 RPS20P60866 119 aaKnown RBP9.4□□□□□ -0.9
HPS4-210ENST00000473782 C10orf25Q5T742 122 aa9.4□□□□□ -0.9
HPS4-210ENST00000473782 MRPL52Q86TS9 123 aaKnown RBP9.4□□□□□ -0.9
HPS4-210ENST00000473782 TSHBP01222 138 aa9.39□□□□□ -0.91
HPS4-210ENST00000473782 LINC01547P58512 204 aaPredicted RBP9.39□□□□□ -0.91
HPS4-210ENST00000473782 SRSF3P84103 164 aaKnown RBP9.39□□□□□ -0.91
HPS4-210ENST00000473782 C9orf62Q8N4C0 152 aa9.39□□□□□ -0.91
HPS4-210ENST00000473782 CNFNQ9BYD5 112 aa9.39□□□□□ -0.91
HPS4-210ENST00000473782 MRPL35Q9NZE8 188 aaKnown RBP9.39□□□□□ -0.91
HPS4-210ENST00000473782 TLX1NBP0CAT3 122 aa9.38□□□□□ -0.91
HPS4-210ENST00000473782 SPAG11BQ08648 103 aa9.38□□□□□ -0.91
HPS4-210ENST00000473782 C5orf38Q86SI9 138 aa9.38□□□□□ -0.91
HPS4-210ENST00000473782 BORCS7-ASMTA0A0B4J1R7 106 aa9.37□□□□□ -0.91
HPS4-210ENST00000473782 C1orf196B1AJZ1 125 aa9.37□□□□□ -0.91
HPS4-210ENST00000473782 I3L3M4 83 aa9.37□□□□□ -0.91
HPS4-210ENST00000473782 CTRLP40313 264 aa9.37□□□□□ -0.91
HPS4-210ENST00000473782 M0QXV9 152 aa9.36□□□□□ -0.91
HPS4-210ENST00000473782 TYMSOSQ8TAI1 123 aa9.36□□□□□ -0.91
HPS4-210ENST00000473782 RNASE7Q9H1E1 156 aaKnown RBP9.36□□□□□ -0.91
HPS4-210ENST00000473782 CYTL1Q9NRR1 136 aa9.36□□□□□ -0.91
HPS4-210ENST00000473782 IGLV7-46A0A075B6I9 117 aa9.35□□□□□ -0.91
HPS4-210ENST00000473782 UBE2BP63146 152 aa9.35□□□□□ -0.91
HPS4-210ENST00000473782 TWIST1Q15672 202 aa9.35□□□□□ -0.91
HPS4-210ENST00000473782 KRTAP13-2Q52LG2 175 aa9.35□□□□□ -0.91
HPS4-210ENST00000473782 MBD3L1Q8WWY6 194 aa9.35□□□□□ -0.91
HPS4-210ENST00000473782 TMEM242Q9NWH2 141 aa9.35□□□□□ -0.91
HPS4-210ENST00000473782 TRBV6-5A0A0K0K1A5 114 aa9.34□□□□□ -0.91
HPS4-210ENST00000473782 IFNA1P01562 189 aa9.34□□□□□ -0.91
HPS4-210ENST00000473782 PMCHP20382 165 aa9.34□□□□□ -0.91
HPS4-210ENST00000473782 GAGE2EQ4V326 116 aa9.34□□□□□ -0.91
HPS4-210ENST00000473782 CENPWQ5EE01 88 aa9.34□□□□□ -0.91
HPS4-210ENST00000473782 RNASE13Q5GAN3 156 aaKnown RBP9.34□□□□□ -0.91
HPS4-210ENST00000473782 IMMP2LQ96T52 175 aa9.34□□□□□ -0.91
HPS4-210ENST00000473782 SMDT1Q9H4I9 107 aa9.34□□□□□ -0.91
HPS4-210ENST00000473782 C6orf48Q9UBA6 75 aa9.34□□□□□ -0.91
HPS4-210ENST00000473782 GAGE2DQ9UEU5 116 aa9.34□□□□□ -0.91
HPS4-210ENST00000473782 A0A1B0GV50 99 aa9.33□□□□□ -0.92
HPS4-210ENST00000473782 UNQ6190/PRO20217Q6UXQ8 127 aa9.33□□□□□ -0.92
HPS4-210ENST00000473782 LINC00299Q6ZSB3 139 aa9.33□□□□□ -0.92
HPS4-210ENST00000473782 C11orf52Q96A22 123 aa9.33□□□□□ -0.92
HPS4-210ENST00000473782 MRAP2Q96G30 205 aa9.33□□□□□ -0.92
HPS4-210ENST00000473782 ANAPC11Q9NYG5 84 aa9.33□□□□□ -0.92
HPS4-210ENST00000473782 CRYGAP11844 174 aa9.32□□□□□ -0.92
HPS4-210ENST00000473782 C9orf129Q5T035 196 aaKnown RBP9.32□□□□□ -0.92
HPS4-210ENST00000473782 LCE2CQ5TA81 110 aa9.32□□□□□ -0.92
HPS4-210ENST00000473782 SFT2D1Q8WV19 159 aa9.32□□□□□ -0.92
HPS4-210ENST00000473782 S100ZQ8WXG8 99 aa9.32□□□□□ -0.92
HPS4-210ENST00000473782 ALG5Q9Y673 324 aa9.32□□□□□ -0.92
HPS4-210ENST00000473782 TRAV13-1A0A0B4J241 112 aa9.31□□□□□ -0.92
HPS4-210ENST00000473782 RAB19A4D1S5 217 aa9.31□□□□□ -0.92
HPS4-210ENST00000473782 PFDN1O60925 122 aa9.31□□□□□ -0.92
HPS4-210ENST00000473782 OR10D4PQ8NGN7 298 aa9.31□□□□□ -0.92
HPS4-210ENST00000473782 TRBV20OR9-2A0A075B6H5 130 aa9.3□□□□□ -0.92
HPS4-210ENST00000473782 XKRY2A2RUG3 117 aa9.3□□□□□ -0.92
HPS4-210ENST00000473782 POLR2KP53803 58 aaKnown RBP9.3□□□□□ -0.92
HPS4-210ENST00000473782 CSDC2Q9Y534 153 aaKnown RBP9.3□□□□□ -0.92
HPS4-210ENST00000473782 F8WDY8 70 aa9.29□□□□□ -0.92
HPS4-210ENST00000473782 TMEM241Q24JQ0 296 aa9.29□□□□□ -0.92
HPS4-210ENST00000473782 ASB16-AS1Q495Z4 193 aa9.29□□□□□ -0.92
HPS4-210ENST00000473782 LINC00173Q6ZV60 143 aa9.29□□□□□ -0.92
HPS4-210ENST00000473782 KCNRGQ8N5I3 272 aa9.29□□□□□ -0.92
HPS4-210ENST00000473782 UBE2D4Q9Y2X8 147 aa9.29□□□□□ -0.92
HPS4-210ENST00000473782 C7orf77A4D0Y5 90 aa9.28□□□□□ -0.92
HPS4-210ENST00000473782 NDUFA1O15239 70 aa9.28□□□□□ -0.92
HPS4-210ENST00000473782 TEX261Q6UWH6 196 aa9.28□□□□□ -0.92
HPS4-210ENST00000473782 NUDT10Q8NFP7 164 aa9.28□□□□□ -0.92
HPS4-210ENST00000473782 ORAOV1Q8WV07 137 aa9.28□□□□□ -0.92
HPS4-210ENST00000473782 FAM104AQ969W3 186 aa9.28□□□□□ -0.92
HPS4-210ENST00000473782 NUDT11Q96G61 164 aa9.28□□□□□ -0.92
HPS4-210ENST00000473782 CTDSP1Q9GZU7 261 aa9.28□□□□□ -0.92
HPS4-210ENST00000473782 PPDPFQ9H3Y8 114 aa9.28□□□□□ -0.92
HPS4-210ENST00000473782 FXYD6-FXYD2A0A087WZ82 144 aa9.27□□□□□ -0.93
HPS4-210ENST00000473782 IGHV3OR16-9A0A0B4J2B5 98 aa9.27□□□□□ -0.93
HPS4-210ENST00000473782 TRBV27A0A0K0K1C4 114 aa9.27□□□□□ -0.93
HPS4-210ENST00000473782 LINC00242Q5T6M2 205 aa9.27□□□□□ -0.93
HPS4-210ENST00000473782 CCL20P78556 96 aa9.26□□□□□ -0.93
HPS4-210ENST00000473782 KIAA0087Q14695 138 aa9.26□□□□□ -0.93
HPS4-210ENST00000473782 Q6ZUT4 128 aa9.26□□□□□ -0.93
HPS4-210ENST00000473782 FAM213BQ8TBF2 198 aa9.26□□□□□ -0.93
HPS4-210ENST00000473782 SMIM12Q96EX1 92 aa9.26□□□□□ -0.93
HPS4-210ENST00000473782 FAM210AQ96ND0 272 aa9.26□□□□□ -0.93
HPS4-210ENST00000473782 KRTAP9-7A8MTY7 169 aa9.25□□□□□ -0.93
HPS4-210ENST00000473782 NUPR1O60356 82 aa9.25□□□□□ -0.93
HPS4-210ENST00000473782 LINC00304Q8N9R0 145 aa9.25□□□□□ -0.93
HPS4-210ENST00000473782 ST20Q9HBF5 79 aa9.25□□□□□ -0.93
HPS4-210ENST00000473782 GIPP09681 153 aaPredicted RBP9.24□□□□□ -0.93
HPS4-210ENST00000473782 GNG4P50150 75 aa9.24□□□□□ -0.93
HPS4-210ENST00000473782 KRTAP19-2Q3LHN2 52 aa9.23□□□□□ -0.93
HPS4-210ENST00000473782 NDUFA13Q9P0J0 144 aa9.22□□□□□ -0.93
HPS4-210ENST00000473782 C22orf24Q9Y442 160 aa9.22□□□□□ -0.93
HPS4-210ENST00000473782 NDUFC2-KCTD14E9PQ53 114 aa9.21□□□□□ -0.94
HPS4-210ENST00000473782 K7EN84 100 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms