RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 COX11Q9Y6N1 276 aa9.44□□□□□ -0.9
SSR4-207ENST00000471724 CLPSL2Q6UWE3 100 aa9.43□□□□□ -0.9
SSR4-207ENST00000471724 C1orf43Q9BWL3 253 aa9.43□□□□□ -0.9
SSR4-207ENST00000471724 PYGO1Q9Y3Y4 419 aa9.43□□□□□ -0.9
SSR4-207ENST00000471724 PSCAO43653 123 aa9.42□□□□□ -0.9
SSR4-207ENST00000471724 NPSP0C0P6 89 aa9.42□□□□□ -0.9
SSR4-207ENST00000471724 LINC00614P0C842 121 aa9.42□□□□□ -0.9
SSR4-207ENST00000471724 ENHOQ6UWT2 76 aa9.42□□□□□ -0.9
SSR4-207ENST00000471724 ZNF664Q8N3J9 261 aa9.42□□□□□ -0.9
SSR4-207ENST00000471724 CDC42SE2Q9NRR3 84 aa9.42□□□□□ -0.9
SSR4-207ENST00000471724 IGKV2D-24A0A075B6R9 120 aa9.41□□□□□ -0.9
SSR4-207ENST00000471724 TRAV8-4A0A0B4J246 113 aa9.41□□□□□ -0.9
SSR4-207ENST00000471724 RTL8CO15255 209 aa9.41□□□□□ -0.9
SSR4-207ENST00000471724 MRPS36P82909 103 aaKnown RBP9.41□□□□□ -0.9
SSR4-207ENST00000471724 Q6ZRN7 208 aaPredicted RBP9.41□□□□□ -0.9
SSR4-207ENST00000471724 Q6ZUT4 128 aa9.41□□□□□ -0.9
SSR4-207ENST00000471724 BAGE3Q86Y29 109 aa9.41□□□□□ -0.9
SSR4-207ENST00000471724 CHCHD1Q96BP2 118 aaKnown RBP9.41□□□□□ -0.9
SSR4-207ENST00000471724 PAPPA-AS1Q5QFB9 102 aa9.4□□□□□ -0.9
SSR4-207ENST00000471724 Q6ZN92 141 aa9.4□□□□□ -0.9
SSR4-207ENST00000471724 TOMM6Q96B49 74 aa9.4□□□□□ -0.9
SSR4-207ENST00000471724 HBDP02042 147 aa9.39□□□□□ -0.91
SSR4-207ENST00000471724 URB1-AS1Q96HZ7 61 aa9.39□□□□□ -0.91
SSR4-207ENST00000471724 TMEM141Q96I45 108 aa9.39□□□□□ -0.91
SSR4-207ENST00000471724 TIMM17AQ99595 171 aa9.39□□□□□ -0.91
SSR4-207ENST00000471724 EPPK1P58107 5090 aaKnown RBP9.38□□□□□ -0.91
SSR4-207ENST00000471724 IGLV4-3A0A075B6K6 122 aa9.38□□□□□ -0.91
SSR4-207ENST00000471724 IGKV3OR2-268A0A0C4DH90 116 aa9.38□□□□□ -0.91
SSR4-207ENST00000471724 CCL25O15444 150 aa9.38□□□□□ -0.91
SSR4-207ENST00000471724 ERASQ7Z444 233 aa9.38□□□□□ -0.91
SSR4-207ENST00000471724 PRSS29PA6NIE9 313 aa9.37□□□□□ -0.91
SSR4-207ENST00000471724 HSBP1O75506 76 aa9.37□□□□□ -0.91
SSR4-207ENST00000471724 SS18Q15532 418 aa9.37□□□□□ -0.91
SSR4-207ENST00000471724 SCGB3A1Q96QR1 104 aa9.37□□□□□ -0.91
SSR4-207ENST00000471724 C2orf88Q9BSF0 95 aa9.37□□□□□ -0.91
SSR4-207ENST00000471724 IGLV10-54A0A075B6I4 117 aa9.36□□□□□ -0.91
SSR4-207ENST00000471724 IGIPA6NJ69 53 aa9.36□□□□□ -0.91
SSR4-207ENST00000471724 IFITM10A6NMD0 228 aa9.36□□□□□ -0.91
SSR4-207ENST00000471724 C1orf196B1AJZ1 125 aa9.36□□□□□ -0.91
SSR4-207ENST00000471724 HIST1H2BKO60814 126 aa9.36□□□□□ -0.91
SSR4-207ENST00000471724 HIST1H2BJP06899 126 aa9.36□□□□□ -0.91
SSR4-207ENST00000471724 HIST1H2BOP23527 126 aa9.36□□□□□ -0.91
SSR4-207ENST00000471724 HIST1H2BBP33778 126 aa9.36□□□□□ -0.91
SSR4-207ENST00000471724 HIST1H2BDP58876 126 aa9.36□□□□□ -0.91
SSR4-207ENST00000471724 HIST1H2BCP62807 126 aa9.36□□□□□ -0.91
SSR4-207ENST00000471724 HIST2H2BEQ16778 126 aa9.36□□□□□ -0.91
SSR4-207ENST00000471724 RNASE13Q5GAN3 156 aaKnown RBP9.36□□□□□ -0.91
SSR4-207ENST00000471724 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.36□□□□□ -0.91
SSR4-207ENST00000471724 TEX43Q6ZNM6 134 aa9.36□□□□□ -0.91
SSR4-207ENST00000471724 HIST1H2BHQ93079 126 aa9.36□□□□□ -0.91
SSR4-207ENST00000471724 HIST1H2BNQ99877 126 aa9.36□□□□□ -0.91
SSR4-207ENST00000471724 HIST1H2BMQ99879 126 aa9.36□□□□□ -0.91
SSR4-207ENST00000471724 A0A096LNJ9 63 aa9.35□□□□□ -0.91
SSR4-207ENST00000471724 LINC00959A0A1B0GUT2 108 aa9.35□□□□□ -0.91
SSR4-207ENST00000471724 EREGO14944 169 aa9.35□□□□□ -0.91
SSR4-207ENST00000471724 SERF1AO75920 110 aa9.35□□□□□ -0.91
SSR4-207ENST00000471724 DNAH10Q8IVF4 4471 aa9.35□□□□□ -0.91
SSR4-207ENST00000471724 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.34□□□□□ -0.91
SSR4-207ENST00000471724 TNP2Q05952 138 aa9.34□□□□□ -0.91
SSR4-207ENST00000471724 CHCHD10Q8WYQ3 142 aaPredicted RBP9.34□□□□□ -0.91
SSR4-207ENST00000471724 OPRPNQ99935 248 aaPredicted RBP9.34□□□□□ -0.91
SSR4-207ENST00000471724 VCX2Q9H322 139 aa9.34□□□□□ -0.91
SSR4-207ENST00000471724 BIRC6Q9NR09 4857 aa9.34□□□□□ -0.91
SSR4-207ENST00000471724 FRAS1Q86XX4 4008 aa9.33□□□□□ -0.92
SSR4-207ENST00000471724 TRAV13-1A0A0B4J241 112 aa9.33□□□□□ -0.92
SSR4-207ENST00000471724 ATP5LO75964 103 aa9.33□□□□□ -0.92
SSR4-207ENST00000471724 PMCHL1Q16048 86 aa9.33□□□□□ -0.92
SSR4-207ENST00000471724 FAM104AQ969W3 186 aa9.33□□□□□ -0.92
SSR4-207ENST00000471724 XCL1P47992 114 aa9.32□□□□□ -0.92
SSR4-207ENST00000471724 PDZD11Q5EBL8 140 aa9.32□□□□□ -0.92
SSR4-207ENST00000471724 KRTAP26-1Q6PEX3 210 aa9.32□□□□□ -0.92
SSR4-207ENST00000471724 AMELXQ99217 191 aa9.32□□□□□ -0.92
SSR4-207ENST00000471724 A0A087WTM6 91 aa9.31□□□□□ -0.92
SSR4-207ENST00000471724 GAGE12HA6NDE8 117 aa9.31□□□□□ -0.92
SSR4-207ENST00000471724 LINC00310P59036 64 aa9.31□□□□□ -0.92
SSR4-207ENST00000471724 C14orf177Q52M58 125 aa9.31□□□□□ -0.92
SSR4-207ENST00000471724 CD164L2Q6UWJ8 174 aa9.31□□□□□ -0.92
SSR4-207ENST00000471724 LINC00173Q6ZV60 143 aa9.31□□□□□ -0.92
SSR4-207ENST00000471724 LRCOL1A6NCL2 159 aa9.3□□□□□ -0.92
SSR4-207ENST00000471724 SEC11AP67812 179 aa9.3□□□□□ -0.92
SSR4-207ENST00000471724 MAPKAPK5-AS1Q8N8E1 139 aa9.3□□□□□ -0.92
SSR4-207ENST00000471724 BAALCQ8WXS3 180 aa9.3□□□□□ -0.92
SSR4-207ENST00000471724 A0A1B0GVY2 172 aa9.29□□□□□ -0.92
SSR4-207ENST00000471724 UBE2D1P51668 147 aa9.29□□□□□ -0.92
SSR4-207ENST00000471724 FOXI1Q12951 378 aa9.29□□□□□ -0.92
SSR4-207ENST00000471724 PMVKQ15126 192 aa9.29□□□□□ -0.92
SSR4-207ENST00000471724 COA6Q5JTJ3 125 aaKnown RBP9.29□□□□□ -0.92
SSR4-207ENST00000471724 FAM19A2Q8N3H0 131 aa9.29□□□□□ -0.92
SSR4-207ENST00000471724 USP17L23D6RBM5 183 aa9.28□□□□□ -0.92
SSR4-207ENST00000471724 CFAP161Q6P656 301 aa9.28□□□□□ -0.92
SSR4-207ENST00000471724 COX7A2LO14548 114 aa9.27□□□□□ -0.93
SSR4-207ENST00000471724 LECT2O14960 151 aa9.27□□□□□ -0.93
SSR4-207ENST00000471724 LEPROTL1O95214 131 aa9.27□□□□□ -0.93
SSR4-207ENST00000471724 HERVK_113P63121 156 aa9.27□□□□□ -0.93
SSR4-207ENST00000471724 FAM19A3Q7Z5A8 133 aa9.27□□□□□ -0.93
SSR4-207ENST00000471724 Q8N814 137 aa9.27□□□□□ -0.93
SSR4-207ENST00000471724 IFI27L1Q96BM0 104 aa9.27□□□□□ -0.93
SSR4-207ENST00000471724 HSPB8Q9UJY1 196 aa9.27□□□□□ -0.93
SSR4-207ENST00000471724 MALP21145 153 aa9.26□□□□□ -0.93
SSR4-207ENST00000471724 WFDC2Q14508 124 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms