RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 BCL2L11O43521 198 aa5.9□□□□□ -1.46
CDHR3-209ENST00000472116 SNAI2O43623 268 aa5.9□□□□□ -1.46
CDHR3-209ENST00000472116 CXorf1O96002 111 aa5.9□□□□□ -1.46
CDHR3-209ENST00000472116 CXCL1P09341 107 aa5.9□□□□□ -1.46
CDHR3-209ENST00000472116 GIPP09681 153 aaPredicted RBP5.9□□□□□ -1.46
CDHR3-209ENST00000472116 OR5AL1P0C617 328 aa5.9□□□□□ -1.46
CDHR3-209ENST00000472116 ZNF25P17030 456 aaPredicted RBP5.9□□□□□ -1.46
CDHR3-209ENST00000472116 MT1HP80294 61 aa5.9□□□□□ -1.46
CDHR3-209ENST00000472116 COX8CQ7Z4L0 72 aa5.9□□□□□ -1.46
CDHR3-209ENST00000472116 HIST1H2BAQ96A08 127 aa5.9□□□□□ -1.46
CDHR3-209ENST00000472116 FMC1Q96HJ9 113 aa5.9□□□□□ -1.46
CDHR3-209ENST00000472116 KRTAP4-1Q9BYQ7 146 aa5.9□□□□□ -1.46
CDHR3-209ENST00000472116 SMIM3Q9BZL3 60 aa5.9□□□□□ -1.46
CDHR3-209ENST00000472116 NIT2Q9NQR4 276 aa5.9□□□□□ -1.46
CDHR3-209ENST00000472116 COX7A2LO14548 114 aa5.89□□□□□ -1.47
CDHR3-209ENST00000472116 APCSP02743 223 aa5.89□□□□□ -1.47
CDHR3-209ENST00000472116 PET100P0DJ07 73 aa5.89□□□□□ -1.47
CDHR3-209ENST00000472116 ESDP10768 282 aa5.89□□□□□ -1.47
CDHR3-209ENST00000472116 CTAG1AP78358 180 aa5.89□□□□□ -1.47
CDHR3-209ENST00000472116 RNF151Q2KHN1 245 aa5.89□□□□□ -1.47
CDHR3-209ENST00000472116 TCTE3Q8IZS6 198 aa5.89□□□□□ -1.47
CDHR3-209ENST00000472116 RAB24Q969Q5 203 aa5.89□□□□□ -1.47
CDHR3-209ENST00000472116 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.88□□□□□ -1.47
CDHR3-209ENST00000472116 IGKV2-29A2NJV5 120 aaPredicted RBP5.88□□□□□ -1.47
CDHR3-209ENST00000472116 NUPR1O60356 82 aa5.88□□□□□ -1.47
CDHR3-209ENST00000472116 KRTAP10-6P60371 365 aaPredicted RBP5.88□□□□□ -1.47
CDHR3-209ENST00000472116 FP248Q71RG6 208 aaPredicted RBP5.88□□□□□ -1.47
CDHR3-209ENST00000472116 NKX6-2Q9C056 277 aaPredicted RBP5.88□□□□□ -1.47
CDHR3-209ENST00000472116 HSPB11Q9Y547 144 aa5.88□□□□□ -1.47
CDHR3-209ENST00000472116 M0R2T5 61 aa5.87□□□□□ -1.47
CDHR3-209ENST00000472116 NCR2O95944 276 aa5.87□□□□□ -1.47
CDHR3-209ENST00000472116 RPL28P46779 137 aaKnown RBP5.87□□□□□ -1.47
CDHR3-209ENST00000472116 H2BFSP57053 126 aa5.87□□□□□ -1.47
CDHR3-209ENST00000472116 OR2D3Q8NGH3 330 aa5.87□□□□□ -1.47
CDHR3-209ENST00000472116 UBE2G2P60604 165 aa5.86□□□□□ -1.47
CDHR3-209ENST00000472116 GAGE2EQ4V326 116 aa5.86□□□□□ -1.47
CDHR3-209ENST00000472116 GAGE2DQ9UEU5 116 aa5.86□□□□□ -1.47
CDHR3-209ENST00000472116 IGKV2D-26A0A0A0MRZ7 120 aa5.85□□□□□ -1.47
CDHR3-209ENST00000472116 MBP02144 154 aa5.85□□□□□ -1.47
CDHR3-209ENST00000472116 NTF3P20783 257 aa5.85□□□□□ -1.47
CDHR3-209ENST00000472116 SPAG11BQ08648 103 aa5.85□□□□□ -1.47
CDHR3-209ENST00000472116 KRTAP5-3Q6L8H2 238 aa5.85□□□□□ -1.47
CDHR3-209ENST00000472116 PPP1R1CQ8WVI7 109 aa5.85□□□□□ -1.47
CDHR3-209ENST00000472116 TPPP3Q9BW30 176 aa5.85□□□□□ -1.47
CDHR3-209ENST00000472116 ACTR3CQ9C0K3 210 aaPredicted RBP5.85□□□□□ -1.47
CDHR3-209ENST00000472116 MRPL35Q9NZE8 188 aaKnown RBP5.85□□□□□ -1.47
CDHR3-209ENST00000472116 SIX6O95475 246 aa5.84□□□□□ -1.47
CDHR3-209ENST00000472116 LTAP01374 205 aa5.84□□□□□ -1.47
CDHR3-209ENST00000472116 TRGC1P0CF51 173 aa5.84□□□□□ -1.47
CDHR3-209ENST00000472116 KRTAP13-3Q3SY46 172 aa5.84□□□□□ -1.47
CDHR3-209ENST00000472116 CTDSP1Q9GZU7 261 aa5.84□□□□□ -1.47
CDHR3-209ENST00000472116 HMSDA8MTL9 139 aa5.83□□□□□ -1.48
CDHR3-209ENST00000472116 C1orf196B1AJZ1 125 aa5.83□□□□□ -1.48
CDHR3-209ENST00000472116 F8WDY8 70 aa5.83□□□□□ -1.48
CDHR3-209ENST00000472116 G3V3Q6 166 aa5.83□□□□□ -1.48
CDHR3-209ENST00000472116 NDUFA1O15239 70 aa5.83□□□□□ -1.48
CDHR3-209ENST00000472116 MPC2O95563 127 aa5.83□□□□□ -1.48
CDHR3-209ENST00000472116 TLX1NBP0CAT3 122 aa5.83□□□□□ -1.48
CDHR3-209ENST00000472116 AKR1C3P42330 323 aa5.83□□□□□ -1.48
CDHR3-209ENST00000472116 H0YIZ8 118 aa5.82□□□□□ -1.48
CDHR3-209ENST00000472116 TMEM241Q24JQ0 296 aa5.82□□□□□ -1.48
CDHR3-209ENST00000472116 FAM229BQ4G0N7 80 aa5.82□□□□□ -1.48
CDHR3-209ENST00000472116 KRTAP13-2Q52LG2 175 aa5.82□□□□□ -1.48
CDHR3-209ENST00000472116 OR10D4PQ8NGN7 298 aa5.82□□□□□ -1.48
CDHR3-209ENST00000472116 STOML3Q8TAV4 291 aa5.82□□□□□ -1.48
CDHR3-209ENST00000472116 ANAPC11Q9NYG5 84 aa5.82□□□□□ -1.48
CDHR3-209ENST00000472116 FXYD6-FXYD2A0A087WZ82 144 aa5.81□□□□□ -1.48
CDHR3-209ENST00000472116 ZNF345Q14585 488 aa5.81□□□□□ -1.48
CDHR3-209ENST00000472116 SMDT1Q9H4I9 107 aa5.81□□□□□ -1.48
CDHR3-209ENST00000472116 UBE2D4Q9Y2X8 147 aa5.81□□□□□ -1.48
CDHR3-209ENST00000472116 FAM74A7A6NL05 159 aa5.8□□□□□ -1.48
CDHR3-209ENST00000472116 LBHQ53QV2 105 aaPredicted RBP5.8□□□□□ -1.48
CDHR3-209ENST00000472116 C5orf38Q86SI9 138 aa5.8□□□□□ -1.48
CDHR3-209ENST00000472116 MRAP2Q96G30 205 aa5.8□□□□□ -1.48
CDHR3-209ENST00000472116 TCEAL7Q9BRU2 100 aa5.8□□□□□ -1.48
CDHR3-209ENST00000472116 WFDC1Q9HC57 220 aa5.8□□□□□ -1.48
CDHR3-209ENST00000472116 TNFSF18Q9UNG2 199 aa5.8□□□□□ -1.48
CDHR3-209ENST00000472116 PMCHP20382 165 aa5.79□□□□□ -1.48
CDHR3-209ENST00000472116 SERF2P84101 59 aa5.79□□□□□ -1.48
CDHR3-209ENST00000472116 SPAG11AQ6PDA7 123 aa5.79□□□□□ -1.48
CDHR3-209ENST00000472116 KRTAP7-1Q8IUC3 87 aa5.79□□□□□ -1.48
CDHR3-209ENST00000472116 ORAOV1Q8WV07 137 aa5.79□□□□□ -1.48
CDHR3-209ENST00000472116 PSMG3Q9BT73 122 aaPredicted RBP5.79□□□□□ -1.48
CDHR3-209ENST00000472116 CDC42SE2Q9NRR3 84 aa5.79□□□□□ -1.48
CDHR3-209ENST00000472116 SMLR1H3BR10 107 aa5.78□□□□□ -1.48
CDHR3-209ENST00000472116 ARPC5O15511 151 aa5.78□□□□□ -1.48
CDHR3-209ENST00000472116 BCE1O60756 84 aa5.78□□□□□ -1.48
CDHR3-209ENST00000472116 S100A9P06702 114 aaKnown RBP5.78□□□□□ -1.48
CDHR3-209ENST00000472116 ATP6V0CP27449 155 aa5.78□□□□□ -1.48
CDHR3-209ENST00000472116 Q5BKY6 102 aa5.78□□□□□ -1.48
CDHR3-209ENST00000472116 CST9LP1Q5W188 147 aa5.78□□□□□ -1.48
CDHR3-209ENST00000472116 KCNRGQ8N5I3 272 aa5.78□□□□□ -1.48
CDHR3-209ENST00000472116 KANTRA0A1W2PQU2 76 aa5.77□□□□□ -1.49
CDHR3-209ENST00000472116 I3L3M4 83 aa5.77□□□□□ -1.49
CDHR3-209ENST00000472116 CTRLP40313 264 aa5.77□□□□□ -1.49
CDHR3-209ENST00000472116 RPS20P60866 119 aaKnown RBP5.77□□□□□ -1.49
CDHR3-209ENST00000472116 SMAGPQ0VAQ4 97 aa5.77□□□□□ -1.49
CDHR3-209ENST00000472116 BAGE2Q86Y30 109 aa5.77□□□□□ -1.49
CDHR3-209ENST00000472116 C9orf62Q8N4C0 152 aa5.77□□□□□ -1.49
CDHR3-209ENST00000472116 DAND5Q8N907 189 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 247.1 ms