RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 MT-ND4LP03901 98 aa3.52□□□□□ -1.85
PTCD3-207ENST00000467273 TGFBR1P36897 503 aa3.52□□□□□ -1.85
PTCD3-207ENST00000467273 SRPXP78539 464 aa3.52□□□□□ -1.85
PTCD3-207ENST00000467273 ERCC8Q13216 396 aa3.52□□□□□ -1.85
PTCD3-207ENST00000467273 C6orf99Q4VX62 202 aa3.52□□□□□ -1.85
PTCD3-207ENST00000467273 NMSQ5H8A3 153 aa3.52□□□□□ -1.85
PTCD3-207ENST00000467273 TMEM14EPQ6UXP3 125 aa3.52□□□□□ -1.85
PTCD3-207ENST00000467273 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.52□□□□□ -1.85
PTCD3-207ENST00000467273 LINC00299Q6ZSB3 139 aa3.52□□□□□ -1.85
PTCD3-207ENST00000467273 FAM19A3Q7Z5A8 133 aa3.52□□□□□ -1.85
PTCD3-207ENST00000467273 ODF3Q96PU9 254 aa3.52□□□□□ -1.85
PTCD3-207ENST00000467273 TRGV9Q99603 122 aa3.52□□□□□ -1.85
PTCD3-207ENST00000467273 VGLL1Q99990 258 aa3.52□□□□□ -1.85
PTCD3-207ENST00000467273 SLC25A21Q9BQT8 299 aaPredicted RBP3.52□□□□□ -1.85
PTCD3-207ENST00000467273 NAA38Q9BRA0 125 aaKnown RBP3.52□□□□□ -1.85
PTCD3-207ENST00000467273 TXNDC17Q9BRA2 123 aa3.52□□□□□ -1.85
PTCD3-207ENST00000467273 MRPL32Q9BYC8 188 aaKnown RBP3.52□□□□□ -1.85
PTCD3-207ENST00000467273 DUSP21Q9H596 190 aa3.52□□□□□ -1.85
PTCD3-207ENST00000467273 TPRKBQ9Y3C4 175 aa3.52□□□□□ -1.85
PTCD3-207ENST00000467273 DNAH8Q96JB1 4490 aa3.52□□□□□ -1.85
PTCD3-207ENST00000467273 IGKV1D-37A0A075B6S9 117 aa3.51□□□□□ -1.85
PTCD3-207ENST00000467273 SMIM26A0A096LP01 95 aa3.51□□□□□ -1.85
PTCD3-207ENST00000467273 C3orf85A0A1B0GTC6 90 aa3.51□□□□□ -1.85
PTCD3-207ENST00000467273 SPINK4O60575 86 aa3.51□□□□□ -1.85
PTCD3-207ENST00000467273 PMP2P02689 132 aa3.51□□□□□ -1.85
PTCD3-207ENST00000467273 IL7P13232 177 aa3.51□□□□□ -1.85
PTCD3-207ENST00000467273 PGAM2P15259 253 aa3.51□□□□□ -1.85
PTCD3-207ENST00000467273 MP68P56378 58 aa3.51□□□□□ -1.85
PTCD3-207ENST00000467273 ZNF90Q03938 601 aa3.51□□□□□ -1.85
PTCD3-207ENST00000467273 MEIG1Q5JSS6 88 aa3.51□□□□□ -1.85
PTCD3-207ENST00000467273 FAM74A1Q5RGS3 127 aa3.51□□□□□ -1.85
PTCD3-207ENST00000467273 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
PTCD3-207ENST00000467273 PRR15Q8IV56 129 aa3.51□□□□□ -1.85
PTCD3-207ENST00000467273 ZNF664Q8N3J9 261 aa3.51□□□□□ -1.85
PTCD3-207ENST00000467273 RNF182Q8N6D2 247 aa3.51□□□□□ -1.85
PTCD3-207ENST00000467273 TMEM75Q8N9X5 138 aa3.51□□□□□ -1.85
PTCD3-207ENST00000467273 DERL1Q9BUN8 251 aa3.51□□□□□ -1.85
PTCD3-207ENST00000467273 TMEM191AQ9H0A3 160 aa3.51□□□□□ -1.85
PTCD3-207ENST00000467273 SLC25A22Q9H936 323 aa3.51□□□□□ -1.85
PTCD3-207ENST00000467273 TNXBP22105 4242 aa3.5□□□□□ -1.85
PTCD3-207ENST00000467273 IGLV7-46A0A075B6I9 117 aa3.5□□□□□ -1.85
PTCD3-207ENST00000467273 TRGV1A0A0A0MS02 117 aa3.5□□□□□ -1.85
PTCD3-207ENST00000467273 C7orf71A4D174 169 aa3.5□□□□□ -1.85
PTCD3-207ENST00000467273 MEIS3P1A6NDR6 274 aa3.5□□□□□ -1.85
PTCD3-207ENST00000467273 CEBPZOSA8MTT3 80 aa3.5□□□□□ -1.85
PTCD3-207ENST00000467273 C9JCJ5 164 aa3.5□□□□□ -1.85
PTCD3-207ENST00000467273 CCDC179H3BU77 68 aa3.5□□□□□ -1.85
PTCD3-207ENST00000467273 APOMO95445 188 aa3.5□□□□□ -1.85
PTCD3-207ENST00000467273 HERVK_113P63121 156 aa3.5□□□□□ -1.85
PTCD3-207ENST00000467273 LELP1Q5T871 98 aa3.5□□□□□ -1.85
PTCD3-207ENST00000467273 Q8N976 141 aa3.5□□□□□ -1.85
PTCD3-207ENST00000467273 OR10D4PQ8NGN7 298 aa3.5□□□□□ -1.85
PTCD3-207ENST00000467273 IMUPQ9GZP8 106 aa3.5□□□□□ -1.85
PTCD3-207ENST00000467273 COMMD3Q9UBI1 195 aa3.5□□□□□ -1.85
PTCD3-207ENST00000467273 IGHV6-1A0A0B4J1U7 121 aa3.49□□□□□ -1.85
PTCD3-207ENST00000467273 A0A0D9SG52 128 aa3.49□□□□□ -1.85
PTCD3-207ENST00000467273 FNDC10F2Z333 226 aa3.49□□□□□ -1.85
PTCD3-207ENST00000467273 TMEM250H0YL14 139 aa3.49□□□□□ -1.85
PTCD3-207ENST00000467273 ZNF846Q147U1 533 aa3.49□□□□□ -1.85
PTCD3-207ENST00000467273 ATP6V0E2Q8NHE4 81 aa3.49□□□□□ -1.85
PTCD3-207ENST00000467273 S100A16Q96FQ6 103 aaKnown RBP3.49□□□□□ -1.85
PTCD3-207ENST00000467273 SLC50A1Q9BRV3 221 aa3.49□□□□□ -1.85
PTCD3-207ENST00000467273 PARLQ9H300 379 aa3.49□□□□□ -1.85
PTCD3-207ENST00000467273 DPH3P1Q9H4G8 78 aa3.49□□□□□ -1.85
PTCD3-207ENST00000467273 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.48□□□□□ -1.85
PTCD3-207ENST00000467273 TRAV12-3A0A0B4J271 114 aa3.48□□□□□ -1.85
PTCD3-207ENST00000467273 TRGV4A0A0C4DH28 118 aa3.48□□□□□ -1.85
PTCD3-207ENST00000467273 H3BRN7 92 aa3.48□□□□□ -1.85
PTCD3-207ENST00000467273 SLC25A5P05141 298 aaKnown RBP3.48□□□□□ -1.85
PTCD3-207ENST00000467273 ZNF138P52744 262 aa3.48□□□□□ -1.85
PTCD3-207ENST00000467273 WFDC2Q14508 124 aa3.48□□□□□ -1.85
PTCD3-207ENST00000467273 Q5BKY6 102 aa3.48□□□□□ -1.85
PTCD3-207ENST00000467273 LCN15Q6UWW0 184 aa3.48□□□□□ -1.85
PTCD3-207ENST00000467273 LINC00173Q6ZV60 143 aa3.48□□□□□ -1.85
PTCD3-207ENST00000467273 PRNTQ86SH4 94 aa3.48□□□□□ -1.85
PTCD3-207ENST00000467273 LINC01600Q96MT4 127 aa3.48□□□□□ -1.85
PTCD3-207ENST00000467273 SHANK2-AS3Q9BTD1 123 aa3.48□□□□□ -1.85
PTCD3-207ENST00000467273 SPANXDQ9BXN6 97 aa3.48□□□□□ -1.85
PTCD3-207ENST00000467273 OTORQ9NRC9 128 aa3.48□□□□□ -1.85
PTCD3-207ENST00000467273 TXNL4BQ9NX01 149 aaKnown RBP3.48□□□□□ -1.85
PTCD3-207ENST00000467273 IGHV1OR15-1A0A075B7D0 117 aa3.47□□□□□ -1.85
PTCD3-207ENST00000467273 IGKV1OR2-108A0A075B7D4 117 aa3.47□□□□□ -1.85
PTCD3-207ENST00000467273 PIGBOS1A0A0B4J2F0 54 aa3.47□□□□□ -1.85
PTCD3-207ENST00000467273 CRYM-AS1A6NIL9 109 aa3.47□□□□□ -1.85
PTCD3-207ENST00000467273 M0R381 172 aa3.47□□□□□ -1.85
PTCD3-207ENST00000467273 IGHV3-53P01767 116 aa3.47□□□□□ -1.85
PTCD3-207ENST00000467273 NMBP08949 121 aa3.47□□□□□ -1.85
PTCD3-207ENST00000467273 TMBIM6P55061 237 aa3.47□□□□□ -1.85
PTCD3-207ENST00000467273 TAS2R19P59542 299 aa3.47□□□□□ -1.85
PTCD3-207ENST00000467273 KIAA0087Q14695 138 aa3.47□□□□□ -1.85
PTCD3-207ENST00000467273 C14orf177Q52M58 125 aa3.47□□□□□ -1.85
PTCD3-207ENST00000467273 UBE2NLQ5JXB2 153 aa3.47□□□□□ -1.85
PTCD3-207ENST00000467273 KTN1-AS1Q86SY8 53 aa3.47□□□□□ -1.85
PTCD3-207ENST00000467273 Q8NBF4 154 aa3.47□□□□□ -1.85
PTCD3-207ENST00000467273 ZNF431Q8TF32 576 aaPredicted RBP3.47□□□□□ -1.85
PTCD3-207ENST00000467273 RMI2Q96E14 147 aa3.47□□□□□ -1.85
PTCD3-207ENST00000467273 OPRPNQ99935 248 aaPredicted RBP3.47□□□□□ -1.85
PTCD3-207ENST00000467273 MIEN1Q9BRT3 115 aa3.47□□□□□ -1.85
PTCD3-207ENST00000467273 FAM236AA0A1B0GUQ0 79 aa3.46□□□□□ -1.86
PTCD3-207ENST00000467273 FAM236BA0A1B0GV22 79 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms