RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 LINC00467Q9BRT7 94 aa1.15□□□□□ -2.23
CALD1-216ENST00000473714 NHP2Q9NX24 153 aaKnown RBP1.15□□□□□ -2.23
CALD1-216ENST00000473714 CALML5Q9NZT1 146 aa1.15□□□□□ -2.23
CALD1-216ENST00000473714 METTL1Q9UBP6 276 aaKnown RBP1.15□□□□□ -2.23
CALD1-216ENST00000473714 PRNDQ9UKY0 176 aa1.15□□□□□ -2.23
CALD1-216ENST00000473714 BAIAP2Q9UQB8 552 aa1.15□□□□□ -2.23
CALD1-216ENST00000473714 TRAV27A0A087WT01 109 aa1.14□□□□□ -2.23
CALD1-216ENST00000473714 DUXBA0A1W2PPF3 345 aa1.14□□□□□ -2.23
CALD1-216ENST00000473714 C7orf71A4D174 169 aa1.14□□□□□ -2.23
CALD1-216ENST00000473714 MIF4GDA9UHW6 222 aaKnown RBP1.14□□□□□ -2.23
CALD1-216ENST00000473714 TAX1BP3O14907 124 aa1.14□□□□□ -2.23
CALD1-216ENST00000473714 OR2H2O95918 312 aa1.14□□□□□ -2.23
CALD1-216ENST00000473714 CRPP02741 224 aa1.14□□□□□ -2.23
CALD1-216ENST00000473714 CSN2P05814 226 aa1.14□□□□□ -2.23
CALD1-216ENST00000473714 GPX1P07203 203 aa1.14□□□□□ -2.23
CALD1-216ENST00000473714 LINC00032P0C843 101 aa1.14□□□□□ -2.23
CALD1-216ENST00000473714 EVI2AP22794 236 aa1.14□□□□□ -2.23
CALD1-216ENST00000473714 S100GP29377 79 aa1.14□□□□□ -2.23
CALD1-216ENST00000473714 ZNF80P51504 273 aaPredicted RBP1.14□□□□□ -2.23
CALD1-216ENST00000473714 CRYBA4P53673 196 aa1.14□□□□□ -2.23
CALD1-216ENST00000473714 B2MP61769 119 aa1.14□□□□□ -2.23
CALD1-216ENST00000473714 UBE2BP63146 152 aa1.14□□□□□ -2.23
CALD1-216ENST00000473714 ELOBQ15370 118 aa1.14□□□□□ -2.23
CALD1-216ENST00000473714 SS18Q15532 418 aa1.14□□□□□ -2.23
CALD1-216ENST00000473714 KISS1Q15726 138 aa1.14□□□□□ -2.23
CALD1-216ENST00000473714 RRN3P1Q2M238 152 aa1.14□□□□□ -2.23
CALD1-216ENST00000473714 LINC01554Q52M75 96 aa1.14□□□□□ -2.23
CALD1-216ENST00000473714 LCN15Q6UWW0 184 aa1.14□□□□□ -2.23
CALD1-216ENST00000473714 C7orf65Q6ZTY9 151 aa1.14□□□□□ -2.23
CALD1-216ENST00000473714 AKAP14Q86UN6 197 aa1.14□□□□□ -2.23
CALD1-216ENST00000473714 WFDC10BQ8IUB3 73 aa1.14□□□□□ -2.23
CALD1-216ENST00000473714 CTAGE3PQ8IX95 158 aa1.14□□□□□ -2.23
CALD1-216ENST00000473714 OR4D11Q8NGI4 311 aa1.14□□□□□ -2.23
CALD1-216ENST00000473714 RETNLBQ9BQ08 111 aa1.14□□□□□ -2.23
CALD1-216ENST00000473714 TIMM21Q9BVV7 248 aa1.14□□□□□ -2.23
CALD1-216ENST00000473714 YIPF3Q9GZM5 350 aa1.14□□□□□ -2.23
CALD1-216ENST00000473714 SH3BGRL3Q9H299 93 aa1.14□□□□□ -2.23
CALD1-216ENST00000473714 CACYBPQ9HB71 228 aaKnown RBP1.14□□□□□ -2.23
CALD1-216ENST00000473714 BCL2L10Q9HD36 194 aa1.14□□□□□ -2.23
CALD1-216ENST00000473714 SMPXQ9UHP9 88 aa1.14□□□□□ -2.23
CALD1-216ENST00000473714 EPDR1Q9UM22 224 aa1.14□□□□□ -2.23
CALD1-216ENST00000473714 TRAV14DV4A0A0A6YYC5 116 aa1.13□□□□□ -2.23
CALD1-216ENST00000473714 A0A0G2JQZ4 141 aa1.13□□□□□ -2.23
CALD1-216ENST00000473714 MAP1LC3B2A6NCE7 125 aa1.13□□□□□ -2.23
CALD1-216ENST00000473714 IBA57-AS1B1ANH7 110 aa1.13□□□□□ -2.23
CALD1-216ENST00000473714 TSTD3H0UI37 97 aa1.13□□□□□ -2.23
CALD1-216ENST00000473714 CD14P08571 375 aa1.13□□□□□ -2.23
CALD1-216ENST00000473714 MGST1P10620 155 aaKnown RBP1.13□□□□□ -2.23
CALD1-216ENST00000473714 LGALS3P17931 250 aaKnown RBP1.13□□□□□ -2.23
CALD1-216ENST00000473714 SRIP30626 198 aa1.13□□□□□ -2.23
CALD1-216ENST00000473714 AKR1C3P42330 323 aa1.13□□□□□ -2.23
CALD1-216ENST00000473714 ZNF345Q14585 488 aa1.13□□□□□ -2.23
CALD1-216ENST00000473714 EIF5AL1Q6IS14 154 aaKnown RBP1.13□□□□□ -2.23
CALD1-216ENST00000473714 LYPD5Q6UWN5 251 aa1.13□□□□□ -2.23
CALD1-216ENST00000473714 DHFR2Q86XF0 187 aa1.13□□□□□ -2.23
CALD1-216ENST00000473714 OR10J5Q8NHC4 309 aa1.13□□□□□ -2.23
CALD1-216ENST00000473714 RNASE11Q8TAA1 199 aaKnown RBP1.13□□□□□ -2.23
CALD1-216ENST00000473714 SLAMF6Q96DU3 332 aa1.13□□□□□ -2.23
CALD1-216ENST00000473714 MRPL57Q9BQC6 102 aaKnown RBP1.13□□□□□ -2.23
CALD1-216ENST00000473714 SLC50A1Q9BRV3 221 aa1.13□□□□□ -2.23
CALD1-216ENST00000473714 CCDC32Q9BV29 185 aa1.13□□□□□ -2.23
CALD1-216ENST00000473714 RHPN1-AS1Q9BWJ2 59 aa1.13□□□□□ -2.23
CALD1-216ENST00000473714 MAP1LC3BQ9GZQ8 125 aa1.13□□□□□ -2.23
CALD1-216ENST00000473714 TAS2R4Q9NYW5 299 aa1.13□□□□□ -2.23
CALD1-216ENST00000473714 LAMTOR3Q9UHA4 124 aa1.13□□□□□ -2.23
CALD1-216ENST00000473714 AHNAKQ09666 5890 aaKnown RBP1.13□□□□□ -2.23
CALD1-216ENST00000473714 TRAV2A0A0B4J234 112 aa1.12□□□□□ -2.23
CALD1-216ENST00000473714 TMEM212A6NML5 194 aa1.12□□□□□ -2.23
CALD1-216ENST00000473714 GPR31O00270 319 aa1.12□□□□□ -2.23
CALD1-216ENST00000473714 PITX3O75364 302 aa1.12□□□□□ -2.23
CALD1-216ENST00000473714 RPSAP08865 295 aaKnown RBP1.12□□□□□ -2.23
CALD1-216ENST00000473714 SPRR2DP22532 72 aa1.12□□□□□ -2.23
CALD1-216ENST00000473714 SAMD13Q5VXD3 122 aa1.12□□□□□ -2.23
CALD1-216ENST00000473714 ZNF833PQ6ZTB9 187 aa1.12□□□□□ -2.23
CALD1-216ENST00000473714 SLC25A26Q70HW3 274 aa1.12□□□□□ -2.23
CALD1-216ENST00000473714 C12orf45Q8N5I9 185 aaPredicted RBP1.12□□□□□ -2.23
CALD1-216ENST00000473714 MAGOHBQ96A72 148 aaKnown RBP1.12□□□□□ -2.23
CALD1-216ENST00000473714 SLC25A21Q9BQT8 299 aaPredicted RBP1.12□□□□□ -2.23
CALD1-216ENST00000473714 PRADC1Q9BSG0 188 aa1.12□□□□□ -2.23
CALD1-216ENST00000473714 OR5AC2Q9NZP5 309 aa1.12□□□□□ -2.23
CALD1-216ENST00000473714 MED31Q9Y3C7 131 aa1.12□□□□□ -2.23
CALD1-216ENST00000473714 DNAJC15Q9Y5T4 150 aa1.12□□□□□ -2.23
CALD1-216ENST00000473714 TRAV1-1A0A0B4J248 108 aa1.11□□□□□ -2.23
CALD1-216ENST00000473714 A6NIN4 97 aa1.11□□□□□ -2.23
CALD1-216ENST00000473714 F8W036 122 aa1.11□□□□□ -2.23
CALD1-216ENST00000473714 TMEM256-PLSCR3K7ERE1 68 aa1.11□□□□□ -2.23
CALD1-216ENST00000473714 TIMM17BO60830 172 aa1.11□□□□□ -2.23
CALD1-216ENST00000473714 SULT1C4O75897 302 aa1.11□□□□□ -2.23
CALD1-216ENST00000473714 FAM107AO95990 144 aa1.11□□□□□ -2.23
CALD1-216ENST00000473714 NAPSAO96009 420 aa1.11□□□□□ -2.23
CALD1-216ENST00000473714 IGKV1-16P04430 117 aa1.11□□□□□ -2.23
CALD1-216ENST00000473714 SAA2P0DJI9 122 aaPredicted RBP1.11□□□□□ -2.23
CALD1-216ENST00000473714 TMBIM6P55061 237 aa1.11□□□□□ -2.23
CALD1-216ENST00000473714 RNASE10Q5GAN6 216 aaKnown RBP1.11□□□□□ -2.23
CALD1-216ENST00000473714 SOSTDC1Q6X4U4 206 aa1.11□□□□□ -2.23
CALD1-216ENST00000473714 TTC9CQ8N5M4 171 aa1.11□□□□□ -2.23
CALD1-216ENST00000473714 OR10K1Q8NGX5 313 aa1.11□□□□□ -2.23
CALD1-216ENST00000473714 OR4K15Q8NH41 348 aa1.11□□□□□ -2.23
CALD1-216ENST00000473714 TEX47Q8TBZ9 253 aa1.11□□□□□ -2.23
CALD1-216ENST00000473714 CANT1Q8WVQ1 401 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms