RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 C20orf203Q8NBC4 194 aa9.68□□□□□ -0.86
SCAMP4-207ENST00000472442 LITAFQ99732 161 aa9.68□□□□□ -0.86
SCAMP4-207ENST00000472442 MDFICQ9P1T7 246 aa9.68□□□□□ -0.86
SCAMP4-207ENST00000472442 NPC2P61916 151 aa9.68□□□□□ -0.86
SCAMP4-207ENST00000472442 CLEC2BQ92478 149 aa9.67□□□□□ -0.86
SCAMP4-207ENST00000472442 TRAV8-3A0A0A6YYJ7 113 aa9.67□□□□□ -0.86
SCAMP4-207ENST00000472442 KHDC1LQ5JSQ8 128 aa9.67□□□□□ -0.86
SCAMP4-207ENST00000472442 FAM110AQ9BQ89 295 aa9.67□□□□□ -0.86
SCAMP4-207ENST00000472442 TIMM21Q9BVV7 248 aa9.67□□□□□ -0.86
SCAMP4-207ENST00000472442 SNRPD3P62318 126 aaKnown RBP9.66□□□□□ -0.86
SCAMP4-207ENST00000472442 ADAMTSL4-AS1Q5T5F5 129 aa9.66□□□□□ -0.86
SCAMP4-207ENST00000472442 HECTD1Q9ULT8 2610 aa9.66□□□□□ -0.86
SCAMP4-207ENST00000472442 SORL1Q92673 2214 aa9.66□□□□□ -0.86
SCAMP4-207ENST00000472442 MTORP42345 2549 aa9.65□□□□□ -0.86
SCAMP4-207ENST00000472442 TRAV12-2A0A075B6T6 113 aa9.65□□□□□ -0.86
SCAMP4-207ENST00000472442 IGHV3-16A0A0C4DH30 117 aa9.65□□□□□ -0.86
SCAMP4-207ENST00000472442 IGKV3-20P01619 116 aa9.65□□□□□ -0.86
SCAMP4-207ENST00000472442 MEIG1Q5JSS6 88 aa9.65□□□□□ -0.86
SCAMP4-207ENST00000472442 C9orf85Q96MD7 179 aa9.65□□□□□ -0.86
SCAMP4-207ENST00000472442 H3BT86 120 aa9.65□□□□□ -0.87
SCAMP4-207ENST00000472442 C11orf44Q8N8P7 122 aa9.65□□□□□ -0.87
SCAMP4-207ENST00000472442 SMR3AQ99954 134 aa9.65□□□□□ -0.87
SCAMP4-207ENST00000472442 I3L3M4 83 aa9.64□□□□□ -0.87
SCAMP4-207ENST00000472442 COX6CP09669 75 aa9.64□□□□□ -0.87
SCAMP4-207ENST00000472442 CD28P10747 220 aa9.64□□□□□ -0.87
SCAMP4-207ENST00000472442 RNASE13Q5GAN3 156 aaKnown RBP9.64□□□□□ -0.87
SCAMP4-207ENST00000472442 CHCHD5Q9BSY4 110 aa9.64□□□□□ -0.87
SCAMP4-207ENST00000472442 A8MZ25 164 aa9.63□□□□□ -0.87
SCAMP4-207ENST00000472442 NDUFA12Q9UI09 145 aa9.63□□□□□ -0.87
SCAMP4-207ENST00000472442 CEMP1Q6PRD7 247 aaPredicted RBP9.63□□□□□ -0.87
SCAMP4-207ENST00000472442 C3orf56Q8N813 242 aa9.63□□□□□ -0.87
SCAMP4-207ENST00000472442 LST1O00453 97 aa9.62□□□□□ -0.87
SCAMP4-207ENST00000472442 RNASE1P07998 156 aaKnown RBP9.62□□□□□ -0.87
SCAMP4-207ENST00000472442 MRPL23Q16540 153 aaKnown RBP9.62□□□□□ -0.87
SCAMP4-207ENST00000472442 MIAQ16674 131 aa9.62□□□□□ -0.87
SCAMP4-207ENST00000472442 TMEM61Q8N0U2 210 aa9.62□□□□□ -0.87
SCAMP4-207ENST00000472442 SPANXDQ9BXN6 97 aa9.62□□□□□ -0.87
SCAMP4-207ENST00000472442 SPANXCQ9NY87 97 aa9.62□□□□□ -0.87
SCAMP4-207ENST00000472442 PEMTQ9UBM1 199 aa9.62□□□□□ -0.87
SCAMP4-207ENST00000472442 CFAP161Q6P656 301 aa9.62□□□□□ -0.87
SCAMP4-207ENST00000472442 LINC01006Q8NI28 216 aa9.62□□□□□ -0.87
SCAMP4-207ENST00000472442 TRGV11A0A075B6L2 103 aa9.61□□□□□ -0.87
SCAMP4-207ENST00000472442 IGHV1-58A0A0C4DH39 117 aa9.61□□□□□ -0.87
SCAMP4-207ENST00000472442 SPINK13Q1W4C9 94 aa9.61□□□□□ -0.87
SCAMP4-207ENST00000472442 FAM104AQ969W3 186 aa9.61□□□□□ -0.87
SCAMP4-207ENST00000472442 FAM240AA0A1B0GVK7 77 aa9.61□□□□□ -0.87
SCAMP4-207ENST00000472442 MRPS36P82909 103 aaKnown RBP9.61□□□□□ -0.87
SCAMP4-207ENST00000472442 A0A1W2PRX2 142 aa9.6□□□□□ -0.87
SCAMP4-207ENST00000472442 OTOGQ6ZRI0 2925 aa9.6□□□□□ -0.87
SCAMP4-207ENST00000472442 KNCNA6PVL3 124 aa9.6□□□□□ -0.87
SCAMP4-207ENST00000472442 DEFB131AP59861 70 aa9.6□□□□□ -0.87
SCAMP4-207ENST00000472442 DEFB114Q30KQ6 69 aa9.6□□□□□ -0.87
SCAMP4-207ENST00000472442 DAND5Q8N907 189 aa9.6□□□□□ -0.87
SCAMP4-207ENST00000472442 CITED2Q99967 270 aaPredicted RBP9.6□□□□□ -0.87
SCAMP4-207ENST00000472442 SETD2Q9BYW2 2564 aaPredicted RBP9.59□□□□□ -0.87
SCAMP4-207ENST00000472442 IGHV3-73A0A0B4J1V6 119 aa9.59□□□□□ -0.87
SCAMP4-207ENST00000472442 C16orf95Q9H693 158 aa9.59□□□□□ -0.87
SCAMP4-207ENST00000472442 IGHV1OR15-1A0A075B7D0 117 aa9.59□□□□□ -0.87
SCAMP4-207ENST00000472442 DEFB121Q5J5C9 76 aa9.59□□□□□ -0.87
SCAMP4-207ENST00000472442 VSIG2Q96IQ7 327 aa9.59□□□□□ -0.87
SCAMP4-207ENST00000472442 TRBV7-7A0A0K0K1E9 115 aa9.58□□□□□ -0.88
SCAMP4-207ENST00000472442 HILS1P60008 231 aa9.58□□□□□ -0.88
SCAMP4-207ENST00000472442 SPANXA1Q9NS26 97 aa9.58□□□□□ -0.88
SCAMP4-207ENST00000472442 PYGO1Q9Y3Y4 419 aa9.58□□□□□ -0.88
SCAMP4-207ENST00000472442 CCL24O00175 119 aa9.57□□□□□ -0.88
SCAMP4-207ENST00000472442 RBMY1A1P0DJD3 496 aaKnown RBP9.57□□□□□ -0.88
SCAMP4-207ENST00000472442 RBMY1CP0DJD4 496 aa9.57□□□□□ -0.88
SCAMP4-207ENST00000472442 RBMY1FQ15415 496 aaKnown RBP9.57□□□□□ -0.88
SCAMP4-207ENST00000472442 NIPBLQ6KC79 2804 aaeCLIP9.57□□□□□ -0.88
SCAMP4-207ENST00000472442 FAM236AA0A1B0GUQ0 79 aa9.57□□□□□ -0.88
SCAMP4-207ENST00000472442 FAM236BA0A1B0GV22 79 aa9.57□□□□□ -0.88
SCAMP4-207ENST00000472442 RBMY1BA6NDE4 496 aaKnown RBP9.57□□□□□ -0.88
SCAMP4-207ENST00000472442 RBMY1EA6NEQ0 496 aaKnown RBP9.57□□□□□ -0.88
SCAMP4-207ENST00000472442 RBMY1DP0C7P1 496 aaKnown RBP9.57□□□□□ -0.88
SCAMP4-207ENST00000472442 PROK1P58294 105 aa9.57□□□□□ -0.88
SCAMP4-207ENST00000472442 DYNLRB2Q8TF09 96 aa9.57□□□□□ -0.88
SCAMP4-207ENST00000472442 TMEM101Q96IK0 257 aa9.57□□□□□ -0.88
SCAMP4-207ENST00000472442 A8MTW9 85 aa9.57□□□□□ -0.88
SCAMP4-207ENST00000472442 LINC01587Q99440 93 aa9.57□□□□□ -0.88
SCAMP4-207ENST00000472442 NOTCH2Q04721 2471 aa9.56□□□□□ -0.88
SCAMP4-207ENST00000472442 MAP6D1Q9H9H5 199 aa9.56□□□□□ -0.88
SCAMP4-207ENST00000472442 LY6G6DO95868 133 aa9.56□□□□□ -0.88
SCAMP4-207ENST00000472442 HIVEP2P31629 2446 aa9.55□□□□□ -0.88
SCAMP4-207ENST00000472442 WNK1Q9H4A3 2382 aa9.55□□□□□ -0.88
SCAMP4-207ENST00000472442 TINCRA0A1B0GVN0 87 aa9.54□□□□□ -0.88
SCAMP4-207ENST00000472442 HTN1P15515 57 aa9.54□□□□□ -0.88
SCAMP4-207ENST00000472442 Q9UF83 564 aa9.54□□□□□ -0.88
SCAMP4-207ENST00000472442 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.54□□□□□ -0.88
SCAMP4-207ENST00000472442 IGKV2-29A2NJV5 120 aaPredicted RBP9.54□□□□□ -0.88
SCAMP4-207ENST00000472442 SETXQ7Z333 2677 aaKnown RBP9.53□□□□□ -0.88
SCAMP4-207ENST00000472442 SMCR5Q8TEV8 140 aa9.53□□□□□ -0.88
SCAMP4-207ENST00000472442 PRM2P04554 102 aa9.52□□□□□ -0.88
SCAMP4-207ENST00000472442 ODF3L2Q3SX64 289 aa9.52□□□□□ -0.88
SCAMP4-207ENST00000472442 TMEM126AQ9H061 195 aa9.52□□□□□ -0.88
SCAMP4-207ENST00000472442 UBE2D4Q9Y2X8 147 aa9.52□□□□□ -0.88
SCAMP4-207ENST00000472442 TNFRSF18Q9Y5U5 241 aa9.52□□□□□ -0.88
SCAMP4-207ENST00000472442 CDKN2A-AS1Q9UH64 79 aa9.52□□□□□ -0.89
SCAMP4-207ENST00000472442 A0A0U1RRA0 63 aa9.51□□□□□ -0.89
SCAMP4-207ENST00000472442 CHCHD7Q9BUK0 85 aa9.51□□□□□ -0.89
SCAMP4-207ENST00000472442 TIMM17BO60830 172 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms