RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 MUC22E2RYF6 1773 aaPredicted RBP-1.67□□□□□ -2.68
COMMD3-209ENST00000471350 TMEM2Q9UHN6 1383 aa-1.67□□□□□ -2.68
COMMD3-209ENST00000471350 SPTSSAQ969W0 71 aa-1.67□□□□□ -2.68
COMMD3-209ENST00000471350 AQP10Q96PS8 301 aa-1.67□□□□□ -2.68
COMMD3-209ENST00000471350 SEC11CQ9BY50 192 aa-1.67□□□□□ -2.68
COMMD3-209ENST00000471350 LENEPQ9Y5L5 61 aa-1.67□□□□□ -2.68
COMMD3-209ENST00000471350 LAMA1P25391 3075 aa-1.68□□□□□ -2.68
COMMD3-209ENST00000471350 UQCR11O14957 56 aa-1.68□□□□□ -2.68
COMMD3-209ENST00000471350 SIX6O95475 246 aa-1.68□□□□□ -2.68
COMMD3-209ENST00000471350 G0S2P27469 103 aa-1.68□□□□□ -2.68
COMMD3-209ENST00000471350 TPPP2P59282 170 aa-1.68□□□□□ -2.68
COMMD3-209ENST00000471350 S100A7L2Q5SY68 101 aa-1.68□□□□□ -2.68
COMMD3-209ENST00000471350 BAGE2Q86Y30 109 aa-1.68□□□□□ -2.68
COMMD3-209ENST00000471350 SHANK2Q9UPX8 1470 aa-1.69□□□□□ -2.68
COMMD3-209ENST00000471350 AKAP9Q99996 3911 aa-1.69□□□□□ -2.68
COMMD3-209ENST00000471350 TRBV7-4A0A0J9YYF1 115 aa-1.69□□□□□ -2.68
COMMD3-209ENST00000471350 PITX3O75364 302 aa-1.69□□□□□ -2.68
COMMD3-209ENST00000471350 E2F6O75461 281 aa-1.69□□□□□ -2.68
COMMD3-209ENST00000471350 NDUFB6O95139 128 aa-1.69□□□□□ -2.68
COMMD3-209ENST00000471350 MT1AP04731 61 aa-1.69□□□□□ -2.68
COMMD3-209ENST00000471350 USMG5Q96IX5 58 aa-1.69□□□□□ -2.68
COMMD3-209ENST00000471350 AMELXQ99217 191 aa-1.69□□□□□ -2.68
COMMD3-209ENST00000471350 CENPHQ9H3R5 247 aa-1.69□□□□□ -2.68
COMMD3-209ENST00000471350 TNRC18O15417 2968 aaPredicted RBP-1.69□□□□□ -2.68
COMMD3-209ENST00000471350 RNF213Q63HN8 5207 aa-1.7□□□□□ -2.68
COMMD3-209ENST00000471350 HIST1H1AQ02539 215 aaPredicted RBP-1.7□□□□□ -2.68
COMMD3-209ENST00000471350 DOCK1Q14185 1865 aa-1.7□□□□□ -2.68
COMMD3-209ENST00000471350 C10orf128Q5T292 105 aa-1.7□□□□□ -2.68
COMMD3-209ENST00000471350 Q6AWC8 147 aa-1.7□□□□□ -2.68
COMMD3-209ENST00000471350 TAC4Q86UU9 113 aa-1.7□□□□□ -2.68
COMMD3-209ENST00000471350 KNL1Q8NG31 2342 aa-1.7□□□□□ -2.68
COMMD3-209ENST00000471350 APLNQ9ULZ1 77 aa-1.7□□□□□ -2.68
COMMD3-209ENST00000471350 PLECQ15149 4684 aaKnown RBP-1.71□□□□□ -2.68
COMMD3-209ENST00000471350 PRRC2CQ9Y520 2896 aaKnown RBP-1.71□□□□□ -2.68
COMMD3-209ENST00000471350 PIGBOS1A0A0B4J2F0 54 aa-1.71□□□□□ -2.68
COMMD3-209ENST00000471350 SPAARA0A1B0GVQ0 90 aa-1.71□□□□□ -2.68
COMMD3-209ENST00000471350 DBIP07108 87 aaKnown RBP-1.71□□□□□ -2.68
COMMD3-209ENST00000471350 GNG10P50151 68 aa-1.71□□□□□ -2.68
COMMD3-209ENST00000471350 RRAS2P62070 204 aaPredicted RBP-1.71□□□□□ -2.68
COMMD3-209ENST00000471350 CCDC153Q494R4 210 aa-1.71□□□□□ -2.68
COMMD3-209ENST00000471350 HSPB11Q9Y547 144 aa-1.71□□□□□ -2.68
COMMD3-209ENST00000471350 F8VRH5 84 aa-1.72□□□□□ -2.68
COMMD3-209ENST00000471350 TSTD3H0UI37 97 aa-1.72□□□□□ -2.68
COMMD3-209ENST00000471350 M0R129 80 aa-1.72□□□□□ -2.68
COMMD3-209ENST00000471350 Q6ZUT4 128 aa-1.72□□□□□ -2.68
COMMD3-209ENST00000471350 SMPXQ9UHP9 88 aa-1.72□□□□□ -2.68
COMMD3-209ENST00000471350 V9GYQ6 96 aa-1.72□□□□□ -2.68
COMMD3-209ENST00000471350 IFT140Q96RY7 1462 aa-1.72□□□□□ -2.68
COMMD3-209ENST00000471350 KDM5AP29375 1690 aaKnown RBP-1.72□□□□□ -2.68
COMMD3-209ENST00000471350 XIRP1Q702N8 1843 aaKnown RBP-1.73□□□□□ -2.69
COMMD3-209ENST00000471350 MYOM3Q5VTT5 1437 aa-1.73□□□□□ -2.69
COMMD3-209ENST00000471350 PRDM2Q13029 1718 aa-1.73□□□□□ -2.69
COMMD3-209ENST00000471350 TRAV13-2A0A0B4J235 113 aa-1.73□□□□□ -2.69
COMMD3-209ENST00000471350 ARPC5O15511 151 aa-1.73□□□□□ -2.69
COMMD3-209ENST00000471350 ALX1Q15699 326 aa-1.73□□□□□ -2.69
COMMD3-209ENST00000471350 C9orf62Q8N4C0 152 aa-1.73□□□□□ -2.69
COMMD3-209ENST00000471350 SPANXA1Q9NS26 97 aa-1.73□□□□□ -2.69
COMMD3-209ENST00000471350 SYNJ1O43426 1573 aa-1.73□□□□□ -2.69
COMMD3-209ENST00000471350 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.73□□□□□ -2.691e-7■■■■□ 21.5
COMMD3-209ENST00000471350 CUBNO60494 3623 aa-1.73□□□□□ -2.69
COMMD3-209ENST00000471350 ARHGEF12Q9NZN5 1544 aa-1.74□□□□□ -2.69
COMMD3-209ENST00000471350 ZNF236Q9UL36 1845 aa-1.74□□□□□ -2.69
COMMD3-209ENST00000471350 CPSF4LA6NMK7 179 aaKnown RBP-1.74□□□□□ -2.69
COMMD3-209ENST00000471350 HCG22E2RYF7 251 aa-1.74□□□□□ -2.69
COMMD3-209ENST00000471350 TTC9CQ8N5M4 171 aa-1.74□□□□□ -2.69
COMMD3-209ENST00000471350 SETBP1Q9Y6X0 1596 aa-1.74□□□□□ -2.69
COMMD3-209ENST00000471350 TULP4Q9NRJ4 1543 aa-1.75□□□□□ -2.69
COMMD3-209ENST00000471350 FAM236AA0A1B0GUQ0 79 aa-1.75□□□□□ -2.69
COMMD3-209ENST00000471350 FAM236BA0A1B0GV22 79 aa-1.75□□□□□ -2.69
COMMD3-209ENST00000471350 S100A5P33763 92 aa-1.75□□□□□ -2.69
COMMD3-209ENST00000471350 MORN2Q502X0 79 aa-1.75□□□□□ -2.69
COMMD3-209ENST00000471350 DDA1Q9BW61 102 aa-1.75□□□□□ -2.69
COMMD3-209ENST00000471350 NAA60Q9H7X0 242 aa-1.75□□□□□ -2.69
COMMD3-209ENST00000471350 NDUFA4L2Q9NRX3 87 aa-1.75□□□□□ -2.69
COMMD3-209ENST00000471350 GINS2Q9Y248 185 aa-1.75□□□□□ -2.69
COMMD3-209ENST00000471350 AKAP13Q12802 2813 aa-1.76□□□□□ -2.69
COMMD3-209ENST00000471350 H0YGG7 62 aa-1.76□□□□□ -2.69
COMMD3-209ENST00000471350 B2MP61769 119 aa-1.76□□□□□ -2.69
COMMD3-209ENST00000471350 CDC26Q8NHZ8 85 aa-1.76□□□□□ -2.69
COMMD3-209ENST00000471350 NIPBLQ6KC79 2804 aaeCLIP-1.76□□□□□ -2.69
COMMD3-209ENST00000471350 OVOS2A0A0J9YW53 1432 aa-1.76□□□□□ -2.69
COMMD3-209ENST00000471350 OVOS2Q6IE36 1432 aa-1.76□□□□□ -2.69
COMMD3-209ENST00000471350 ZNF518AQ6AHZ1 1483 aa-1.76□□□□□ -2.69
COMMD3-209ENST00000471350 KIAA0556O60303 1618 aa-1.77□□□□□ -2.69
COMMD3-209ENST00000471350 J3QR89 54 aa-1.77□□□□□ -2.69
COMMD3-209ENST00000471350 SSSCA1O60232 199 aa-1.77□□□□□ -2.69
COMMD3-209ENST00000471350 LINC01558Q9Y6Z2 57 aa-1.77□□□□□ -2.69
COMMD3-209ENST00000471350 DISP2A7MBM2 1401 aa-1.77□□□□□ -2.69
COMMD3-209ENST00000471350 ADGRB1O14514 1584 aa-1.77□□□□□ -2.69
COMMD3-209ENST00000471350 NWD2Q9ULI1 1742 aa-1.77□□□□□ -2.69
COMMD3-209ENST00000471350 ANKRD11Q6UB99 2663 aaPredicted RBP-1.78□□□□□ -2.69
COMMD3-209ENST00000471350 LINC00959A0A1B0GUT2 108 aa-1.78□□□□□ -2.69
COMMD3-209ENST00000471350 IGLC6P0CF74 106 aa-1.78□□□□□ -2.69
COMMD3-209ENST00000471350 Q8N8P6 123 aa-1.78□□□□□ -2.69
COMMD3-209ENST00000471350 TMEM263Q8WUH6 116 aaKnown RBP-1.78□□□□□ -2.69
COMMD3-209ENST00000471350 PPIP5K1Q6PFW1 1433 aa-1.78□□□□□ -2.69
COMMD3-209ENST00000471350 KIF21AQ7Z4S6 1674 aa-1.78□□□□□ -2.69
COMMD3-209ENST00000471350 SBF2Q86WG5 1849 aa-1.78□□□□□ -2.69
COMMD3-209ENST00000471350 ACACAQ13085 2346 aa-1.78□□□□□ -2.69
COMMD3-209ENST00000471350 IGLC7A0M8Q6 106 aa-1.79□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms