RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 CIRBPQ14011 172 aaKnown RBP9.78□□□□□ -0.84
COL1A1-203ENST00000471344 UQCC3Q6UW78 93 aa9.78□□□□□ -0.84
COL1A1-203ENST00000471344 AP5S1Q9NUS5 200 aa9.78□□□□□ -0.84
COL1A1-203ENST00000471344 HMCN2Q8NDA2 5059 aa9.78□□□□□ -0.84
COL1A1-203ENST00000471344 ESDP10768 282 aa9.77□□□□□ -0.85
COL1A1-203ENST00000471344 RAB4AP20338 218 aa9.77□□□□□ -0.85
COL1A1-203ENST00000471344 MRPL54Q6P161 138 aaKnown RBP9.77□□□□□ -0.85
COL1A1-203ENST00000471344 ST20Q9HBF5 79 aa9.77□□□□□ -0.85
COL1A1-203ENST00000471344 A0A1B0GXF2 115 aa9.76□□□□□ -0.85
COL1A1-203ENST00000471344 ZNF25P17030 456 aaPredicted RBP9.76□□□□□ -0.85
COL1A1-203ENST00000471344 CAMPP49913 170 aa9.76□□□□□ -0.85
COL1A1-203ENST00000471344 PNRC1Q12796 327 aaPredicted RBP9.76□□□□□ -0.85
COL1A1-203ENST00000471344 FOXI1Q12951 378 aa9.76□□□□□ -0.85
COL1A1-203ENST00000471344 RIGQ13278 110 aa9.76□□□□□ -0.85
COL1A1-203ENST00000471344 SPACA4Q8TDM5 124 aa9.76□□□□□ -0.85
COL1A1-203ENST00000471344 MRAP2Q96G30 205 aa9.76□□□□□ -0.85
COL1A1-203ENST00000471344 A0A087WYN8 130 aa9.75□□□□□ -0.85
COL1A1-203ENST00000471344 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.75□□□□□ -0.85
COL1A1-203ENST00000471344 F8W036 122 aa9.75□□□□□ -0.85
COL1A1-203ENST00000471344 XCL1P47992 114 aa9.75□□□□□ -0.85
COL1A1-203ENST00000471344 POLR2KP53803 58 aaKnown RBP9.75□□□□□ -0.85
COL1A1-203ENST00000471344 TRBV27A0A0K0K1C4 114 aa9.74□□□□□ -0.85
COL1A1-203ENST00000471344 COX6A2Q02221 97 aa9.74□□□□□ -0.85
COL1A1-203ENST00000471344 CFAP161Q6P656 301 aa9.74□□□□□ -0.85
COL1A1-203ENST00000471344 OR5A1Q8NGJ0 315 aa9.74□□□□□ -0.85
COL1A1-203ENST00000471344 LINC00526Q96FQ7 95 aa9.74□□□□□ -0.85
COL1A1-203ENST00000471344 GVQW2A0A096LPI5 108 aaPredicted RBP9.73□□□□□ -0.85
COL1A1-203ENST00000471344 LINC00959A0A1B0GUT2 108 aa9.73□□□□□ -0.85
COL1A1-203ENST00000471344 CCL25O15444 150 aa9.73□□□□□ -0.85
COL1A1-203ENST00000471344 PPP1R17O96001 155 aa9.73□□□□□ -0.85
COL1A1-203ENST00000471344 MRPL51Q4U2R6 128 aaKnown RBP9.73□□□□□ -0.85
COL1A1-203ENST00000471344 NRACQ8N912 160 aa9.73□□□□□ -0.85
COL1A1-203ENST00000471344 PRSS3P2Q8NHM4 247 aa9.73□□□□□ -0.85
COL1A1-203ENST00000471344 BTF3L4Q96K17 158 aa9.73□□□□□ -0.85
COL1A1-203ENST00000471344 PPP1R2P9O14990 202 aa9.72□□□□□ -0.85
COL1A1-203ENST00000471344 MT-ND4LP03901 98 aa9.72□□□□□ -0.85
COL1A1-203ENST00000471344 C10orf91Q5T1B1 145 aa9.72□□□□□ -0.85
COL1A1-203ENST00000471344 FAM104BQ5XKR9 115 aa9.72□□□□□ -0.85
COL1A1-203ENST00000471344 DPH3Q96FX2 82 aa9.72□□□□□ -0.85
COL1A1-203ENST00000471344 TMEM101Q96IK0 257 aa9.72□□□□□ -0.85
COL1A1-203ENST00000471344 SEC11CQ9BY50 192 aa9.72□□□□□ -0.85
COL1A1-203ENST00000471344 IGKV2-24A0A0C4DH68 120 aa9.71□□□□□ -0.86
COL1A1-203ENST00000471344 C7orf77A4D0Y5 90 aa9.71□□□□□ -0.86
COL1A1-203ENST00000471344 OXTP01178 125 aa9.71□□□□□ -0.86
COL1A1-203ENST00000471344 HBBP68871 147 aa9.71□□□□□ -0.86
COL1A1-203ENST00000471344 RNASE13Q5GAN3 156 aaKnown RBP9.71□□□□□ -0.86
COL1A1-203ENST00000471344 MRPL52Q86TS9 123 aaKnown RBP9.71□□□□□ -0.86
COL1A1-203ENST00000471344 ANAPC16Q96DE5 110 aa9.71□□□□□ -0.86
COL1A1-203ENST00000471344 CDC42SE2Q9NRR3 84 aa9.71□□□□□ -0.86
COL1A1-203ENST00000471344 VCYO14598 125 aa9.7□□□□□ -0.86
COL1A1-203ENST00000471344 PLAC8Q9NZF1 115 aa9.7□□□□□ -0.86
COL1A1-203ENST00000471344 A0A096LNI7 61 aa9.69□□□□□ -0.86
COL1A1-203ENST00000471344 A0A1B0GW15 77 aa9.69□□□□□ -0.86
COL1A1-203ENST00000471344 MAJINQ3KP22 176 aa9.69□□□□□ -0.86
COL1A1-203ENST00000471344 ZNF664Q8N3J9 261 aa9.69□□□□□ -0.86
COL1A1-203ENST00000471344 CARHSP1Q9Y2V2 147 aaKnown RBP9.69□□□□□ -0.86
COL1A1-203ENST00000471344 PHOX2AO14813 284 aa9.68□□□□□ -0.86
COL1A1-203ENST00000471344 FCER1GP30273 86 aa9.68□□□□□ -0.86
COL1A1-203ENST00000471344 SUMO2P61956 95 aaKnown RBP9.68□□□□□ -0.86
COL1A1-203ENST00000471344 D6R8Y8 96 aa9.67□□□□□ -0.86
COL1A1-203ENST00000471344 NPYP01303 97 aa9.67□□□□□ -0.86
COL1A1-203ENST00000471344 Q6ZUT4 128 aa9.67□□□□□ -0.86
COL1A1-203ENST00000471344 KIR2DL4Q99706 377 aa9.67□□□□□ -0.86
COL1A1-203ENST00000471344 UBE2D4Q9Y2X8 147 aa9.67□□□□□ -0.86
COL1A1-203ENST00000471344 CSDC2Q9Y534 153 aaKnown RBP9.67□□□□□ -0.86
COL1A1-203ENST00000471344 TNXBP22105 4242 aa9.67□□□□□ -0.86
COL1A1-203ENST00000471344 IGHV1-58A0A0C4DH39 117 aa9.66□□□□□ -0.86
COL1A1-203ENST00000471344 SMAGPQ0VAQ4 97 aa9.66□□□□□ -0.86
COL1A1-203ENST00000471344 SS18Q15532 418 aa9.66□□□□□ -0.86
COL1A1-203ENST00000471344 CD164L2Q6UWJ8 174 aa9.66□□□□□ -0.86
COL1A1-203ENST00000471344 ATP5L2Q7Z4Y8 100 aa9.66□□□□□ -0.86
COL1A1-203ENST00000471344 TRBV24-1A0A075B6N3 115 aa9.65□□□□□ -0.86
COL1A1-203ENST00000471344 S100A8P05109 93 aa9.65□□□□□ -0.86
COL1A1-203ENST00000471344 MT1HL1P0DM35 61 aa9.65□□□□□ -0.86
COL1A1-203ENST00000471344 RPL32P62910 135 aaKnown RBP9.65□□□□□ -0.86
COL1A1-203ENST00000471344 STPG4Q8N801 248 aa9.65□□□□□ -0.86
COL1A1-203ENST00000471344 CARD19Q96LW7 228 aa9.65□□□□□ -0.86
COL1A1-203ENST00000471344 C20orf78Q9BR46 151 aa9.65□□□□□ -0.86
COL1A1-203ENST00000471344 TNFRSF6BO95407 300 aa9.64□□□□□ -0.87
COL1A1-203ENST00000471344 CKS2P33552 79 aa9.64□□□□□ -0.87
COL1A1-203ENST00000471344 RPL39P62891 51 aaKnown RBP9.64□□□□□ -0.87
COL1A1-203ENST00000471344 TRAV13-1A0A0B4J241 112 aa9.63□□□□□ -0.87
COL1A1-203ENST00000471344 TCAPO15273 167 aa9.63□□□□□ -0.87
COL1A1-203ENST00000471344 TMEM136Q6ZRR5 245 aa9.63□□□□□ -0.87
COL1A1-203ENST00000471344 FAM104AQ969W3 186 aa9.63□□□□□ -0.87
COL1A1-203ENST00000471344 TMEM18Q96B42 140 aa9.63□□□□□ -0.87
COL1A1-203ENST00000471344 CTDSP1Q9GZU7 261 aa9.63□□□□□ -0.87
COL1A1-203ENST00000471344 C1orf196B1AJZ1 125 aa9.62□□□□□ -0.87
COL1A1-203ENST00000471344 SLC7A5P1Q8MH63 180 aa9.62□□□□□ -0.87
COL1A1-203ENST00000471344 C7orf33Q8WU49 177 aa9.62□□□□□ -0.87
COL1A1-203ENST00000471344 IMMP2LQ96T52 175 aa9.62□□□□□ -0.87
COL1A1-203ENST00000471344 TIMM21Q9BVV7 248 aa9.62□□□□□ -0.87
COL1A1-203ENST00000471344 RPS10P5Q9NQ39 176 aa9.62□□□□□ -0.87
COL1A1-203ENST00000471344 UBR4Q5T4S7 5183 aa9.61□□□□□ -0.87
COL1A1-203ENST00000471344 IGLV4-69A0A075B6H9 119 aa9.61□□□□□ -0.87
COL1A1-203ENST00000471344 ZNF561-AS1K7EIQ3 104 aa9.61□□□□□ -0.87
COL1A1-203ENST00000471344 APOC3P02656 99 aa9.61□□□□□ -0.87
COL1A1-203ENST00000471344 PPBPP02775 128 aa9.61□□□□□ -0.87
COL1A1-203ENST00000471344 SYCNQ0VAF6 134 aa9.61□□□□□ -0.87
COL1A1-203ENST00000471344 SERTAD4-AS1Q5TG53 156 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms