RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 UBE2L6O14933 153 aa14.32□□□□□ -0.12
TMEM53-207ENST00000468117 IGLC3P0DOY3 106 aa14.32□□□□□ -0.12
TMEM53-207ENST00000468117 DGAT2L7PQ6IED9 249 aa14.32□□□□□ -0.12
TMEM53-207ENST00000468117 DDTP30046 118 aa14.31□□□□□ -0.12
TMEM53-207ENST00000468117 AMELXQ99217 191 aa14.31□□□□□ -0.12
TMEM53-207ENST00000468117 TIMM21Q9BVV7 248 aa14.31□□□□□ -0.12
TMEM53-207ENST00000468117 NPSP0C0P6 89 aa14.31□□□□□ -0.12
TMEM53-207ENST00000468117 TMEM97Q5BJF2 176 aa14.31□□□□□ -0.12
TMEM53-207ENST00000468117 DNAH9Q9NYC9 4486 aa14.3□□□□□ -0.12
TMEM53-207ENST00000468117 MRPL52Q86TS9 123 aaKnown RBP14.3□□□□□ -0.12
TMEM53-207ENST00000468117 CHCHD5Q9BSY4 110 aa14.29□□□□□ -0.12
TMEM53-207ENST00000468117 C11orf86A6NJI1 115 aa14.29□□□□□ -0.12
TMEM53-207ENST00000468117 LINC00587B1AMM8 73 aa14.29□□□□□ -0.12
TMEM53-207ENST00000468117 GAGE6Q13070 117 aa14.29□□□□□ -0.12
TMEM53-207ENST00000468117 MRPL23Q16540 153 aaKnown RBP14.29□□□□□ -0.12
TMEM53-207ENST00000468117 AMMECR1LQ6DCA0 310 aa14.29□□□□□ -0.12
TMEM53-207ENST00000468117 MRPS36P82909 103 aaKnown RBP14.28□□□□□ -0.12
TMEM53-207ENST00000468117 MIEN1Q9BRT3 115 aa14.28□□□□□ -0.12
TMEM53-207ENST00000468117 TP73-AS1Q9UF72 201 aa14.28□□□□□ -0.12
TMEM53-207ENST00000468117 CSDC2Q9Y534 153 aaKnown RBP14.28□□□□□ -0.12
TMEM53-207ENST00000468117 ICOSQ9Y6W8 199 aa14.28□□□□□ -0.12
TMEM53-207ENST00000468117 STAB2Q8WWQ8 2551 aa14.28□□□□□ -0.12
TMEM53-207ENST00000468117 KRTAP21-3Q3LHN1 58 aa14.27□□□□□ -0.12
TMEM53-207ENST00000468117 H7C423 109 aa14.27□□□□□ -0.13
TMEM53-207ENST00000468117 OR5A1Q8NGJ0 315 aa14.26□□□□□ -0.13
TMEM53-207ENST00000468117 UQCR10Q9UDW1 63 aa14.26□□□□□ -0.13
TMEM53-207ENST00000468117 A0A0J9YXV3 536 aa14.25□□□□□ -0.13
TMEM53-207ENST00000468117 DEFB131BA0A096LNP1 70 aa14.25□□□□□ -0.13
TMEM53-207ENST00000468117 IGKV2D-26A0A0A0MRZ7 120 aa14.25□□□□□ -0.13
TMEM53-207ENST00000468117 SMAGPQ0VAQ4 97 aa14.25□□□□□ -0.13
TMEM53-207ENST00000468117 CHAC1Q9BUX1 264 aa14.25□□□□□ -0.13
TMEM53-207ENST00000468117 CDC42SE2Q9NRR3 84 aa14.25□□□□□ -0.13
TMEM53-207ENST00000468117 NMUP48645 174 aa14.24□□□□□ -0.13
TMEM53-207ENST00000468117 TMEM101Q96IK0 257 aa14.24□□□□□ -0.13
TMEM53-207ENST00000468117 B9D2Q9BPU9 175 aa14.24□□□□□ -0.13
TMEM53-207ENST00000468117 C2orf88Q9BSF0 95 aa14.24□□□□□ -0.13
TMEM53-207ENST00000468117 NFE4Q86UQ8 179 aa14.24□□□□□ -0.13
TMEM53-207ENST00000468117 MEGF8Q7Z7M0 2845 aa14.23□□□□□ -0.13
TMEM53-207ENST00000468117 ZNF25P17030 456 aaPredicted RBP14.22□□□□□ -0.13
TMEM53-207ENST00000468117 TMEM170BQ5T4T1 132 aa14.22□□□□□ -0.13
TMEM53-207ENST00000468117 IGLV4-60A0A075B6I1 120 aa14.22□□□□□ -0.13
TMEM53-207ENST00000468117 H3BNG1 76 aa14.22□□□□□ -0.13
TMEM53-207ENST00000468117 COX8AP10176 69 aa14.22□□□□□ -0.13
TMEM53-207ENST00000468117 SH2D6Q7Z4S9 175 aa14.22□□□□□ -0.13
TMEM53-207ENST00000468117 TMEM262E9PQX1 116 aa14.21□□□□□ -0.13
TMEM53-207ENST00000468117 SLC25A34Q6PIV7 304 aa14.21□□□□□ -0.13
TMEM53-207ENST00000468117 PCP2Q8IVA1 136 aa14.21□□□□□ -0.13
TMEM53-207ENST00000468117 UBE2D1P51668 147 aa14.2□□□□□ -0.14
TMEM53-207ENST00000468117 PRKDCP78527 4128 aaKnown RBP14.2□□□□□ -0.14
TMEM53-207ENST00000468117 TTTY13Q9BZ97 58 aa14.2□□□□□ -0.14
TMEM53-207ENST00000468117 MPV17L2Q567V2 206 aa14.19□□□□□ -0.14
TMEM53-207ENST00000468117 ZNF22P17026 224 aaPredicted RBP14.19□□□□□ -0.14
TMEM53-207ENST00000468117 TRAV13-1A0A0B4J241 112 aa14.18□□□□□ -0.14
TMEM53-207ENST00000468117 TINCRA0A1B0GVN0 87 aa14.17□□□□□ -0.14
TMEM53-207ENST00000468117 HNRNPA3P51991 378 aaKnown RBP14.17□□□□□ -0.14
TMEM53-207ENST00000468117 LYPD5Q6UWN5 251 aa14.17□□□□□ -0.14
TMEM53-207ENST00000468117 TRAV10A0A0B4J240 114 aa14.17□□□□□ -0.14
TMEM53-207ENST00000468117 RBX1P62877 108 aa14.17□□□□□ -0.14
TMEM53-207ENST00000468117 LELP1Q5T871 98 aa14.17□□□□□ -0.14
TMEM53-207ENST00000468117 TRAV8-6A0A0B4J262 113 aa14.16□□□□□ -0.14
TMEM53-207ENST00000468117 E9PLD3 99 aa14.16□□□□□ -0.14
TMEM53-207ENST00000468117 BOD1L2Q8IYS8 172 aa14.16□□□□□ -0.14
TMEM53-207ENST00000468117 IGKV3OR2-268A0A0C4DH90 116 aa14.15□□□□□ -0.14
TMEM53-207ENST00000468117 A0A1B0GUV1 79 aa14.15□□□□□ -0.14
TMEM53-207ENST00000468117 DEFA6Q01524 100 aa14.15□□□□□ -0.14
TMEM53-207ENST00000468117 HERVK_113P61574 105 aa14.15□□□□□ -0.14
TMEM53-207ENST00000468117 LINC00242Q5T6M2 205 aa14.15□□□□□ -0.14
TMEM53-207ENST00000468117 Q8N3U1 123 aa14.15□□□□□ -0.14
TMEM53-207ENST00000468117 GEMIN7Q9H840 131 aaKnown RBP14.15□□□□□ -0.14
TMEM53-207ENST00000468117 TMEM223A0PJW6 202 aa14.14□□□□□ -0.15
TMEM53-207ENST00000468117 CTAG1AP78358 180 aa14.14□□□□□ -0.15
TMEM53-207ENST00000468117 COX6A2Q02221 97 aa14.14□□□□□ -0.15
TMEM53-207ENST00000468117 LINC00469Q8N7U9 141 aa14.14□□□□□ -0.15
TMEM53-207ENST00000468117 IGHV3-64A0A075B6Q5 118 aa14.12□□□□□ -0.15
TMEM53-207ENST00000468117 MAPKAPK5-AS1Q8N8E1 139 aa14.12□□□□□ -0.15
TMEM53-207ENST00000468117 CDKN2A-AS1Q9UH64 79 aa14.12□□□□□ -0.15
TMEM53-207ENST00000468117 TIRAPP58753 221 aa14.12□□□□□ -0.15
TMEM53-207ENST00000468117 FAM19A3Q7Z5A8 133 aa14.12□□□□□ -0.15
TMEM53-207ENST00000468117 DLEU1O43261 78 aa14.11□□□□□ -0.15
TMEM53-207ENST00000468117 C2orf91Q6ZV80 131 aa14.11□□□□□ -0.15
TMEM53-207ENST00000468117 HERVK_113P63121 156 aa14.1□□□□□ -0.15
TMEM53-207ENST00000468117 SEC11AP67812 179 aa14.1□□□□□ -0.15
TMEM53-207ENST00000468117 ESRGQ1W209 222 aa14.1□□□□□ -0.15
TMEM53-207ENST00000468117 CLPSL2Q6UWE3 100 aa14.1□□□□□ -0.15
TMEM53-207ENST00000468117 MRPS16Q9Y3D3 137 aaKnown RBP14.1□□□□□ -0.15
TMEM53-207ENST00000468117 IGLV5-45A0A087WSX0 123 aa14.09□□□□□ -0.15
TMEM53-207ENST00000468117 TRAV8-3A0A0A6YYJ7 113 aa14.09□□□□□ -0.15
TMEM53-207ENST00000468117 TSPEAR-AS2P59090 65 aa14.09□□□□□ -0.15
TMEM53-207ENST00000468117 SPINK8P0C7L1 97 aa14.08□□□□□ -0.15
TMEM53-207ENST00000468117 ANGP03950 147 aaKnown RBP14.08□□□□□ -0.16
TMEM53-207ENST00000468117 NHLRC4P0CG21 123 aaPredicted RBP14.08□□□□□ -0.16
TMEM53-207ENST00000468117 LINC00269Q8N2A0 174 aa14.07□□□□□ -0.16
TMEM53-207ENST00000468117 LINC00959A0A1B0GUT2 108 aa14.07□□□□□ -0.16
TMEM53-207ENST00000468117 WFDC10BQ8IUB3 73 aa14.07□□□□□ -0.16
TMEM53-207ENST00000468117 J3QQQ9 107 aa14.06□□□□□ -0.16
TMEM53-207ENST00000468117 LEPROTO15243 131 aa14.06□□□□□ -0.16
TMEM53-207ENST00000468117 MYMXA0A1B0GTQ4 84 aa14.05□□□□□ -0.16
TMEM53-207ENST00000468117 IGLL5B9A064 214 aa14.05□□□□□ -0.16
TMEM53-207ENST00000468117 H3BRM9 83 aa14.05□□□□□ -0.16
TMEM53-207ENST00000468117 IGHV3-30-3P0DP02 117 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 199 ms