RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 SAMD10Q9BYL1 202 aa4.22□□□□□ -1.73
PTCD3-208ENST00000469585 ST20Q9HBF5 79 aa4.22□□□□□ -1.73
PTCD3-208ENST00000469585 TENM2Q9NT68 2774 aa4.22□□□□□ -1.73
PTCD3-208ENST00000469585 TRBV6-8A0A0A6YYG3 113 aa4.21□□□□□ -1.74
PTCD3-208ENST00000469585 RPL37AP8A6NKH3 93 aa4.21□□□□□ -1.74
PTCD3-208ENST00000469585 IGHV3-30P01768 117 aa4.21□□□□□ -1.74
PTCD3-208ENST00000469585 IGHV3-33P01772 117 aa4.21□□□□□ -1.74
PTCD3-208ENST00000469585 ANGP03950 147 aaKnown RBP4.21□□□□□ -1.74
PTCD3-208ENST00000469585 DNAH10OSP0CZ25 163 aa4.21□□□□□ -1.74
PTCD3-208ENST00000469585 IGHV3-30-3P0DP02 117 aa4.21□□□□□ -1.74
PTCD3-208ENST00000469585 IGHV3-30-5P0DP03 117 aa4.21□□□□□ -1.74
PTCD3-208ENST00000469585 UBE2D3P61077 147 aa4.21□□□□□ -1.74
PTCD3-208ENST00000469585 UBE2D2P62837 147 aa4.21□□□□□ -1.74
PTCD3-208ENST00000469585 LAGE3Q14657 143 aa4.21□□□□□ -1.74
PTCD3-208ENST00000469585 ATP5L2Q7Z4Y8 100 aa4.21□□□□□ -1.74
PTCD3-208ENST00000469585 COMMD7Q86VX2 200 aa4.21□□□□□ -1.74
PTCD3-208ENST00000469585 TMEM101Q96IK0 257 aa4.21□□□□□ -1.74
PTCD3-208ENST00000469585 KIR2DL4Q99706 377 aa4.21□□□□□ -1.74
PTCD3-208ENST00000469585 TMEM243Q9BU79 118 aa4.21□□□□□ -1.74
PTCD3-208ENST00000469585 CNFNQ9BYD5 112 aa4.21□□□□□ -1.74
PTCD3-208ENST00000469585 TMEM191AQ9H0A3 160 aa4.21□□□□□ -1.74
PTCD3-208ENST00000469585 NCR2O95944 276 aa4.2□□□□□ -1.74
PTCD3-208ENST00000469585 APCSP02743 223 aa4.2□□□□□ -1.74
PTCD3-208ENST00000469585 PPBPP02775 128 aa4.2□□□□□ -1.74
PTCD3-208ENST00000469585 CKS2P33552 79 aa4.2□□□□□ -1.74
PTCD3-208ENST00000469585 FOXA3P55318 350 aaPredicted RBP4.2□□□□□ -1.74
PTCD3-208ENST00000469585 KRTAP10-12P60413 245 aa4.2□□□□□ -1.74
PTCD3-208ENST00000469585 UFSP1Q6NVU6 142 aa4.2□□□□□ -1.74
PTCD3-208ENST00000469585 WFDC10BQ8IUB3 73 aa4.2□□□□□ -1.74
PTCD3-208ENST00000469585 Q9HAA7 133 aa4.2□□□□□ -1.74
PTCD3-208ENST00000469585 SMIM27A0A1W2PRY6 76 aa4.19□□□□□ -1.74
PTCD3-208ENST00000469585 LINC00862A6NCI5 91 aa4.19□□□□□ -1.74
PTCD3-208ENST00000469585 I3L3M4 83 aa4.19□□□□□ -1.74
PTCD3-208ENST00000469585 M0QY20 66 aa4.19□□□□□ -1.74
PTCD3-208ENST00000469585 RAB5AP20339 215 aa4.19□□□□□ -1.74
PTCD3-208ENST00000469585 G0S2P27469 103 aa4.19□□□□□ -1.74
PTCD3-208ENST00000469585 LINC00315P59091 139 aa4.19□□□□□ -1.74
PTCD3-208ENST00000469585 COX19Q49B96 90 aa4.19□□□□□ -1.74
PTCD3-208ENST00000469585 MRPL54Q6P161 138 aaKnown RBP4.19□□□□□ -1.74
PTCD3-208ENST00000469585 Q6ZR54 194 aa4.19□□□□□ -1.74
PTCD3-208ENST00000469585 NUP35Q8NFH5 326 aa4.19□□□□□ -1.74
PTCD3-208ENST00000469585 GTSF1Q8WW33 167 aa4.19□□□□□ -1.74
PTCD3-208ENST00000469585 SEC11CQ9BY50 192 aa4.19□□□□□ -1.74
PTCD3-208ENST00000469585 V9GYV3 84 aa4.19□□□□□ -1.74
PTCD3-208ENST00000469585 IGKV2D-24A0A075B6R9 120 aa4.18□□□□□ -1.74
PTCD3-208ENST00000469585 TRAV9-1A0A075B6T8 112 aa4.18□□□□□ -1.74
PTCD3-208ENST00000469585 TMEM218A2RU14 115 aa4.18□□□□□ -1.74
PTCD3-208ENST00000469585 SDHAF1A6NFY7 115 aa4.18□□□□□ -1.74
PTCD3-208ENST00000469585 IBA57-AS1B1ANH7 110 aa4.18□□□□□ -1.74
PTCD3-208ENST00000469585 ATP6V1G1O75348 118 aa4.18□□□□□ -1.74
PTCD3-208ENST00000469585 SNAPINO95295 136 aa4.18□□□□□ -1.74
PTCD3-208ENST00000469585 DSCR10P59022 87 aa4.18□□□□□ -1.74
PTCD3-208ENST00000469585 KRTAP10-7P60409 375 aaPredicted RBP4.18□□□□□ -1.74
PTCD3-208ENST00000469585 RHEBQ15382 184 aa4.18□□□□□ -1.74
PTCD3-208ENST00000469585 RNASEKQ6P5S7 137 aaKnown RBP4.18□□□□□ -1.74
PTCD3-208ENST00000469585 SVBPQ8N300 66 aa4.18□□□□□ -1.74
PTCD3-208ENST00000469585 UBE2WQ96B02 151 aa4.18□□□□□ -1.74
PTCD3-208ENST00000469585 IMMP2LQ96T52 175 aa4.18□□□□□ -1.74
PTCD3-208ENST00000469585 KLK12Q9UKR0 248 aa4.18□□□□□ -1.74
PTCD3-208ENST00000469585 TRAV26-2A0A0B4J265 109 aa4.17□□□□□ -1.74
PTCD3-208ENST00000469585 ZNF25P17030 456 aaPredicted RBP4.17□□□□□ -1.74
PTCD3-208ENST00000469585 MIAQ16674 131 aa4.17□□□□□ -1.74
PTCD3-208ENST00000469585 IQCJQ1A5X6 159 aa4.17□□□□□ -1.74
PTCD3-208ENST00000469585 NIT1Q86X76 327 aa4.17□□□□□ -1.74
PTCD3-208ENST00000469585 AMN1Q8IY45 258 aa4.17□□□□□ -1.74
PTCD3-208ENST00000469585 ORMDL3Q8N138 153 aa4.17□□□□□ -1.74
PTCD3-208ENST00000469585 GATD1Q8NB37 220 aa4.17□□□□□ -1.74
PTCD3-208ENST00000469585 RPS10P5Q9NQ39 176 aa4.17□□□□□ -1.74
PTCD3-208ENST00000469585 LAMTOR2Q9Y2Q5 125 aa4.17□□□□□ -1.74
PTCD3-208ENST00000469585 KIF25-AS1Q9Y6Z4 181 aa4.17□□□□□ -1.74
PTCD3-208ENST00000469585 DNAH9Q9NYC9 4486 aa4.16□□□□□ -1.74
PTCD3-208ENST00000469585 TRAV8-4A0A0B4J246 113 aa4.16□□□□□ -1.74
PTCD3-208ENST00000469585 C7orf77A4D0Y5 90 aa4.16□□□□□ -1.74
PTCD3-208ENST00000469585 C16orf90A8MZG2 172 aa4.16□□□□□ -1.74
PTCD3-208ENST00000469585 C9JQL5 133 aa4.16□□□□□ -1.74
PTCD3-208ENST00000469585 PHOX2AO14813 284 aa4.16□□□□□ -1.74
PTCD3-208ENST00000469585 LINC00694P0DN24 101 aa4.16□□□□□ -1.74
PTCD3-208ENST00000469585 RAB4AP20338 218 aa4.16□□□□□ -1.74
PTCD3-208ENST00000469585 FAM104BQ5XKR9 115 aa4.16□□□□□ -1.74
PTCD3-208ENST00000469585 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.16□□□□□ -1.74
PTCD3-208ENST00000469585 REG3GQ6UW15 175 aa4.16□□□□□ -1.74
PTCD3-208ENST00000469585 Q8N976 141 aa4.16□□□□□ -1.74
PTCD3-208ENST00000469585 OR5A1Q8NGJ0 315 aa4.16□□□□□ -1.74
PTCD3-208ENST00000469585 C20orf78Q9BR46 151 aa4.16□□□□□ -1.74
PTCD3-208ENST00000469585 MAP1LC3AQ9H492 121 aa4.16□□□□□ -1.74
PTCD3-208ENST00000469585 HUWE1Q7Z6Z7 4374 aaKnown RBP4.15□□□□□ -1.74
PTCD3-208ENST00000469585 TRBV6-5A0A0K0K1A5 114 aa4.15□□□□□ -1.75
PTCD3-208ENST00000469585 HLA-DQA1P01909 254 aa4.15□□□□□ -1.75
PTCD3-208ENST00000469585 APOC3P02656 99 aa4.15□□□□□ -1.75
PTCD3-208ENST00000469585 MT-ND6P03923 174 aa4.15□□□□□ -1.75
PTCD3-208ENST00000469585 SS18Q15532 418 aa4.15□□□□□ -1.75
PTCD3-208ENST00000469585 Q6ZN92 141 aa4.15□□□□□ -1.75
PTCD3-208ENST00000469585 TMEM136Q6ZRR5 245 aa4.15□□□□□ -1.75
PTCD3-208ENST00000469585 LINC00518Q8N0U6 118 aa4.15□□□□□ -1.75
PTCD3-208ENST00000469585 RPL39LQ96EH5 51 aaKnown RBP4.15□□□□□ -1.75
PTCD3-208ENST00000469585 PRELID3AQ96N28 172 aa4.15□□□□□ -1.75
PTCD3-208ENST00000469585 TMEM242Q9NWH2 141 aa4.15□□□□□ -1.75
PTCD3-208ENST00000469585 PKIGQ9Y2B9 76 aa4.15□□□□□ -1.75
PTCD3-208ENST00000469585 IGKV3OR2-268A0A0C4DH90 116 aa4.14□□□□□ -1.75
PTCD3-208ENST00000469585 LINC01549A6NIU2 74 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms