RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 TRBV25-1A0A075B6N4 114 aa13.11□□□□□ -0.31
CHRNA4-203ENST00000467563 TRBV6-8A0A0A6YYG3 113 aa13.11□□□□□ -0.31
CHRNA4-203ENST00000467563 HTN3P15516 51 aa13.11□□□□□ -0.31
CHRNA4-203ENST00000467563 C11orf68Q9H3H3 251 aaKnown RBP13.11□□□□□ -0.31
CHRNA4-203ENST00000467563 TRAV26-1A0A087WT03 109 aa13.1□□□□□ -0.31
CHRNA4-203ENST00000467563 MRPS36P82909 103 aaKnown RBP13.1□□□□□ -0.31
CHRNA4-203ENST00000467563 MRPL52Q86TS9 123 aaKnown RBP13.1□□□□□ -0.31
CHRNA4-203ENST00000467563 A0A0J9YXV3 536 aa13.09□□□□□ -0.31
CHRNA4-203ENST00000467563 DGAT2L7PQ6IED9 249 aa13.09□□□□□ -0.31
CHRNA4-203ENST00000467563 NFE4Q86UQ8 179 aa13.09□□□□□ -0.31
CHRNA4-203ENST00000467563 BOD1L2Q8IYS8 172 aa13.09□□□□□ -0.31
CHRNA4-203ENST00000467563 TTTY13Q9BZ97 58 aa13.09□□□□□ -0.31
CHRNA4-203ENST00000467563 A0A096LPF7 62 aa13.09□□□□□ -0.31
CHRNA4-203ENST00000467563 DEFB121Q5J5C9 76 aa13.09□□□□□ -0.31
CHRNA4-203ENST00000467563 CHAC1Q9BUX1 264 aa13.09□□□□□ -0.31
CHRNA4-203ENST00000467563 CSDC2Q9Y534 153 aaKnown RBP13.08□□□□□ -0.32
CHRNA4-203ENST00000467563 A0A0J9YWU9 116 aa13.08□□□□□ -0.32
CHRNA4-203ENST00000467563 UBE2L6O14933 153 aa13.08□□□□□ -0.32
CHRNA4-203ENST00000467563 MRPS16Q9Y3D3 137 aaKnown RBP13.08□□□□□ -0.32
CHRNA4-203ENST00000467563 SNHG12Q9BXW3 62 aa13.07□□□□□ -0.32
CHRNA4-203ENST00000467563 EREGO14944 169 aa13.06□□□□□ -0.32
CHRNA4-203ENST00000467563 TMEM97Q5BJF2 176 aa13.06□□□□□ -0.32
CHRNA4-203ENST00000467563 TMEM170BQ5T4T1 132 aa13.06□□□□□ -0.32
CHRNA4-203ENST00000467563 C2orf91Q6ZV80 131 aa13.06□□□□□ -0.32
CHRNA4-203ENST00000467563 LURAP1LQ8IV03 231 aa13.06□□□□□ -0.32
CHRNA4-203ENST00000467563 MRAPQ8TCY5 172 aa13.06□□□□□ -0.32
CHRNA4-203ENST00000467563 H7C423 109 aa13.06□□□□□ -0.32
CHRNA4-203ENST00000467563 GAGE6Q13070 117 aa13.06□□□□□ -0.32
CHRNA4-203ENST00000467563 TM2D3Q9BRN9 247 aa13.06□□□□□ -0.32
CHRNA4-203ENST00000467563 DLEU1O43261 78 aa13.05□□□□□ -0.32
CHRNA4-203ENST00000467563 AMMECR1LQ6DCA0 310 aa13.05□□□□□ -0.32
CHRNA4-203ENST00000467563 CDC42SE2Q9NRR3 84 aa13.05□□□□□ -0.32
CHRNA4-203ENST00000467563 E9PLD3 99 aa13.04□□□□□ -0.32
CHRNA4-203ENST00000467563 ZNF22P17026 224 aaPredicted RBP13.04□□□□□ -0.32
CHRNA4-203ENST00000467563 OR5A1Q8NGJ0 315 aa13.04□□□□□ -0.32
CHRNA4-203ENST00000467563 SPATA25Q9BR10 227 aa13.04□□□□□ -0.32
CHRNA4-203ENST00000467563 C2orf88Q9BSF0 95 aa13.04□□□□□ -0.32
CHRNA4-203ENST00000467563 CHCHD5Q9BSY4 110 aa13.04□□□□□ -0.32
CHRNA4-203ENST00000467563 TRAV8-6A0A0B4J262 113 aa13.04□□□□□ -0.32
CHRNA4-203ENST00000467563 UBE2D1P51668 147 aa13.04□□□□□ -0.32
CHRNA4-203ENST00000467563 Q6ZTC4 211 aa13.04□□□□□ -0.32
CHRNA4-203ENST00000467563 M0R143 59 aa13.03□□□□□ -0.32
CHRNA4-203ENST00000467563 SMAGPQ0VAQ4 97 aa13.03□□□□□ -0.32
CHRNA4-203ENST00000467563 MAPKAPK5-AS1Q8N8E1 139 aa13.03□□□□□ -0.32
CHRNA4-203ENST00000467563 TMEM101Q96IK0 257 aa13.02□□□□□ -0.33
CHRNA4-203ENST00000467563 TINCRA0A1B0GVN0 87 aa13.01□□□□□ -0.33
CHRNA4-203ENST00000467563 HUWE1Q7Z6Z7 4374 aaKnown RBP13.01□□□□□ -0.33
CHRNA4-203ENST00000467563 IGLV4-60A0A075B6I1 120 aa13.01□□□□□ -0.33
CHRNA4-203ENST00000467563 ZNF25P17030 456 aaPredicted RBP13.01□□□□□ -0.33
CHRNA4-203ENST00000467563 NANOS2P60321 138 aaKnown RBP13.01□□□□□ -0.33
CHRNA4-203ENST00000467563 HERVK_113P61574 105 aa13.01□□□□□ -0.33
CHRNA4-203ENST00000467563 MRPL23Q16540 153 aaKnown RBP13.01□□□□□ -0.33
CHRNA4-203ENST00000467563 TMEM223A0PJW6 202 aa13□□□□□ -0.33
CHRNA4-203ENST00000467563 ICOSQ9Y6W8 199 aa13□□□□□ -0.33
CHRNA4-203ENST00000467563 C11orf45Q8TAV5 145 aa13□□□□□ -0.33
CHRNA4-203ENST00000467563 TRAV13-1A0A0B4J241 112 aa12.98□□□□□ -0.33
CHRNA4-203ENST00000467563 SIVA1O15304 175 aa12.98□□□□□ -0.33
CHRNA4-203ENST00000467563 HINT1P49773 126 aaPredicted RBP12.98□□□□□ -0.33
CHRNA4-203ENST00000467563 BATFQ16520 125 aa12.98□□□□□ -0.33
CHRNA4-203ENST00000467563 TSPEAR-AS2P59090 65 aa12.98□□□□□ -0.33
CHRNA4-203ENST00000467563 MPV17L2Q567V2 206 aa12.98□□□□□ -0.33
CHRNA4-203ENST00000467563 LINC00242Q5T6M2 205 aa12.98□□□□□ -0.33
CHRNA4-203ENST00000467563 COX6A2Q02221 97 aa12.97□□□□□ -0.33
CHRNA4-203ENST00000467563 GEMIN7Q9H840 131 aaKnown RBP12.97□□□□□ -0.33
CHRNA4-203ENST00000467563 IGHV3-64A0A075B6Q5 118 aa12.97□□□□□ -0.33
CHRNA4-203ENST00000467563 TIRAPP58753 221 aa12.97□□□□□ -0.33
CHRNA4-203ENST00000467563 FAM19A3Q7Z5A8 133 aa12.97□□□□□ -0.33
CHRNA4-203ENST00000467563 LINC00469Q8N7U9 141 aa12.97□□□□□ -0.33
CHRNA4-203ENST00000467563 MYMXA0A1B0GTQ4 84 aa12.96□□□□□ -0.33
CHRNA4-203ENST00000467563 TMEM262E9PQX1 116 aa12.96□□□□□ -0.33
CHRNA4-203ENST00000467563 SH2D6Q7Z4S9 175 aa12.95□□□□□ -0.34
CHRNA4-203ENST00000467563 CDKN2A-AS1Q9UH64 79 aa12.95□□□□□ -0.34
CHRNA4-203ENST00000467563 DNHD1Q96M86 4753 aa12.95□□□□□ -0.34
CHRNA4-203ENST00000467563 IGLV5-45A0A087WSX0 123 aa12.95□□□□□ -0.34
CHRNA4-203ENST00000467563 H3BNG1 76 aa12.95□□□□□ -0.34
CHRNA4-203ENST00000467563 RBX1P62877 108 aa12.95□□□□□ -0.34
CHRNA4-203ENST00000467563 A0A1B0GUV1 79 aa12.94□□□□□ -0.34
CHRNA4-203ENST00000467563 TRAV8-3A0A0A6YYJ7 113 aa12.93□□□□□ -0.34
CHRNA4-203ENST00000467563 ZNF815PA8K554 130 aa12.93□□□□□ -0.34
CHRNA4-203ENST00000467563 J3QQQ9 107 aa12.93□□□□□ -0.34
CHRNA4-203ENST00000467563 LEPROTO15243 131 aa12.93□□□□□ -0.34
CHRNA4-203ENST00000467563 HIGD1BQ9P298 99 aa12.93□□□□□ -0.34
CHRNA4-203ENST00000467563 DEFB131BA0A096LNP1 70 aa12.93□□□□□ -0.34
CHRNA4-203ENST00000467563 HERVK_113P63121 156 aa12.93□□□□□ -0.34
CHRNA4-203ENST00000467563 LBHQ53QV2 105 aaPredicted RBP12.93□□□□□ -0.34
CHRNA4-203ENST00000467563 IGKV3OR2-268A0A0C4DH90 116 aa12.92□□□□□ -0.34
CHRNA4-203ENST00000467563 SPINK8P0C7L1 97 aa12.92□□□□□ -0.34
CHRNA4-203ENST00000467563 BVES-AS1Q5T3Y7 98 aa12.92□□□□□ -0.34
CHRNA4-203ENST00000467563 SEC11AP67812 179 aa12.92□□□□□ -0.34
CHRNA4-203ENST00000467563 LELP1Q5T871 98 aa12.92□□□□□ -0.34
CHRNA4-203ENST00000467563 Q8N3U1 123 aa12.92□□□□□ -0.34
CHRNA4-203ENST00000467563 IGHV3-30-3P0DP02 117 aa12.91□□□□□ -0.34
CHRNA4-203ENST00000467563 LYPD5Q6UWN5 251 aa12.91□□□□□ -0.34
CHRNA4-203ENST00000467563 IGHV1-58A0A0C4DH39 117 aa12.9□□□□□ -0.34
CHRNA4-203ENST00000467563 PLEKHB2Q96CS7 222 aa12.9□□□□□ -0.34
CHRNA4-203ENST00000467563 DNAH9Q9NYC9 4486 aa12.9□□□□□ -0.34
CHRNA4-203ENST00000467563 LGALS3P17931 250 aaKnown RBP12.9□□□□□ -0.34
CHRNA4-203ENST00000467563 HSD52Q0P140 79 aa12.89□□□□□ -0.35
CHRNA4-203ENST00000467563 H3BRM9 83 aa12.89□□□□□ -0.35
CHRNA4-203ENST00000467563 COL7A1Q02388 2944 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms