RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 UBE2L6O14933 153 aa6.54□□□□□ -1.36
VPS52-216ENST00000471309 FGF6P10767 208 aa6.54□□□□□ -1.36
VPS52-216ENST00000471309 HTN3P15516 51 aa6.54□□□□□ -1.36
VPS52-216ENST00000471309 ZNF25P17030 456 aaPredicted RBP6.54□□□□□ -1.36
VPS52-216ENST00000471309 ANKRD39Q53RE8 183 aa6.54□□□□□ -1.36
VPS52-216ENST00000471309 CEMP1Q6PRD7 247 aaPredicted RBP6.54□□□□□ -1.36
VPS52-216ENST00000471309 Q6ZUT4 128 aa6.54□□□□□ -1.36
VPS52-216ENST00000471309 SH2D6Q7Z4S9 175 aa6.54□□□□□ -1.36
VPS52-216ENST00000471309 MIEN1Q9BRT3 115 aa6.54□□□□□ -1.36
VPS52-216ENST00000471309 ICOSQ9Y6W8 199 aa6.54□□□□□ -1.36
VPS52-216ENST00000471309 MRPL23Q16540 153 aaKnown RBP6.53□□□□□ -1.36
VPS52-216ENST00000471309 ZC2HC1BQ5TFG8 222 aa6.53□□□□□ -1.36
VPS52-216ENST00000471309 DGAT2L7PQ6IED9 249 aa6.53□□□□□ -1.36
VPS52-216ENST00000471309 Q6ZTC4 211 aa6.53□□□□□ -1.36
VPS52-216ENST00000471309 NFE4Q86UQ8 179 aa6.53□□□□□ -1.36
VPS52-216ENST00000471309 STPG4Q8N801 248 aa6.53□□□□□ -1.36
VPS52-216ENST00000471309 C11orf45Q8TAV5 145 aa6.53□□□□□ -1.36
VPS52-216ENST00000471309 MRAPQ8TCY5 172 aa6.53□□□□□ -1.36
VPS52-216ENST00000471309 C2orf88Q9BSF0 95 aa6.53□□□□□ -1.36
VPS52-216ENST00000471309 PKD1L1Q8TDX9 2849 aa6.53□□□□□ -1.36
VPS52-216ENST00000471309 C11orf86A6NJI1 115 aa6.52□□□□□ -1.37
VPS52-216ENST00000471309 LINC00587B1AMM8 73 aa6.52□□□□□ -1.37
VPS52-216ENST00000471309 COX8AP10176 69 aa6.52□□□□□ -1.37
VPS52-216ENST00000471309 AMMECR1LQ6DCA0 310 aa6.52□□□□□ -1.37
VPS52-216ENST00000471309 LINC00528Q8N1L1 170 aa6.52□□□□□ -1.37
VPS52-216ENST00000471309 OR5A1Q8NGJ0 315 aa6.52□□□□□ -1.37
VPS52-216ENST00000471309 TMEM101Q96IK0 257 aa6.52□□□□□ -1.37
VPS52-216ENST00000471309 B9D2Q9BPU9 175 aa6.52□□□□□ -1.37
VPS52-216ENST00000471309 CHAC1Q9BUX1 264 aa6.52□□□□□ -1.37
VPS52-216ENST00000471309 SLC25A34Q6PIV7 304 aa6.51□□□□□ -1.37
VPS52-216ENST00000471309 C14orf144Q96I85 54 aa6.51□□□□□ -1.37
VPS52-216ENST00000471309 CHCHD5Q9BSY4 110 aa6.51□□□□□ -1.37
VPS52-216ENST00000471309 CDC42SE2Q9NRR3 84 aa6.51□□□□□ -1.37
VPS52-216ENST00000471309 A0A096LPF7 62 aa6.5□□□□□ -1.37
VPS52-216ENST00000471309 DLEU1O43261 78 aa6.5□□□□□ -1.37
VPS52-216ENST00000471309 UBE2D1P51668 147 aa6.5□□□□□ -1.37
VPS52-216ENST00000471309 TIRAPP58753 221 aa6.5□□□□□ -1.37
VPS52-216ENST00000471309 NANOS2P60321 138 aaKnown RBP6.5□□□□□ -1.37
VPS52-216ENST00000471309 GAGE6Q13070 117 aa6.5□□□□□ -1.37
VPS52-216ENST00000471309 RNASE13Q5GAN3 156 aaKnown RBP6.5□□□□□ -1.37
VPS52-216ENST00000471309 FAM19A3Q7Z5A8 133 aa6.5□□□□□ -1.37
VPS52-216ENST00000471309 DEFB131BA0A096LNP1 70 aa6.49□□□□□ -1.37
VPS52-216ENST00000471309 IGKV2D-26A0A0A0MRZ7 120 aa6.49□□□□□ -1.37
VPS52-216ENST00000471309 A0A0J9YXV3 536 aa6.49□□□□□ -1.37
VPS52-216ENST00000471309 TINCRA0A1B0GVN0 87 aa6.49□□□□□ -1.37
VPS52-216ENST00000471309 E9PLD3 99 aa6.49□□□□□ -1.37
VPS52-216ENST00000471309 ZNF22P17026 224 aaPredicted RBP6.49□□□□□ -1.37
VPS52-216ENST00000471309 NMUP48645 174 aa6.49□□□□□ -1.37
VPS52-216ENST00000471309 HNRNPA3P51991 378 aaKnown RBP6.49□□□□□ -1.37
VPS52-216ENST00000471309 HERVK_113P61574 105 aa6.49□□□□□ -1.37
VPS52-216ENST00000471309 LELP1Q5T871 98 aa6.49□□□□□ -1.37
VPS52-216ENST00000471309 BOD1L2Q8IYS8 172 aa6.49□□□□□ -1.37
VPS52-216ENST00000471309 IGLV5-45A0A087WSX0 123 aa6.48□□□□□ -1.37
VPS52-216ENST00000471309 TRAV10A0A0B4J240 114 aa6.48□□□□□ -1.37
VPS52-216ENST00000471309 A0A1B0GUV1 79 aa6.48□□□□□ -1.37
VPS52-216ENST00000471309 TCTAP57738 103 aa6.48□□□□□ -1.37
VPS52-216ENST00000471309 SEC11AP67812 179 aa6.48□□□□□ -1.37
VPS52-216ENST00000471309 DEFA6Q01524 100 aa6.48□□□□□ -1.37
VPS52-216ENST00000471309 TMEM170BQ5T4T1 132 aa6.48□□□□□ -1.37
VPS52-216ENST00000471309 TP73-AS1Q9UF72 201 aa6.48□□□□□ -1.37
VPS52-216ENST00000471309 TMEM223A0PJW6 202 aa6.47□□□□□ -1.37
VPS52-216ENST00000471309 HERVK_113P63121 156 aa6.47□□□□□ -1.37
VPS52-216ENST00000471309 MPV17L2Q567V2 206 aa6.47□□□□□ -1.37
VPS52-216ENST00000471309 LINC00242Q5T6M2 205 aa6.47□□□□□ -1.37
VPS52-216ENST00000471309 PCP2Q8IVA1 136 aa6.47□□□□□ -1.37
VPS52-216ENST00000471309 MRPS16Q9Y3D3 137 aaKnown RBP6.47□□□□□ -1.37
VPS52-216ENST00000471309 TGP01266 2768 aa6.47□□□□□ -1.37
VPS52-216ENST00000471309 MEGF8Q7Z7M0 2845 aa6.47□□□□□ -1.37
VPS52-216ENST00000471309 IGLV4-60A0A075B6I1 120 aa6.46□□□□□ -1.38
VPS52-216ENST00000471309 RBX1P62877 108 aa6.46□□□□□ -1.38
VPS52-216ENST00000471309 LYPD5Q6UWN5 251 aa6.46□□□□□ -1.38
VPS52-216ENST00000471309 NBEAL2Q6ZNJ1 2754 aa6.46□□□□□ -1.38
VPS52-216ENST00000471309 C2orf91Q6ZV80 131 aa6.46□□□□□ -1.38
VPS52-216ENST00000471309 GEMIN7Q9H840 131 aaKnown RBP6.46□□□□□ -1.38
VPS52-216ENST00000471309 MGAM2Q2M2H8 2515 aa6.46□□□□□ -1.38
VPS52-216ENST00000471309 NOTCH1P46531 2555 aa6.46□□□□□ -1.38
VPS52-216ENST00000471309 TRAV13-1A0A0B4J241 112 aa6.45□□□□□ -1.38
VPS52-216ENST00000471309 TRAV8-6A0A0B4J262 113 aa6.45□□□□□ -1.38
VPS52-216ENST00000471309 TMEM262E9PQX1 116 aa6.45□□□□□ -1.38
VPS52-216ENST00000471309 H3BRM9 83 aa6.45□□□□□ -1.38
VPS52-216ENST00000471309 SIVA1O15304 175 aa6.45□□□□□ -1.38
VPS52-216ENST00000471309 NHLRC4P0CG21 123 aaPredicted RBP6.45□□□□□ -1.38
VPS52-216ENST00000471309 LINC00469Q8N7U9 141 aa6.45□□□□□ -1.38
VPS52-216ENST00000471309 C15orf53Q8NAA6 179 aa6.45□□□□□ -1.38
VPS52-216ENST00000471309 TTTY13Q9BZ97 58 aa6.45□□□□□ -1.38
VPS52-216ENST00000471309 LEPROTO15243 131 aa6.44□□□□□ -1.38
VPS52-216ENST00000471309 CTAG1AP78358 180 aa6.44□□□□□ -1.38
VPS52-216ENST00000471309 PLEKHB2Q96CS7 222 aa6.44□□□□□ -1.38
VPS52-216ENST00000471309 HIGD1BQ9P298 99 aa6.44□□□□□ -1.38
VPS52-216ENST00000471309 CDKN2A-AS1Q9UH64 79 aa6.44□□□□□ -1.38
VPS52-216ENST00000471309 IGHV1-58A0A0C4DH39 117 aa6.43□□□□□ -1.38
VPS52-216ENST00000471309 MYMXA0A1B0GTQ4 84 aa6.43□□□□□ -1.38
VPS52-216ENST00000471309 J3QQQ9 107 aa6.43□□□□□ -1.38
VPS52-216ENST00000471309 CCL25O15444 150 aa6.43□□□□□ -1.38
VPS52-216ENST00000471309 TSPEAR-AS2P59090 65 aa6.43□□□□□ -1.38
VPS52-216ENST00000471309 MAPKAPK5-AS1Q8N8E1 139 aa6.43□□□□□ -1.38
VPS52-216ENST00000471309 TENM3Q9P273 2699 aa6.43□□□□□ -1.38
VPS52-216ENST00000471309 HUWE1Q7Z6Z7 4374 aaKnown RBP6.42□□□□□ -1.38
VPS52-216ENST00000471309 LINC00959A0A1B0GUT2 108 aa6.42□□□□□ -1.38
VPS52-216ENST00000471309 ZNF815PA8K554 130 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms