RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 M0R2N4 97 aa12.3□□□□□ -0.44
MRPL28-208ENST00000469744 NPSP0C0P6 89 aa12.3□□□□□ -0.44
MRPL28-208ENST00000469744 HSD52Q0P140 79 aa12.3□□□□□ -0.44
MRPL28-208ENST00000469744 TMEM97Q5BJF2 176 aa12.3□□□□□ -0.44
MRPL28-208ENST00000469744 UBE2DNLQ8IWF7 75 aa12.3□□□□□ -0.44
MRPL28-208ENST00000469744 DAZ2Q13117 558 aaKnown RBP12.29□□□□□ -0.44
MRPL28-208ENST00000469744 PCP2Q8IVA1 136 aa12.29□□□□□ -0.44
MRPL28-208ENST00000469744 MRPL16Q9NX20 251 aaKnown RBP12.29□□□□□ -0.44
MRPL28-208ENST00000469744 IGKV2D-26A0A0A0MRZ7 120 aa12.28□□□□□ -0.44
MRPL28-208ENST00000469744 F5H768 121 aa12.28□□□□□ -0.44
MRPL28-208ENST00000469744 CIDEAO60543 219 aa12.28□□□□□ -0.44
MRPL28-208ENST00000469744 SEC11AP67812 179 aa12.28□□□□□ -0.44
MRPL28-208ENST00000469744 CST9LQ9H4G1 147 aa12.28□□□□□ -0.44
MRPL28-208ENST00000469744 PYGO1Q9Y3Y4 419 aa12.28□□□□□ -0.44
MRPL28-208ENST00000469744 CRYBA4P53673 196 aa12.27□□□□□ -0.44
MRPL28-208ENST00000469744 RPL39P62891 51 aaKnown RBP12.27□□□□□ -0.44
MRPL28-208ENST00000469744 IGHV3-73A0A0B4J1V6 119 aa12.27□□□□□ -0.45
MRPL28-208ENST00000469744 ATP5G1P05496 136 aa12.27□□□□□ -0.45
MRPL28-208ENST00000469744 GAGE1Q13065 139 aa12.27□□□□□ -0.45
MRPL28-208ENST00000469744 ORAOV1Q8WV07 137 aa12.27□□□□□ -0.45
MRPL28-208ENST00000469744 TRAV4A0A0B4J268 109 aa12.26□□□□□ -0.45
MRPL28-208ENST00000469744 E9PLD3 99 aa12.26□□□□□ -0.45
MRPL28-208ENST00000469744 Q6ZSN1 163 aa12.26□□□□□ -0.45
MRPL28-208ENST00000469744 LINC00469Q8N7U9 141 aa12.26□□□□□ -0.45
MRPL28-208ENST00000469744 OR4C5Q8NGB2 326 aa12.26□□□□□ -0.45
MRPL28-208ENST00000469744 IGLV4-69A0A075B6H9 119 aa12.25□□□□□ -0.45
MRPL28-208ENST00000469744 TRBV10-1A0A0K0K1A3 114 aa12.25□□□□□ -0.45
MRPL28-208ENST00000469744 TRGV1A0A0A0MS02 117 aa12.24□□□□□ -0.45
MRPL28-208ENST00000469744 GAGE12BA1L429 117 aa12.24□□□□□ -0.45
MRPL28-208ENST00000469744 GAGE7O76087 117 aa12.24□□□□□ -0.45
MRPL28-208ENST00000469744 GAGE12FP0CL80 117 aa12.24□□□□□ -0.45
MRPL28-208ENST00000469744 GAGE12GP0CL81 117 aa12.24□□□□□ -0.45
MRPL28-208ENST00000469744 GAGE12IP0CL82 117 aa12.24□□□□□ -0.45
MRPL28-208ENST00000469744 ZNF25P17030 456 aaPredicted RBP12.24□□□□□ -0.45
MRPL28-208ENST00000469744 NFE4Q86UQ8 179 aa12.24□□□□□ -0.45
MRPL28-208ENST00000469744 C15orf53Q8NAA6 179 aa12.24□□□□□ -0.45
MRPL28-208ENST00000469744 COX11Q9Y6N1 276 aa12.24□□□□□ -0.45
MRPL28-208ENST00000469744 HERVK_113P61574 105 aa12.23□□□□□ -0.45
MRPL28-208ENST00000469744 TAL2Q16559 108 aa12.23□□□□□ -0.45
MRPL28-208ENST00000469744 HECTD4Q9Y4D8 3996 aa12.23□□□□□ -0.45
MRPL28-208ENST00000469744 C11orf86A6NJI1 115 aa12.22□□□□□ -0.45
MRPL28-208ENST00000469744 DNAH2Q9P225 4427 aa12.22□□□□□ -0.45
MRPL28-208ENST00000469744 IGLV4-3A0A075B6K6 122 aa12.21□□□□□ -0.45
MRPL28-208ENST00000469744 TRBV25-1A0A075B6N4 114 aa12.21□□□□□ -0.45
MRPL28-208ENST00000469744 A6NDN8 102 aa12.21□□□□□ -0.45
MRPL28-208ENST00000469744 Q6ZTI0 123 aa12.21□□□□□ -0.45
MRPL28-208ENST00000469744 LINC00612Q8N6U2 182 aa12.21□□□□□ -0.45
MRPL28-208ENST00000469744 SPANXA1Q9NS26 97 aa12.21□□□□□ -0.45
MRPL28-208ENST00000469744 TAX1BP3O14907 124 aa12.21□□□□□ -0.46
MRPL28-208ENST00000469744 CHCHD7Q9BUK0 85 aa12.21□□□□□ -0.46
MRPL28-208ENST00000469744 CHAC1Q9BUX1 264 aa12.21□□□□□ -0.46
MRPL28-208ENST00000469744 MYMXA0A1B0GTQ4 84 aa12.2□□□□□ -0.46
MRPL28-208ENST00000469744 RTL8CO15255 209 aa12.2□□□□□ -0.46
MRPL28-208ENST00000469744 COTL1Q14019 142 aa12.2□□□□□ -0.46
MRPL28-208ENST00000469744 MAPKAPK5-AS1Q8N8E1 139 aa12.2□□□□□ -0.46
MRPL28-208ENST00000469744 AMELXQ99217 191 aa12.2□□□□□ -0.46
MRPL28-208ENST00000469744 VCX2Q9H322 139 aa12.2□□□□□ -0.46
MRPL28-208ENST00000469744 TRBV7-3A0A075B6L6 115 aa12.19□□□□□ -0.46
MRPL28-208ENST00000469744 TRAV26-1A0A087WT03 109 aa12.19□□□□□ -0.46
MRPL28-208ENST00000469744 TRAV8-6A0A0B4J262 113 aa12.19□□□□□ -0.46
MRPL28-208ENST00000469744 A0A0J9YY99 117 aa12.19□□□□□ -0.46
MRPL28-208ENST00000469744 K7EQD1 137 aa12.19□□□□□ -0.46
MRPL28-208ENST00000469744 PRADC1Q9BSG0 188 aa12.19□□□□□ -0.46
MRPL28-208ENST00000469744 TIMM21Q9BVV7 248 aa12.19□□□□□ -0.46
MRPL28-208ENST00000469744 RPL36AP83881 106 aaKnown RBP12.18□□□□□ -0.46
MRPL28-208ENST00000469744 Q6ZR54 194 aa12.18□□□□□ -0.46
MRPL28-208ENST00000469744 DEFB104AQ8WTQ1 72 aa12.18□□□□□ -0.46
MRPL28-208ENST00000469744 RPL36ALQ969Q0 106 aaKnown RBP12.18□□□□□ -0.46
MRPL28-208ENST00000469744 ZNF479Q96JC4 524 aa12.18□□□□□ -0.46
MRPL28-208ENST00000469744 FAT2Q9NYQ8 4349 aa12.18□□□□□ -0.46
MRPL28-208ENST00000469744 H3BRM9 83 aa12.17□□□□□ -0.46
MRPL28-208ENST00000469744 LINC00336Q6ZUF6 198 aa12.17□□□□□ -0.46
MRPL28-208ENST00000469744 DAZ4Q86SG3 579 aaKnown RBP12.17□□□□□ -0.46
MRPL28-208ENST00000469744 TM2D2Q9BX73 214 aa12.17□□□□□ -0.46
MRPL28-208ENST00000469744 TTTY13Q9BZ97 58 aa12.17□□□□□ -0.46
MRPL28-208ENST00000469744 DAZ3Q9NR90 486 aaKnown RBP12.17□□□□□ -0.46
MRPL28-208ENST00000469744 ZNRF2Q8NHG8 242 aa12.16□□□□□ -0.46
MRPL28-208ENST00000469744 Q9UF83 564 aa12.16□□□□□ -0.46
MRPL28-208ENST00000469744 UBE2D4Q9Y2X8 147 aa12.16□□□□□ -0.46
MRPL28-208ENST00000469744 TRGV2A0A075B6R0 118 aa12.15□□□□□ -0.46
MRPL28-208ENST00000469744 MRPS36P82909 103 aaKnown RBP12.15□□□□□ -0.46
MRPL28-208ENST00000469744 LINC00588Q9Y4M8 146 aa12.15□□□□□ -0.46
MRPL28-208ENST00000469744 DNAH17Q9UFH2 4485 aa12.15□□□□□ -0.46
MRPL28-208ENST00000469744 TRBV6-4A0A1B0GX49 114 aa12.14□□□□□ -0.47
MRPL28-208ENST00000469744 CCL18P55774 89 aa12.14□□□□□ -0.47
MRPL28-208ENST00000469744 SMAGPQ0VAQ4 97 aa12.14□□□□□ -0.47
MRPL28-208ENST00000469744 CEND1Q8N111 149 aa12.14□□□□□ -0.47
MRPL28-208ENST00000469744 FAM104AQ969W3 186 aa12.14□□□□□ -0.47
MRPL28-208ENST00000469744 OPRPNQ99935 248 aaPredicted RBP12.14□□□□□ -0.47
MRPL28-208ENST00000469744 A0A1B0GVY2 172 aa12.14□□□□□ -0.47
MRPL28-208ENST00000469744 UBE2D3P61077 147 aa12.14□□□□□ -0.47
MRPL28-208ENST00000469744 UBE2D2P62837 147 aa12.14□□□□□ -0.47
MRPL28-208ENST00000469744 TMEM170BQ5T4T1 132 aa12.14□□□□□ -0.47
MRPL28-208ENST00000469744 TMEM223A0PJW6 202 aa12.13□□□□□ -0.47
MRPL28-208ENST00000469744 SLC25A29Q8N8R3 303 aa12.13□□□□□ -0.47
MRPL28-208ENST00000469744 ZNF815PA8K554 130 aa12.12□□□□□ -0.47
MRPL28-208ENST00000469744 LEPROTO15243 131 aa12.12□□□□□ -0.47
MRPL28-208ENST00000469744 ZNF22P17026 224 aaPredicted RBP12.12□□□□□ -0.47
MRPL28-208ENST00000469744 GTSF1LQ9H1H1 148 aa12.12□□□□□ -0.47
MRPL28-208ENST00000469744 CSDC2Q9Y534 153 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms