RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 ZNF22P17026 224 aaPredicted RBP2.11□□□□□ -2.07
SCN3A-207ENST00000471697 PLNP26678 52 aa2.11□□□□□ -2.07
SCN3A-207ENST00000471697 DEFB116Q30KQ4 102 aa2.11□□□□□ -2.07
SCN3A-207ENST00000471697 FAM229BQ4G0N7 80 aa2.11□□□□□ -2.07
SCN3A-207ENST00000471697 TIAM2Q8IVF5 1701 aa2.11□□□□□ -2.07
SCN3A-207ENST00000471697 PI4KAP42356 2102 aa2.11□□□□□ -2.07
SCN3A-207ENST00000471697 ARHGAP32A7KAX9 2087 aa2.1□□□□□ -2.07
SCN3A-207ENST00000471697 TRBV6-8A0A0A6YYG3 113 aa2.1□□□□□ -2.07
SCN3A-207ENST00000471697 IGLV7-43P04211 117 aa2.1□□□□□ -2.07
SCN3A-207ENST00000471697 FCER1GP30273 86 aa2.1□□□□□ -2.07
SCN3A-207ENST00000471697 EDDM3BP56851 147 aa2.1□□□□□ -2.07
SCN3A-207ENST00000471697 FXYD6P3P58550 94 aa2.1□□□□□ -2.07
SCN3A-207ENST00000471697 KRTAP13-3Q3SY46 172 aa2.1□□□□□ -2.07
SCN3A-207ENST00000471697 FAM215AQ9Y5M1 114 aa2.1□□□□□ -2.07
SCN3A-207ENST00000471697 RICTORQ6R327 1708 aa2.1□□□□□ -2.07
SCN3A-207ENST00000471697 LTBP2Q14767 1821 aa2.1□□□□□ -2.07
SCN3A-207ENST00000471697 ZGRF1Q86YA3 2104 aa2.09□□□□□ -2.07
SCN3A-207ENST00000471697 COL4A6Q14031 1691 aa2.09□□□□□ -2.07
SCN3A-207ENST00000471697 DOT1LQ8TEK3 1739 aa2.09□□□□□ -2.07
SCN3A-207ENST00000471697 IGLV3-12A0A075B6K2 115 aa2.09□□□□□ -2.07
SCN3A-207ENST00000471697 TRAV23DV6A0A075B6W5 121 aa2.09□□□□□ -2.07
SCN3A-207ENST00000471697 TRBV6-6A0A0A6YYG2 114 aa2.09□□□□□ -2.07
SCN3A-207ENST00000471697 TRAV22A0A0B4J277 110 aa2.09□□□□□ -2.07
SCN3A-207ENST00000471697 SDHAF1A6NFY7 115 aa2.09□□□□□ -2.07
SCN3A-207ENST00000471697 LINC01546A6NGU7 62 aa2.09□□□□□ -2.07
SCN3A-207ENST00000471697 WISP3O95389 354 aaPredicted RBP2.09□□□□□ -2.07
SCN3A-207ENST00000471697 IGLV1-51P01701 117 aa2.09□□□□□ -2.07
SCN3A-207ENST00000471697 IGHV3-53P01767 116 aa2.09□□□□□ -2.07
SCN3A-207ENST00000471697 IGHV3-33P01772 117 aa2.09□□□□□ -2.07
SCN3A-207ENST00000471697 MRGPRG-AS1Q2M3A8 158 aa2.09□□□□□ -2.07
SCN3A-207ENST00000471697 FAM27BQ5VT28 67 aa2.09□□□□□ -2.07
SCN3A-207ENST00000471697 Q6ZR54 194 aa2.09□□□□□ -2.07
SCN3A-207ENST00000471697 KRTAP5-5Q701N2 237 aaPredicted RBP2.09□□□□□ -2.07
SCN3A-207ENST00000471697 TMEM14BQ9NUH8 114 aa2.09□□□□□ -2.07
SCN3A-207ENST00000471697 LRRC37A3O60309 1634 aa2.09□□□□□ -2.08
SCN3A-207ENST00000471697 SDK2Q58EX2 2172 aa2.09□□□□□ -2.08
SCN3A-207ENST00000471697 MED13Q9UHV7 2174 aa2.09□□□□□ -2.08
SCN3A-207ENST00000471697 TET1Q8NFU7 2136 aa2.08□□□□□ -2.08
SCN3A-207ENST00000471697 PRRC2AP48634 2157 aaKnown RBP2.08□□□□□ -2.08
SCN3A-207ENST00000471697 IGLV3-16A0A075B6K0 115 aa2.08□□□□□ -2.08
SCN3A-207ENST00000471697 TRAV12-1A0A0B4J245 112 aa2.08□□□□□ -2.08
SCN3A-207ENST00000471697 LOC101927531A0A1B0GV80 90 aa2.08□□□□□ -2.08
SCN3A-207ENST00000471697 C11orf86A6NJI1 115 aa2.08□□□□□ -2.08
SCN3A-207ENST00000471697 D6R8Y8 96 aa2.08□□□□□ -2.08
SCN3A-207ENST00000471697 H3BPC8 53 aa2.08□□□□□ -2.08
SCN3A-207ENST00000471697 CHKB-CPT1BH3BT56 60 aa2.08□□□□□ -2.08
SCN3A-207ENST00000471697 SAA2P0DJI9 122 aaPredicted RBP2.08□□□□□ -2.08
SCN3A-207ENST00000471697 ELOF1P60002 83 aaKnown RBP2.08□□□□□ -2.08
SCN3A-207ENST00000471697 CASC2Q6XLA1 102 aa2.08□□□□□ -2.08
SCN3A-207ENST00000471697 MUSTN1Q8IVN3 82 aa2.08□□□□□ -2.08
SCN3A-207ENST00000471697 Q8IYB0 196 aa2.08□□□□□ -2.08
SCN3A-207ENST00000471697 Q8N814 137 aa2.08□□□□□ -2.08
SCN3A-207ENST00000471697 Q8NAQ8 132 aa2.08□□□□□ -2.08
SCN3A-207ENST00000471697 ST20-AS1Q8NBB2 130 aa2.08□□□□□ -2.08
SCN3A-207ENST00000471697 SPTSSBQ8NFR3 76 aa2.08□□□□□ -2.08
SCN3A-207ENST00000471697 BPESC1Q9GZL8 116 aa2.08□□□□□ -2.08
SCN3A-207ENST00000471697 C14orf132Q9NPU4 83 aa2.08□□□□□ -2.08
SCN3A-207ENST00000471697 TMEM167BQ9NRX6 74 aa2.08□□□□□ -2.08
SCN3A-207ENST00000471697 PSENENQ9NZ42 101 aa2.08□□□□□ -2.08
SCN3A-207ENST00000471697 INTS1Q8N201 2190 aaKnown RBP2.08□□□□□ -2.08
SCN3A-207ENST00000471697 A0A1B0GU33 70 aa2.07□□□□□ -2.08
SCN3A-207ENST00000471697 PIN1P1O15428 100 aa2.07□□□□□ -2.08
SCN3A-207ENST00000471697 ROMO1P60602 79 aa2.07□□□□□ -2.08
SCN3A-207ENST00000471697 C10orf128Q5T292 105 aa2.07□□□□□ -2.08
SCN3A-207ENST00000471697 FAM74A4Q5TZK3 123 aa2.07□□□□□ -2.08
SCN3A-207ENST00000471697 LYZL1Q6UWQ5 148 aa2.07□□□□□ -2.08
SCN3A-207ENST00000471697 KLF14Q8TD94 323 aaPredicted RBP2.07□□□□□ -2.08
SCN3A-207ENST00000471697 FREM3P0C091 2139 aa2.06□□□□□ -2.08
SCN3A-207ENST00000471697 DEPDC5O75140 1603 aa2.06□□□□□ -2.08
SCN3A-207ENST00000471697 LRP6O75581 1613 aa2.06□□□□□ -2.08
SCN3A-207ENST00000471697 MUC22E2RYF6 1773 aaPredicted RBP2.06□□□□□ -2.08
SCN3A-207ENST00000471697 COL5A1P20908 1838 aaPredicted RBP2.06□□□□□ -2.08
SCN3A-207ENST00000471697 A0A087WSZ3 146 aa2.06□□□□□ -2.08
SCN3A-207ENST00000471697 IGKV2D-26A0A0A0MRZ7 120 aa2.06□□□□□ -2.08
SCN3A-207ENST00000471697 CXorf51AA0A1B0GTR3 108 aa2.06□□□□□ -2.08
SCN3A-207ENST00000471697 B4DSR2 109 aa2.06□□□□□ -2.08
SCN3A-207ENST00000471697 C5orf67F2Z3F1 127 aa2.06□□□□□ -2.08
SCN3A-207ENST00000471697 H7C2G1 150 aa2.06□□□□□ -2.08
SCN3A-207ENST00000471697 K7EMI3 77 aa2.06□□□□□ -2.08
SCN3A-207ENST00000471697 NDUFB1O75438 58 aa2.06□□□□□ -2.08
SCN3A-207ENST00000471697 DNAL4O96015 105 aa2.06□□□□□ -2.08
SCN3A-207ENST00000471697 CISD3P0C7P0 127 aa2.06□□□□□ -2.08
SCN3A-207ENST00000471697 ARMS2P0C7Q2 107 aa2.06□□□□□ -2.08
SCN3A-207ENST00000471697 GDF5OSQ5U4N7 250 aa2.06□□□□□ -2.08
SCN3A-207ENST00000471697 Q5VV11 94 aa2.06□□□□□ -2.08
SCN3A-207ENST00000471697 Q6ZQT0 140 aa2.06□□□□□ -2.08
SCN3A-207ENST00000471697 CDC42SE2Q9NRR3 84 aa2.06□□□□□ -2.08
SCN3A-207ENST00000471697 C22orf24Q9Y442 160 aa2.06□□□□□ -2.08
SCN3A-207ENST00000471697 CACNA1DQ01668 2161 aa2.06□□□□□ -2.08
SCN3A-207ENST00000471697 BCORQ6W2J9 1755 aa2.05□□□□□ -2.08
SCN3A-207ENST00000471697 A0A0J9YX75 114 aa2.05□□□□□ -2.08
SCN3A-207ENST00000471697 E7EUB6 86 aa2.05□□□□□ -2.08
SCN3A-207ENST00000471697 PSCAO43653 123 aa2.05□□□□□ -2.08
SCN3A-207ENST00000471697 ZNF861PO60384 105 aa2.05□□□□□ -2.08
SCN3A-207ENST00000471697 IGHV3-30P01768 117 aa2.05□□□□□ -2.08
SCN3A-207ENST00000471697 CRPP02741 224 aa2.05□□□□□ -2.08
SCN3A-207ENST00000471697 BAALC-AS2P0C853 105 aa2.05□□□□□ -2.08
SCN3A-207ENST00000471697 IGHV3-30-5P0DP03 117 aa2.05□□□□□ -2.08
SCN3A-207ENST00000471697 DEFA4P12838 97 aa2.05□□□□□ -2.08
SCN3A-207ENST00000471697 NNATQ16517 81 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms