RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 NTF3P20783 257 aa5.69□□□□□ -1.5
CPSF4-211ENST00000471455 TEX261Q6UWH6 196 aa5.69□□□□□ -1.5
CPSF4-211ENST00000471455 TMEM101Q96IK0 257 aa5.69□□□□□ -1.5
CPSF4-211ENST00000471455 CARD19Q96LW7 228 aa5.69□□□□□ -1.5
CPSF4-211ENST00000471455 GNG13Q9P2W3 67 aa5.69□□□□□ -1.5
CPSF4-211ENST00000471455 PDE6DO43924 150 aa5.68□□□□□ -1.5
CPSF4-211ENST00000471455 CTRLP40313 264 aa5.68□□□□□ -1.5
CPSF4-211ENST00000471455 KRTAP10-8P60410 259 aa5.68□□□□□ -1.5
CPSF4-211ENST00000471455 CCL20P78556 96 aa5.68□□□□□ -1.5
CPSF4-211ENST00000471455 ODF1Q14990 250 aa5.68□□□□□ -1.5
CPSF4-211ENST00000471455 TWIST1Q15672 202 aa5.68□□□□□ -1.5
CPSF4-211ENST00000471455 LYZL1Q6UWQ5 148 aa5.68□□□□□ -1.5
CPSF4-211ENST00000471455 OR5A1Q8NGJ0 315 aa5.68□□□□□ -1.5
CPSF4-211ENST00000471455 ISOC2Q96AB3 205 aa5.68□□□□□ -1.5
CPSF4-211ENST00000471455 FAM231BA6NCW3 169 aa5.67□□□□□ -1.5
CPSF4-211ENST00000471455 G3V3Q6 166 aa5.67□□□□□ -1.5
CPSF4-211ENST00000471455 BCL2L11O43521 198 aa5.67□□□□□ -1.5
CPSF4-211ENST00000471455 FGF6P10767 208 aa5.67□□□□□ -1.5
CPSF4-211ENST00000471455 XCL1P47992 114 aa5.67□□□□□ -1.5
CPSF4-211ENST00000471455 FOXI1Q12951 378 aa5.67□□□□□ -1.5
CPSF4-211ENST00000471455 EIF5AL1Q6IS14 154 aaKnown RBP5.67□□□□□ -1.5
CPSF4-211ENST00000471455 C9orf62Q8N4C0 152 aa5.67□□□□□ -1.5
CPSF4-211ENST00000471455 FAM210AQ96ND0 272 aa5.67□□□□□ -1.5
CPSF4-211ENST00000471455 CNFNQ9BYD5 112 aa5.67□□□□□ -1.5
CPSF4-211ENST00000471455 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.66□□□□□ -1.5
CPSF4-211ENST00000471455 TRAV1-1A0A0B4J248 108 aa5.66□□□□□ -1.5
CPSF4-211ENST00000471455 IGKV2-29A2NJV5 120 aaPredicted RBP5.66□□□□□ -1.5
CPSF4-211ENST00000471455 MEF2BQ02080 365 aaPredicted RBP5.66□□□□□ -1.5
CPSF4-211ENST00000471455 SYCNQ0VAF6 134 aa5.66□□□□□ -1.5
CPSF4-211ENST00000471455 SS18Q15532 418 aa5.66□□□□□ -1.5
CPSF4-211ENST00000471455 Q6ZNX1 250 aa5.66□□□□□ -1.5
CPSF4-211ENST00000471455 GATD1Q8NB37 220 aa5.66□□□□□ -1.5
CPSF4-211ENST00000471455 BATF3Q9NR55 127 aa5.66□□□□□ -1.5
CPSF4-211ENST00000471455 LOC107984640A0A0U1RRK4 108 aa5.65□□□□□ -1.5
CPSF4-211ENST00000471455 SDHAF1A6NFY7 115 aa5.65□□□□□ -1.5
CPSF4-211ENST00000471455 HMSDA8MTL9 139 aa5.65□□□□□ -1.5
CPSF4-211ENST00000471455 I3L3M4 83 aa5.65□□□□□ -1.5
CPSF4-211ENST00000471455 CCL25O15444 150 aa5.65□□□□□ -1.5
CPSF4-211ENST00000471455 GAS8-AS1O95177 125 aa5.65□□□□□ -1.5
CPSF4-211ENST00000471455 SRSF9Q13242 221 aaKnown RBP eCLIP5.65□□□□□ -1.5
CPSF4-211ENST00000471455 ZNF664Q8N3J9 261 aa5.65□□□□□ -1.5
CPSF4-211ENST00000471455 MRAP2Q96G30 205 aa5.65□□□□□ -1.5
CPSF4-211ENST00000471455 RPP21Q9H633 154 aaKnown RBP5.65□□□□□ -1.5
CPSF4-211ENST00000471455 MED9Q9NWA0 146 aa5.65□□□□□ -1.5
CPSF4-211ENST00000471455 TRAV26-2A0A0B4J265 109 aa5.64□□□□□ -1.51
CPSF4-211ENST00000471455 LINC00959A0A1B0GUT2 108 aa5.64□□□□□ -1.51
CPSF4-211ENST00000471455 RAB19A4D1S5 217 aa5.64□□□□□ -1.51
CPSF4-211ENST00000471455 MT-ND6P03923 174 aa5.64□□□□□ -1.51
CPSF4-211ENST00000471455 PMCHP20382 165 aa5.64□□□□□ -1.51
CPSF4-211ENST00000471455 TAGLN2P37802 199 aaKnown RBP5.64□□□□□ -1.51
CPSF4-211ENST00000471455 CAMPP49913 170 aa5.64□□□□□ -1.51
CPSF4-211ENST00000471455 SMAGPQ0VAQ4 97 aa5.64□□□□□ -1.51
CPSF4-211ENST00000471455 RGS21Q2M5E4 152 aa5.64□□□□□ -1.51
CPSF4-211ENST00000471455 CD164L2Q6UWJ8 174 aa5.64□□□□□ -1.51
CPSF4-211ENST00000471455 MALP21145 153 aa5.63□□□□□ -1.51
CPSF4-211ENST00000471455 GAGE2BQ13066 116 aa5.63□□□□□ -1.51
CPSF4-211ENST00000471455 TSKUQ8WUA8 353 aa5.63□□□□□ -1.51
CPSF4-211ENST00000471455 BORCS7Q96B45 105 aa5.63□□□□□ -1.51
CPSF4-211ENST00000471455 RPL39LQ96EH5 51 aaKnown RBP5.63□□□□□ -1.51
CPSF4-211ENST00000471455 PSORS1C2Q9UIG4 136 aa5.63□□□□□ -1.51
CPSF4-211ENST00000471455 IGLV4-69A0A075B6H9 119 aa5.62□□□□□ -1.51
CPSF4-211ENST00000471455 TRBV6-5A0A0K0K1A5 114 aa5.62□□□□□ -1.51
CPSF4-211ENST00000471455 SMLR1H3BR10 107 aa5.62□□□□□ -1.51
CPSF4-211ENST00000471455 APOMO95445 188 aa5.62□□□□□ -1.51
CPSF4-211ENST00000471455 BCL2P10415 239 aa5.62□□□□□ -1.51
CPSF4-211ENST00000471455 CAMK2N2Q96S95 79 aa5.62□□□□□ -1.51
CPSF4-211ENST00000471455 ST20Q9HBF5 79 aa5.62□□□□□ -1.51
CPSF4-211ENST00000471455 TRBV20OR9-2A0A075B6H5 130 aa5.61□□□□□ -1.51
CPSF4-211ENST00000471455 C7orf77A4D0Y5 90 aa5.61□□□□□ -1.51
CPSF4-211ENST00000471455 C1orf196B1AJZ1 125 aa5.61□□□□□ -1.51
CPSF4-211ENST00000471455 COX7A2LO14548 114 aa5.61□□□□□ -1.51
CPSF4-211ENST00000471455 MRPL52Q86TS9 123 aaKnown RBP5.61□□□□□ -1.51
CPSF4-211ENST00000471455 DIRC1Q969H9 104 aa5.61□□□□□ -1.51
CPSF4-211ENST00000471455 LINC00526Q96FQ7 95 aa5.61□□□□□ -1.51
CPSF4-211ENST00000471455 ESDP10768 282 aa5.6□□□□□ -1.51
CPSF4-211ENST00000471455 C1orf137Q5JT78 98 aa5.6□□□□□ -1.51
CPSF4-211ENST00000471455 C2orf48Q96LS8 159 aa5.6□□□□□ -1.51
CPSF4-211ENST00000471455 RNASE7Q9H1E1 156 aaKnown RBP5.6□□□□□ -1.51
CPSF4-211ENST00000471455 CDC42SE2Q9NRR3 84 aa5.6□□□□□ -1.51
CPSF4-211ENST00000471455 TMEM242Q9NWH2 141 aa5.6□□□□□ -1.51
CPSF4-211ENST00000471455 A0A0U1RQV1 116 aa5.59□□□□□ -1.51
CPSF4-211ENST00000471455 A8MWL6 223 aa5.59□□□□□ -1.51
CPSF4-211ENST00000471455 GATCO43716 136 aaKnown RBP5.59□□□□□ -1.51
CPSF4-211ENST00000471455 PPP1R17O96001 155 aa5.59□□□□□ -1.51
CPSF4-211ENST00000471455 TSHBP01222 138 aa5.59□□□□□ -1.51
CPSF4-211ENST00000471455 FCER1GP30273 86 aa5.59□□□□□ -1.51
CPSF4-211ENST00000471455 RPL18AQ02543 176 aaKnown RBP5.59□□□□□ -1.51
CPSF4-211ENST00000471455 C9orf116Q5BN46 136 aaPredicted RBP5.59□□□□□ -1.51
CPSF4-211ENST00000471455 KRTAP5-3Q6L8H2 238 aa5.59□□□□□ -1.51
CPSF4-211ENST00000471455 NUP35Q8NFH5 326 aa5.59□□□□□ -1.51
CPSF4-211ENST00000471455 TRBV27A0A0K0K1C4 114 aa5.58□□□□□ -1.52
CPSF4-211ENST00000471455 CSDC2Q9Y534 153 aaKnown RBP5.58□□□□□ -1.52
CPSF4-211ENST00000471455 IGLV1-50A0A075B6I6 118 aa5.57□□□□□ -1.52
CPSF4-211ENST00000471455 A0A1W2PNN7 141 aa5.57□□□□□ -1.52
CPSF4-211ENST00000471455 F8WDY8 70 aa5.57□□□□□ -1.52
CPSF4-211ENST00000471455 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.57□□□□□ -1.52
CPSF4-211ENST00000471455 K7EN84 100 aa5.57□□□□□ -1.52
CPSF4-211ENST00000471455 VCYO14598 125 aa5.57□□□□□ -1.52
CPSF4-211ENST00000471455 FOXA3P55318 350 aaPredicted RBP5.57□□□□□ -1.52
CPSF4-211ENST00000471455 SPAG11BQ08648 103 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms