RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 KCNRGQ8N5I3 272 aa5.64□□□□□ -1.51
VCL-204ENST00000472585 C11orf52Q96A22 123 aa5.64□□□□□ -1.51
VCL-204ENST00000472585 CARD19Q96LW7 228 aa5.64□□□□□ -1.51
VCL-204ENST00000472585 A0A1B0GVG6 124 aa5.63□□□□□ -1.51
VCL-204ENST00000472585 F2Z2F3 143 aa5.63□□□□□ -1.51
VCL-204ENST00000472585 SYCNQ0VAF6 134 aa5.63□□□□□ -1.51
VCL-204ENST00000472585 AMMECR1LQ6DCA0 310 aa5.63□□□□□ -1.51
VCL-204ENST00000472585 PHF5AQ7RTV0 110 aaKnown RBP5.63□□□□□ -1.51
VCL-204ENST00000472585 OR5A1Q8NGJ0 315 aa5.63□□□□□ -1.51
VCL-204ENST00000472585 IGHV1-58A0A0C4DH39 117 aa5.62□□□□□ -1.51
VCL-204ENST00000472585 PFDN1O60925 122 aa5.62□□□□□ -1.51
VCL-204ENST00000472585 IFNA1P01562 189 aa5.62□□□□□ -1.51
VCL-204ENST00000472585 MT-ND6P03923 174 aa5.62□□□□□ -1.51
VCL-204ENST00000472585 TRGC1P0CF51 173 aa5.62□□□□□ -1.51
VCL-204ENST00000472585 BCL2P10415 239 aa5.62□□□□□ -1.51
VCL-204ENST00000472585 ESDP10768 282 aa5.62□□□□□ -1.51
VCL-204ENST00000472585 CTRLP40313 264 aa5.62□□□□□ -1.51
VCL-204ENST00000472585 RPS20P60866 119 aaKnown RBP5.62□□□□□ -1.51
VCL-204ENST00000472585 CNFNQ9BYD5 112 aa5.62□□□□□ -1.51
VCL-204ENST00000472585 IGLV4-69A0A075B6H9 119 aa5.61□□□□□ -1.51
VCL-204ENST00000472585 SDHAF1A6NFY7 115 aa5.61□□□□□ -1.51
VCL-204ENST00000472585 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.61□□□□□ -1.51
VCL-204ENST00000472585 H7C423 109 aa5.61□□□□□ -1.51
VCL-204ENST00000472585 KRTAP1-4P0C5Y4 121 aa5.61□□□□□ -1.51
VCL-204ENST00000472585 MEF2BQ02080 365 aaPredicted RBP5.61□□□□□ -1.51
VCL-204ENST00000472585 TWIST1Q15672 202 aa5.61□□□□□ -1.51
VCL-204ENST00000472585 C9orf116Q5BN46 136 aaPredicted RBP5.61□□□□□ -1.51
VCL-204ENST00000472585 C1orf137Q5JT78 98 aa5.61□□□□□ -1.51
VCL-204ENST00000472585 NUP35Q8NFH5 326 aa5.61□□□□□ -1.51
VCL-204ENST00000472585 DIRC1Q969H9 104 aa5.61□□□□□ -1.51
VCL-204ENST00000472585 CDC42SE2Q9NRR3 84 aa5.61□□□□□ -1.51
VCL-204ENST00000472585 UMAD1C9J7I0 102 aa5.6□□□□□ -1.51
VCL-204ENST00000472585 NCR2O95944 276 aa5.6□□□□□ -1.51
VCL-204ENST00000472585 TSHBP01222 138 aa5.6□□□□□ -1.51
VCL-204ENST00000472585 APCSP02743 223 aa5.6□□□□□ -1.51
VCL-204ENST00000472585 CD164L2Q6UWJ8 174 aa5.6□□□□□ -1.51
VCL-204ENST00000472585 KRTAP7-1Q8IUC3 87 aa5.6□□□□□ -1.51
VCL-204ENST00000472585 KRTAP4-9Q9BYQ8 210 aa5.6□□□□□ -1.51
VCL-204ENST00000472585 GNG13Q9P2W3 67 aa5.6□□□□□ -1.51
VCL-204ENST00000472585 CRCT1Q9UGL9 99 aa5.6□□□□□ -1.51
VCL-204ENST00000472585 IGLV1-50A0A075B6I6 118 aa5.59□□□□□ -1.51
VCL-204ENST00000472585 TRAV1-1A0A0B4J248 108 aa5.59□□□□□ -1.51
VCL-204ENST00000472585 LOC107984640A0A0U1RRK4 108 aa5.59□□□□□ -1.51
VCL-204ENST00000472585 FAM168BA1KXE4 195 aa5.59□□□□□ -1.51
VCL-204ENST00000472585 K7EN84 100 aa5.59□□□□□ -1.51
VCL-204ENST00000472585 IGLV7-43P04211 117 aa5.59□□□□□ -1.51
VCL-204ENST00000472585 ZNF25P17030 456 aaPredicted RBP5.59□□□□□ -1.51
VCL-204ENST00000472585 CAMPP49913 170 aa5.59□□□□□ -1.51
VCL-204ENST00000472585 GNG4P50150 75 aa5.59□□□□□ -1.51
VCL-204ENST00000472585 UBE2D1P51668 147 aa5.59□□□□□ -1.51
VCL-204ENST00000472585 OPRPNQ99935 248 aaPredicted RBP5.59□□□□□ -1.51
VCL-204ENST00000472585 RNASE7Q9H1E1 156 aaKnown RBP5.59□□□□□ -1.51
VCL-204ENST00000472585 TRBV6-5A0A0K0K1A5 114 aa5.58□□□□□ -1.52
VCL-204ENST00000472585 I3L3M4 83 aa5.58□□□□□ -1.52
VCL-204ENST00000472585 RGS21Q2M5E4 152 aa5.58□□□□□ -1.52
VCL-204ENST00000472585 TMEM242Q9NWH2 141 aa5.58□□□□□ -1.52
VCL-204ENST00000472585 H0Y9J4 135 aa5.57□□□□□ -1.52
VCL-204ENST00000472585 APOMO95445 188 aa5.57□□□□□ -1.52
VCL-204ENST00000472585 PMCHP20382 165 aa5.57□□□□□ -1.52
VCL-204ENST00000472585 POLR2KP53803 58 aaKnown RBP5.57□□□□□ -1.52
VCL-204ENST00000472585 ZNF345Q14585 488 aa5.57□□□□□ -1.52
VCL-204ENST00000472585 SS18Q15532 418 aa5.57□□□□□ -1.52
VCL-204ENST00000472585 RNASE13Q5GAN3 156 aaKnown RBP5.57□□□□□ -1.52
VCL-204ENST00000472585 MRPL52Q86TS9 123 aaKnown RBP5.57□□□□□ -1.52
VCL-204ENST00000472585 OCC1Q8TAD7 63 aa5.57□□□□□ -1.52
VCL-204ENST00000472585 SMIM12Q96EX1 92 aa5.57□□□□□ -1.52
VCL-204ENST00000472585 XKRY2A2RUG3 117 aa5.56□□□□□ -1.52
VCL-204ENST00000472585 BCL2L11O43521 198 aa5.56□□□□□ -1.52
VCL-204ENST00000472585 RPL13AP40429 203 aaKnown RBP5.56□□□□□ -1.52
VCL-204ENST00000472585 EIF5AP63241 154 aaKnown RBP5.56□□□□□ -1.52
VCL-204ENST00000472585 C5orf38Q86SI9 138 aa5.56□□□□□ -1.52
VCL-204ENST00000472585 FAM104AQ969W3 186 aa5.56□□□□□ -1.52
VCL-204ENST00000472585 TMEM101Q96IK0 257 aa5.56□□□□□ -1.52
VCL-204ENST00000472585 MANBALQ9NQG1 85 aa5.56□□□□□ -1.52
VCL-204ENST00000472585 MED9Q9NWA0 146 aa5.56□□□□□ -1.52
VCL-204ENST00000472585 FSIP2Q5CZC0 6907 aa5.56□□□□□ -1.52
VCL-204ENST00000472585 RPL18AQ02543 176 aaKnown RBP5.55□□□□□ -1.52
VCL-204ENST00000472585 C10orf25Q5T742 122 aa5.55□□□□□ -1.52
VCL-204ENST00000472585 BTF3L4Q96K17 158 aa5.55□□□□□ -1.52
VCL-204ENST00000472585 C2orf48Q96LS8 159 aa5.55□□□□□ -1.52
VCL-204ENST00000472585 CAMK2N2Q96S95 79 aa5.55□□□□□ -1.52
VCL-204ENST00000472585 RPP21Q9H633 154 aaKnown RBP5.55□□□□□ -1.52
VCL-204ENST00000472585 A0A087WZ39 114 aa5.54□□□□□ -1.52
VCL-204ENST00000472585 HMSDA8MTL9 139 aa5.54□□□□□ -1.52
VCL-204ENST00000472585 COX7A2LO14548 114 aa5.54□□□□□ -1.52
VCL-204ENST00000472585 C21orf62-AS1Q17RA5 79 aa5.54□□□□□ -1.52
VCL-204ENST00000472585 ISOC2Q96AB3 205 aa5.54□□□□□ -1.52
VCL-204ENST00000472585 MRAP2Q96G30 205 aa5.54□□□□□ -1.52
VCL-204ENST00000472585 TRBV27A0A0K0K1C4 114 aa5.53□□□□□ -1.52
VCL-204ENST00000472585 C1orf196B1AJZ1 125 aa5.53□□□□□ -1.52
VCL-204ENST00000472585 PDE6DO43924 150 aa5.53□□□□□ -1.52
VCL-204ENST00000472585 TSPAN13O95857 204 aa5.53□□□□□ -1.52
VCL-204ENST00000472585 MALP21145 153 aa5.53□□□□□ -1.52
VCL-204ENST00000472585 RNF151Q2KHN1 245 aa5.53□□□□□ -1.52
VCL-204ENST00000472585 EIF5AL1Q6IS14 154 aaKnown RBP5.53□□□□□ -1.52
VCL-204ENST00000472585 TEX261Q6UWH6 196 aa5.53□□□□□ -1.52
VCL-204ENST00000472585 ST20Q9HBF5 79 aa5.53□□□□□ -1.52
VCL-204ENST00000472585 UBE2D4Q9Y2X8 147 aa5.53□□□□□ -1.52
VCL-204ENST00000472585 hCG_2014768A0A024R1R8 64 aa5.52□□□□□ -1.53
VCL-204ENST00000472585 TRAV13-1A0A0B4J241 112 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms