RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 I3L3M4 83 aa11.39□□□□□ -0.59
NCKIPSD-209ENST00000470006 COX7A2LO14548 114 aa11.39□□□□□ -0.59
NCKIPSD-209ENST00000470006 MBD3L1Q8WWY6 194 aa11.39□□□□□ -0.59
NCKIPSD-209ENST00000470006 BCL2L11O43521 198 aa11.38□□□□□ -0.59
NCKIPSD-209ENST00000470006 TSPAN13O95857 204 aa11.38□□□□□ -0.59
NCKIPSD-209ENST00000470006 SMIM15Q7Z3B0 74 aa11.38□□□□□ -0.59
NCKIPSD-209ENST00000470006 CYTL1Q9NRR1 136 aa11.38□□□□□ -0.59
NCKIPSD-209ENST00000470006 GNG4P50150 75 aa11.37□□□□□ -0.59
NCKIPSD-209ENST00000470006 C9orf62Q8N4C0 152 aa11.37□□□□□ -0.59
NCKIPSD-209ENST00000470006 MRAP2Q96G30 205 aa11.37□□□□□ -0.59
NCKIPSD-209ENST00000470006 RAB19A4D1S5 217 aa11.36□□□□□ -0.59
NCKIPSD-209ENST00000470006 ARPC5O15511 151 aa11.36□□□□□ -0.59
NCKIPSD-209ENST00000470006 KRTAP1-4P0C5Y4 121 aa11.36□□□□□ -0.59
NCKIPSD-209ENST00000470006 C2orf48Q96LS8 159 aa11.36□□□□□ -0.59
NCKIPSD-209ENST00000470006 CDC42SE2Q9NRR3 84 aa11.36□□□□□ -0.59
NCKIPSD-209ENST00000470006 H2AFB1P0C5Y9 115 aa11.35□□□□□ -0.59
NCKIPSD-209ENST00000470006 CTRLP40313 264 aa11.35□□□□□ -0.59
NCKIPSD-209ENST00000470006 TEX261Q6UWH6 196 aa11.35□□□□□ -0.59
NCKIPSD-209ENST00000470006 C1orf196B1AJZ1 125 aa11.34□□□□□ -0.59
NCKIPSD-209ENST00000470006 UMAD1C9J7I0 102 aa11.34□□□□□ -0.59
NCKIPSD-209ENST00000470006 FAM19A5Q7Z5A7 132 aaPredicted RBP11.34□□□□□ -0.59
NCKIPSD-209ENST00000470006 KRTAP11-1Q8IUC1 163 aa11.34□□□□□ -0.59
NCKIPSD-209ENST00000470006 TMEM242Q9NWH2 141 aa11.34□□□□□ -0.59
NCKIPSD-209ENST00000470006 GNG13Q9P2W3 67 aa11.34□□□□□ -0.59
NCKIPSD-209ENST00000470006 FAM168BA1KXE4 195 aa11.33□□□□□ -0.6
NCKIPSD-209ENST00000470006 FOXA3P55318 350 aaPredicted RBP11.33□□□□□ -0.6
NCKIPSD-209ENST00000470006 UBE2BP63146 152 aa11.33□□□□□ -0.6
NCKIPSD-209ENST00000470006 C5orf38Q86SI9 138 aa11.33□□□□□ -0.6
NCKIPSD-209ENST00000470006 C11orf52Q96A22 123 aa11.33□□□□□ -0.6
NCKIPSD-209ENST00000470006 BIN3Q9NQY0 253 aa11.33□□□□□ -0.6
NCKIPSD-209ENST00000470006 ESDP10768 282 aa11.32□□□□□ -0.6
NCKIPSD-209ENST00000470006 SPAG11BQ08648 103 aa11.32□□□□□ -0.6
NCKIPSD-209ENST00000470006 MANBALQ9NQG1 85 aa11.32□□□□□ -0.6
NCKIPSD-209ENST00000470006 TSHBP01222 138 aa11.31□□□□□ -0.6
NCKIPSD-209ENST00000470006 CCL20P78556 96 aa11.31□□□□□ -0.6
NCKIPSD-209ENST00000470006 SMIM12Q96EX1 92 aa11.31□□□□□ -0.6
NCKIPSD-209ENST00000470006 CNFNQ9BYD5 112 aa11.31□□□□□ -0.6
NCKIPSD-209ENST00000470006 ST20Q9HBF5 79 aa11.31□□□□□ -0.6
NCKIPSD-209ENST00000470006 TRAV13-1A0A0B4J241 112 aa11.3□□□□□ -0.6
NCKIPSD-209ENST00000470006 RNF151Q2KHN1 245 aa11.3□□□□□ -0.6
NCKIPSD-209ENST00000470006 MRPL52Q86TS9 123 aaKnown RBP11.3□□□□□ -0.6
NCKIPSD-209ENST00000470006 NUDT10Q8NFP7 164 aa11.3□□□□□ -0.6
NCKIPSD-209ENST00000470006 NUDT11Q96G61 164 aa11.3□□□□□ -0.6
NCKIPSD-209ENST00000470006 IMMP2LQ96T52 175 aa11.3□□□□□ -0.6
NCKIPSD-209ENST00000470006 RNASE13Q5GAN3 156 aaKnown RBP11.29□□□□□ -0.6
NCKIPSD-209ENST00000470006 CARHSP1Q9Y2V2 147 aaKnown RBP11.29□□□□□ -0.6
NCKIPSD-209ENST00000470006 C7orf77A4D0Y5 90 aa11.28□□□□□ -0.6
NCKIPSD-209ENST00000470006 G3V3Q6 166 aa11.28□□□□□ -0.6
NCKIPSD-209ENST00000470006 GAGE2EQ4V326 116 aa11.28□□□□□ -0.6
NCKIPSD-209ENST00000470006 GAGE2DQ9UEU5 116 aa11.28□□□□□ -0.6
NCKIPSD-209ENST00000470006 RPP21Q9H633 154 aaKnown RBP11.27□□□□□ -0.61
NCKIPSD-209ENST00000470006 MED9Q9NWA0 146 aa11.27□□□□□ -0.61
NCKIPSD-209ENST00000470006 TRBV6-5A0A0K0K1A5 114 aa11.26□□□□□ -0.61
NCKIPSD-209ENST00000470006 RNASE7Q9H1E1 156 aaKnown RBP11.26□□□□□ -0.61
NCKIPSD-209ENST00000470006 M0QXV9 152 aa11.25□□□□□ -0.61
NCKIPSD-209ENST00000470006 ORAOV1Q8WV07 137 aa11.25□□□□□ -0.61
NCKIPSD-209ENST00000470006 MRPL35Q9NZE8 188 aaKnown RBP11.25□□□□□ -0.61
NCKIPSD-209ENST00000470006 NDUFA1O15239 70 aa11.24□□□□□ -0.61
NCKIPSD-209ENST00000470006 FCER1GP30273 86 aa11.24□□□□□ -0.61
NCKIPSD-209ENST00000470006 SMAGPQ0VAQ4 97 aa11.24□□□□□ -0.61
NCKIPSD-209ENST00000470006 OR10D4PQ8NGN7 298 aa11.24□□□□□ -0.61
NCKIPSD-209ENST00000470006 FAM210AQ96ND0 272 aa11.24□□□□□ -0.61
NCKIPSD-209ENST00000470006 TRBV20OR9-2A0A075B6H5 130 aa11.23□□□□□ -0.61
NCKIPSD-209ENST00000470006 PDE6DO43924 150 aa11.23□□□□□ -0.61
NCKIPSD-209ENST00000470006 SMLR1H3BR10 107 aa11.21□□□□□ -0.61
NCKIPSD-209ENST00000470006 TMEM241Q24JQ0 296 aa11.21□□□□□ -0.61
NCKIPSD-209ENST00000470006 C10orf25Q5T742 122 aa11.21□□□□□ -0.61
NCKIPSD-209ENST00000470006 CDIP1Q9H305 208 aa11.21□□□□□ -0.61
NCKIPSD-209ENST00000470006 F8WDY8 70 aa11.2□□□□□ -0.62
NCKIPSD-209ENST00000470006 TEX46H3BTG2 121 aa11.2□□□□□ -0.62
NCKIPSD-209ENST00000470006 POLR2KP53803 58 aaKnown RBP11.2□□□□□ -0.62
NCKIPSD-209ENST00000470006 UNQ6190/PRO20217Q6UXQ8 127 aa11.2□□□□□ -0.62
NCKIPSD-209ENST00000470006 UBE2D4Q9Y2X8 147 aa11.2□□□□□ -0.62
NCKIPSD-209ENST00000470006 TRBV27A0A0K0K1C4 114 aa11.19□□□□□ -0.62
NCKIPSD-209ENST00000470006 KANTRA0A1W2PQU2 76 aa11.19□□□□□ -0.62
NCKIPSD-209ENST00000470006 ZNF861PO60384 105 aa11.19□□□□□ -0.62
NCKIPSD-209ENST00000470006 TLX1NBP0CAT3 122 aa11.19□□□□□ -0.62
NCKIPSD-209ENST00000470006 BORCS7Q96B45 105 aa11.19□□□□□ -0.62
NCKIPSD-209ENST00000470006 CSDC2Q9Y534 153 aaKnown RBP11.19□□□□□ -0.62
NCKIPSD-209ENST00000470006 Q6ZUT4 128 aa11.18□□□□□ -0.62
NCKIPSD-209ENST00000470006 TYMSOSQ8TAI1 123 aa11.18□□□□□ -0.62
NCKIPSD-209ENST00000470006 SMDT1Q9H4I9 107 aa11.18□□□□□ -0.62
NCKIPSD-209ENST00000470006 C6orf48Q9UBA6 75 aa11.18□□□□□ -0.62
NCKIPSD-209ENST00000470006 VCYO14598 125 aa11.17□□□□□ -0.62
NCKIPSD-209ENST00000470006 ZNF345Q14585 488 aa11.17□□□□□ -0.62
NCKIPSD-209ENST00000470006 KRTAP7-1Q8IUC3 87 aa11.17□□□□□ -0.62
NCKIPSD-209ENST00000470006 RETNLBQ9BQ08 111 aa11.17□□□□□ -0.62
NCKIPSD-209ENST00000470006 K7EN84 100 aa11.16□□□□□ -0.62
NCKIPSD-209ENST00000470006 GATCO43716 136 aaKnown RBP11.16□□□□□ -0.62
NCKIPSD-209ENST00000470006 OCC1Q8TAD7 63 aa11.16□□□□□ -0.62
NCKIPSD-209ENST00000470006 A0A087X002 238 aa11.14□□□□□ -0.63
NCKIPSD-209ENST00000470006 A8MWL6 223 aa11.14□□□□□ -0.63
NCKIPSD-209ENST00000470006 CRYGAP11844 174 aa11.14□□□□□ -0.63
NCKIPSD-209ENST00000470006 TMEM18Q96B42 140 aa11.14□□□□□ -0.63
NCKIPSD-209ENST00000470006 KIR2DL4Q99706 377 aa11.14□□□□□ -0.63
NCKIPSD-209ENST00000470006 SMKR1H3BMG3 65 aa11.13□□□□□ -0.63
NCKIPSD-209ENST00000470006 RAB4AP20338 218 aa11.12□□□□□ -0.63
NCKIPSD-209ENST00000470006 TMEM191AQ9H0A3 160 aa11.12□□□□□ -0.63
NCKIPSD-209ENST00000470006 MUC17Q685J3 4493 aa11.11□□□□□ -0.63
NCKIPSD-209ENST00000470006 AMN1Q8IY45 258 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms