RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 KIF25-AS1Q9Y6Z4 181 aa4.51□□□□□ -1.69
HDAC1-205ENST00000472928 FAT1Q14517 4588 aa4.51□□□□□ -1.69
HDAC1-205ENST00000472928 IGHV3-73A0A0B4J1V6 119 aa4.5□□□□□ -1.69
HDAC1-205ENST00000472928 IGHV4-28A0A0C4DH34 117 aa4.5□□□□□ -1.69
HDAC1-205ENST00000472928 SMIM9A6NGZ8 99 aa4.5□□□□□ -1.69
HDAC1-205ENST00000472928 RS1O15537 224 aa4.5□□□□□ -1.69
HDAC1-205ENST00000472928 HSBP1O75506 76 aa4.5□□□□□ -1.69
HDAC1-205ENST00000472928 GAGE7O76087 117 aa4.5□□□□□ -1.69
HDAC1-205ENST00000472928 GAS8-AS1O95177 125 aa4.5□□□□□ -1.69
HDAC1-205ENST00000472928 CRYGDP07320 174 aa4.5□□□□□ -1.69
HDAC1-205ENST00000472928 GAGE12FP0CL80 117 aa4.5□□□□□ -1.69
HDAC1-205ENST00000472928 GAGE12GP0CL81 117 aa4.5□□□□□ -1.69
HDAC1-205ENST00000472928 GAGE12IP0CL82 117 aa4.5□□□□□ -1.69
HDAC1-205ENST00000472928 LINC00315P59091 139 aa4.5□□□□□ -1.69
HDAC1-205ENST00000472928 CKS1BP61024 79 aa4.5□□□□□ -1.69
HDAC1-205ENST00000472928 HSD52Q0P140 79 aa4.5□□□□□ -1.69
HDAC1-205ENST00000472928 CFAP126Q5VTH2 177 aa4.5□□□□□ -1.69
HDAC1-205ENST00000472928 NRACQ8N912 160 aa4.5□□□□□ -1.69
HDAC1-205ENST00000472928 RPL39LQ96EH5 51 aaKnown RBP4.5□□□□□ -1.69
HDAC1-205ENST00000472928 MAP1LC3AQ9H492 121 aa4.5□□□□□ -1.69
HDAC1-205ENST00000472928 FLG2Q5D862 2391 aaPredicted RBP4.5□□□□□ -1.69
HDAC1-205ENST00000472928 MYCBP2O75592 4640 aa4.49□□□□□ -1.69
HDAC1-205ENST00000472928 TRGV2A0A075B6R0 118 aa4.49□□□□□ -1.69
HDAC1-205ENST00000472928 TRAV26-1A0A087WT03 109 aa4.49□□□□□ -1.69
HDAC1-205ENST00000472928 TRAV4A0A0B4J268 109 aa4.49□□□□□ -1.69
HDAC1-205ENST00000472928 LOC389332A0A1B0GUA5 103 aa4.49□□□□□ -1.69
HDAC1-205ENST00000472928 DEFB4AO15263 64 aa4.49□□□□□ -1.69
HDAC1-205ENST00000472928 IGHV3-53P01767 116 aa4.49□□□□□ -1.69
HDAC1-205ENST00000472928 MIFP14174 115 aa4.49□□□□□ -1.69
HDAC1-205ENST00000472928 CRYBA4P53673 196 aa4.49□□□□□ -1.69
HDAC1-205ENST00000472928 TCTAP57738 103 aa4.49□□□□□ -1.69
HDAC1-205ENST00000472928 LGALS9BQ3B8N2 356 aa4.49□□□□□ -1.69
HDAC1-205ENST00000472928 TMEM97Q5BJF2 176 aa4.49□□□□□ -1.69
HDAC1-205ENST00000472928 ATOH7Q8N100 152 aa4.49□□□□□ -1.69
HDAC1-205ENST00000472928 POM121L12Q8N7R1 296 aa4.49□□□□□ -1.69
HDAC1-205ENST00000472928 Q8NAQ8 132 aa4.49□□□□□ -1.69
HDAC1-205ENST00000472928 RASL10AQ92737 203 aa4.49□□□□□ -1.69
HDAC1-205ENST00000472928 CHCHD1Q96BP2 118 aaKnown RBP4.49□□□□□ -1.69
HDAC1-205ENST00000472928 UBR4Q5T4S7 5183 aa4.48□□□□□ -1.69
HDAC1-205ENST00000472928 LYRM9A8MSI8 78 aa4.48□□□□□ -1.69
HDAC1-205ENST00000472928 SYS1-DBNDD2H3BUS1 97 aa4.48□□□□□ -1.69
HDAC1-205ENST00000472928 H7C1H1 209 aa4.48□□□□□ -1.69
HDAC1-205ENST00000472928 SIVA1O15304 175 aa4.48□□□□□ -1.69
HDAC1-205ENST00000472928 TSPAN13O95857 204 aa4.48□□□□□ -1.69
HDAC1-205ENST00000472928 DEFB130BP0DP73 79 aa4.48□□□□□ -1.69
HDAC1-205ENST00000472928 DEFB130AP0DP74 79 aa4.48□□□□□ -1.69
HDAC1-205ENST00000472928 COX8AP10176 69 aa4.48□□□□□ -1.69
HDAC1-205ENST00000472928 FAM222AQ5U5X8 452 aa4.48□□□□□ -1.69
HDAC1-205ENST00000472928 FAM19A2Q8N3H0 131 aa4.48□□□□□ -1.69
HDAC1-205ENST00000472928 PRSS3P2Q8NHM4 247 aa4.48□□□□□ -1.69
HDAC1-205ENST00000472928 C11orf45Q8TAV5 145 aa4.48□□□□□ -1.69
HDAC1-205ENST00000472928 ZNF479Q96JC4 524 aa4.48□□□□□ -1.69
HDAC1-205ENST00000472928 KRTAP4-12Q9BQ66 201 aa4.48□□□□□ -1.69
HDAC1-205ENST00000472928 SMIM2Q9BVW6 85 aa4.48□□□□□ -1.69
HDAC1-205ENST00000472928 KRTAP4-8Q9BYQ9 185 aa4.48□□□□□ -1.69
HDAC1-205ENST00000472928 CELA1Q9UNI1 258 aa4.48□□□□□ -1.69
HDAC1-205ENST00000472928 A0A1W2PPM0 123 aa4.47□□□□□ -1.69
HDAC1-205ENST00000472928 H0Y8G0 127 aa4.47□□□□□ -1.69
HDAC1-205ENST00000472928 K7EQD1 137 aa4.47□□□□□ -1.69
HDAC1-205ENST00000472928 M0QY20 66 aa4.47□□□□□ -1.69
HDAC1-205ENST00000472928 PPP1R17O96001 155 aa4.47□□□□□ -1.69
HDAC1-205ENST00000472928 P0DMU3 169 aa4.47□□□□□ -1.69
HDAC1-205ENST00000472928 FAM231AP0DMU4 169 aa4.47□□□□□ -1.69
HDAC1-205ENST00000472928 FAM231CP0DMU5 169 aa4.47□□□□□ -1.69
HDAC1-205ENST00000472928 IFI27P40305 119 aaPredicted RBP4.47□□□□□ -1.69
HDAC1-205ENST00000472928 DAD1P61803 113 aa4.47□□□□□ -1.69
HDAC1-205ENST00000472928 ZFP2Q6ZN57 461 aa4.47□□□□□ -1.69
HDAC1-205ENST00000472928 ERASQ7Z444 233 aa4.47□□□□□ -1.69
HDAC1-205ENST00000472928 SPATA12Q7Z6I5 190 aa4.47□□□□□ -1.69
HDAC1-205ENST00000472928 LINC00612Q8N6U2 182 aa4.47□□□□□ -1.69
HDAC1-205ENST00000472928 URB1-AS1Q96HZ7 61 aa4.47□□□□□ -1.69
HDAC1-205ENST00000472928 GTSF1LQ9H1H1 148 aa4.47□□□□□ -1.69
HDAC1-205ENST00000472928 C11orf68Q9H3H3 251 aaKnown RBP4.47□□□□□ -1.69
HDAC1-205ENST00000472928 NXT2Q9NPJ8 142 aaKnown RBP4.47□□□□□ -1.69
HDAC1-205ENST00000472928 TRGV4A0A0C4DH28 118 aa4.46□□□□□ -1.7
HDAC1-205ENST00000472928 IGHV1-24A0A0C4DH33 117 aa4.46□□□□□ -1.7
HDAC1-205ENST00000472928 TEX48A0A1B0GUV7 120 aa4.46□□□□□ -1.7
HDAC1-205ENST00000472928 IGLL5B9A064 214 aa4.46□□□□□ -1.7
HDAC1-205ENST00000472928 CDK2AP2O75956 126 aa4.46□□□□□ -1.7
HDAC1-205ENST00000472928 FABP2P12104 132 aa4.46□□□□□ -1.7
HDAC1-205ENST00000472928 SMAGPQ0VAQ4 97 aa4.46□□□□□ -1.7
HDAC1-205ENST00000472928 C2orf91Q6ZV80 131 aa4.46□□□□□ -1.7
HDAC1-205ENST00000472928 MAPKAPK5-AS1Q8N8E1 139 aa4.46□□□□□ -1.7
HDAC1-205ENST00000472928 Q8N8P6 123 aa4.46□□□□□ -1.7
HDAC1-205ENST00000472928 C20orf78Q9BR46 151 aa4.46□□□□□ -1.7
HDAC1-205ENST00000472928 GEMIN7Q9H840 131 aaKnown RBP4.46□□□□□ -1.7
HDAC1-205ENST00000472928 SPCS1Q9Y6A9 102 aa4.46□□□□□ -1.7
HDAC1-205ENST00000472928 IGLV2-18A0A075B6J9 118 aa4.45□□□□□ -1.7
HDAC1-205ENST00000472928 TRBV6-5A0A0K0K1A5 114 aa4.45□□□□□ -1.7
HDAC1-205ENST00000472928 hDV102S1A0JD36 115 aa4.45□□□□□ -1.7
HDAC1-205ENST00000472928 SDHAF1A6NFY7 115 aa4.45□□□□□ -1.7
HDAC1-205ENST00000472928 F8W1H4 67 aa4.45□□□□□ -1.7
HDAC1-205ENST00000472928 H3BUT2 72 aa4.45□□□□□ -1.7
HDAC1-205ENST00000472928 M0R2N4 97 aa4.45□□□□□ -1.7
HDAC1-205ENST00000472928 SPART-AS1P0CW21 52 aa4.45□□□□□ -1.7
HDAC1-205ENST00000472928 LINC01545Q5VT33 79 aa4.45□□□□□ -1.7
HDAC1-205ENST00000472928 NEXN-AS1Q8NBZ9 246 aa4.45□□□□□ -1.7
HDAC1-205ENST00000472928 MAP1LC3CQ9BXW4 147 aa4.45□□□□□ -1.7
HDAC1-205ENST00000472928 HSPB8Q9UJY1 196 aa4.45□□□□□ -1.7
HDAC1-205ENST00000472928 TNFRSF18Q9Y5U5 241 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms