RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 ORMDL1Q9P0S3 153 aa3.54□□□□□ -1.84
SF3B1-207ENST00000468925 NBEAQ8NFP9 2946 aa3.54□□□□□ -1.84
SF3B1-207ENST00000468925 CEP295Q9C0D2 2601 aa3.54□□□□□ -1.84
SF3B1-207ENST00000468925 PRRC2AP48634 2157 aaKnown RBP3.53□□□□□ -1.84
SF3B1-207ENST00000468925 EP300Q09472 2414 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-207ENST00000468925 NACAE9PAV3 2078 aa3.53□□□□□ -1.84
SF3B1-207ENST00000468925 IGHV3-21A0A0B4J1V1 117 aa3.53□□□□□ -1.84
SF3B1-207ENST00000468925 IGKV3D-7A0A0C4DH55 119 aa3.53□□□□□ -1.84
SF3B1-207ENST00000468925 A0A0J9YXV3 536 aa3.53□□□□□ -1.84
SF3B1-207ENST00000468925 PINLYPA6NC86 204 aa3.53□□□□□ -1.84
SF3B1-207ENST00000468925 F6UB75 175 aa3.53□□□□□ -1.84
SF3B1-207ENST00000468925 SPRY3O43610 288 aa3.53□□□□□ -1.84
SF3B1-207ENST00000468925 IGLV1-47P01700 117 aa3.53□□□□□ -1.84
SF3B1-207ENST00000468925 IGHV1-46P01743 117 aa3.53□□□□□ -1.84
SF3B1-207ENST00000468925 TFF1P04155 84 aa3.53□□□□□ -1.84
SF3B1-207ENST00000468925 CTSGP08311 255 aa3.53□□□□□ -1.84
SF3B1-207ENST00000468925 CD28P10747 220 aa3.53□□□□□ -1.84
SF3B1-207ENST00000468925 LINC00315P59091 139 aa3.53□□□□□ -1.84
SF3B1-207ENST00000468925 ESRGQ1W209 222 aa3.53□□□□□ -1.84
SF3B1-207ENST00000468925 RUSC1-AS1Q66K80 236 aa3.53□□□□□ -1.84
SF3B1-207ENST00000468925 SUMO4Q6EEV6 95 aa3.53□□□□□ -1.84
SF3B1-207ENST00000468925 FP248Q71RG6 208 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-207ENST00000468925 VMO1Q7Z5L0 202 aa3.53□□□□□ -1.84
SF3B1-207ENST00000468925 CYSTM1Q9H1C7 97 aa3.53□□□□□ -1.84
SF3B1-207ENST00000468925 ASCC3Q8N3C0 2202 aaKnown RBP3.53□□□□□ -1.84
SF3B1-207ENST00000468925 NAV3Q8IVL0 2385 aa3.52□□□□□ -1.85
SF3B1-207ENST00000468925 TRBV12-3P01733 135 aa3.52□□□□□ -1.85
SF3B1-207ENST00000468925 NBL1P41271 181 aa3.52□□□□□ -1.85
SF3B1-207ENST00000468925 RPL39P62891 51 aaKnown RBP3.52□□□□□ -1.85
SF3B1-207ENST00000468925 ADAMTSL4-AS1Q5T5F5 129 aa3.52□□□□□ -1.85
SF3B1-207ENST00000468925 SPINK14Q6IE38 97 aa3.52□□□□□ -1.85
SF3B1-207ENST00000468925 FAM223AQ8IWN6 122 aa3.52□□□□□ -1.85
SF3B1-207ENST00000468925 ZFAND2AQ8N6M9 145 aa3.52□□□□□ -1.85
SF3B1-207ENST00000468925 WFDC11Q8NEX6 87 aa3.52□□□□□ -1.85
SF3B1-207ENST00000468925 DSCAMO60469 2012 aa3.52□□□□□ -1.85
SF3B1-207ENST00000468925 ARFGEF3Q5TH69 2177 aa3.52□□□□□ -1.85
SF3B1-207ENST00000468925 TRAV12-3A0A0B4J271 114 aa3.51□□□□□ -1.85
SF3B1-207ENST00000468925 IGLV5-39A0A0G2JS06 123 aa3.51□□□□□ -1.85
SF3B1-207ENST00000468925 M0QY20 66 aa3.51□□□□□ -1.85
SF3B1-207ENST00000468925 NDUFS5O43920 106 aa3.51□□□□□ -1.85
SF3B1-207ENST00000468925 IGF1P05019 195 aa3.51□□□□□ -1.85
SF3B1-207ENST00000468925 MIFP14174 115 aa3.51□□□□□ -1.85
SF3B1-207ENST00000468925 Q0VFX4 171 aa3.51□□□□□ -1.85
SF3B1-207ENST00000468925 Q1T7F1 81 aa3.51□□□□□ -1.85
SF3B1-207ENST00000468925 MDS2Q8NDY4 140 aa3.51□□□□□ -1.85
SF3B1-207ENST00000468925 ITLN2Q8WWU7 325 aaPredicted RBP3.51□□□□□ -1.85
SF3B1-207ENST00000468925 LINC00476Q8WZB0 136 aa3.51□□□□□ -1.85
SF3B1-207ENST00000468925 Q96MF0 132 aa3.51□□□□□ -1.85
SF3B1-207ENST00000468925 LINC00167Q96N53 147 aa3.51□□□□□ -1.85
SF3B1-207ENST00000468925 DPM3Q9P2X0 92 aa3.51□□□□□ -1.85
SF3B1-207ENST00000468925 C22orf24Q9Y442 160 aa3.51□□□□□ -1.85
SF3B1-207ENST00000468925 TEP1Q99973 2627 aaKnown RBP3.51□□□□□ -1.85
SF3B1-207ENST00000468925 LOC400499M0QZD8 3231 aa3.51□□□□□ -1.85
SF3B1-207ENST00000468925 TECTAO75443 2155 aa3.51□□□□□ -1.85
SF3B1-207ENST00000468925 DOCK10Q96BY6 2186 aa3.51□□□□□ -1.85
SF3B1-207ENST00000468925 DSPP15924 2871 aaKnown RBP3.5□□□□□ -1.85
SF3B1-207ENST00000468925 ITPR1Q14643 2758 aa3.5□□□□□ -1.85
SF3B1-207ENST00000468925 LOC110117498A0A087WWA1 95 aa3.5□□□□□ -1.85
SF3B1-207ENST00000468925 CYSRT1A8MQ03 144 aa3.5□□□□□ -1.85
SF3B1-207ENST00000468925 PRAC2D3DTV9 90 aa3.5□□□□□ -1.85
SF3B1-207ENST00000468925 F8WEM9 126 aa3.5□□□□□ -1.85
SF3B1-207ENST00000468925 RNASE3P12724 160 aaKnown RBP3.5□□□□□ -1.85
SF3B1-207ENST00000468925 CCL3L1P16619 93 aa3.5□□□□□ -1.85
SF3B1-207ENST00000468925 DEFB108BQ8NET1 73 aa3.5□□□□□ -1.85
SF3B1-207ENST00000468925 HES7Q9BYE0 225 aa3.5□□□□□ -1.85
SF3B1-207ENST00000468925 C14orf132Q9NPU4 83 aa3.5□□□□□ -1.85
SF3B1-207ENST00000468925 SDK2Q58EX2 2172 aa3.5□□□□□ -1.85
SF3B1-207ENST00000468925 PRR14LQ5THK1 2151 aa3.5□□□□□ -1.85
SF3B1-207ENST00000468925 ZGRF1Q86YA3 2104 aa3.5□□□□□ -1.85
SF3B1-207ENST00000468925 ANKRD17O75179 2603 aaKnown RBP3.5□□□□□ -1.85
SF3B1-207ENST00000468925 ZNF462Q96JM2 2506 aa3.49□□□□□ -1.85
SF3B1-207ENST00000468925 SMG1Q96Q15 3661 aaKnown RBP3.49□□□□□ -1.85
SF3B1-207ENST00000468925 TRAV23DV6A0A075B6W5 121 aa3.49□□□□□ -1.85
SF3B1-207ENST00000468925 KLLNB2CW77 178 aa3.49□□□□□ -1.85
SF3B1-207ENST00000468925 M0R1B8 84 aa3.49□□□□□ -1.85
SF3B1-207ENST00000468925 SAA4P35542 130 aa3.49□□□□□ -1.85
SF3B1-207ENST00000468925 SNRPD3P62318 126 aaKnown RBP3.49□□□□□ -1.85
SF3B1-207ENST00000468925 MINOS1Q5TGZ0 78 aa3.49□□□□□ -1.85
SF3B1-207ENST00000468925 Q8N2B8 174 aa3.49□□□□□ -1.85
SF3B1-207ENST00000468925 CNEP1R1Q8N9A8 125 aa3.49□□□□□ -1.85
SF3B1-207ENST00000468925 RNASE6Q93091 150 aaKnown RBP3.49□□□□□ -1.85
SF3B1-207ENST00000468925 SPRR3Q9UBC9 169 aa3.49□□□□□ -1.85
SF3B1-207ENST00000468925 MINOS1-NBL1R4GNA1 71 aa3.49□□□□□ -1.85
SF3B1-207ENST00000468925 PTPN13Q12923 2485 aa3.49□□□□□ -1.85
SF3B1-207ENST00000468925 MYO18BQ8IUG5 2567 aa3.49□□□□□ -1.85
SF3B1-207ENST00000468925 TENM4Q6N022 2769 aa3.48□□□□□ -1.85
SF3B1-207ENST00000468925 COL27A1Q8IZC6 1860 aaPredicted RBP3.48□□□□□ -1.85
SF3B1-207ENST00000468925 IGHV3-64A0A075B6Q5 118 aa3.48□□□□□ -1.85
SF3B1-207ENST00000468925 A0A087WVE0 104 aa3.48□□□□□ -1.85
SF3B1-207ENST00000468925 LY6G6EA0A0G2JKS1 128 aa3.48□□□□□ -1.85
SF3B1-207ENST00000468925 NDUFA4O00483 81 aa3.48□□□□□ -1.85
SF3B1-207ENST00000468925 CCL4P13236 92 aa3.48□□□□□ -1.85
SF3B1-207ENST00000468925 SEC61BP60468 96 aaKnown RBP3.48□□□□□ -1.85
SF3B1-207ENST00000468925 DAD1P61803 113 aa3.48□□□□□ -1.85
SF3B1-207ENST00000468925 UBE2BP63146 152 aa3.48□□□□□ -1.85
SF3B1-207ENST00000468925 C15orf32Q32M92 178 aa3.48□□□□□ -1.85
SF3B1-207ENST00000468925 ENHOQ6UWT2 76 aa3.48□□□□□ -1.85
SF3B1-207ENST00000468925 CCL17Q92583 94 aa3.48□□□□□ -1.85
SF3B1-207ENST00000468925 ZNRD1Q9P1U0 126 aa3.48□□□□□ -1.85
SF3B1-207ENST00000468925 U3KQA8 63 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms