RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 VCX2Q9H322 139 aa6.73□□□□□ -1.33
APOBEC1-202ENST00000467171 UBE2D4Q9Y2X8 147 aa6.73□□□□□ -1.33
APOBEC1-202ENST00000467171 MAST4O15021 2626 aa6.73□□□□□ -1.33
APOBEC1-202ENST00000467171 FBN1P35555 2871 aaKnown RBP6.72□□□□□ -1.33
APOBEC1-202ENST00000467171 IGHV3-38A0A0C4DH36 116 aa6.72□□□□□ -1.33
APOBEC1-202ENST00000467171 H7C423 109 aa6.72□□□□□ -1.33
APOBEC1-202ENST00000467171 DEFB130BP0DP73 79 aa6.72□□□□□ -1.33
APOBEC1-202ENST00000467171 DEFB130AP0DP74 79 aa6.72□□□□□ -1.33
APOBEC1-202ENST00000467171 SBSPONQ8IVN8 264 aa6.72□□□□□ -1.33
APOBEC1-202ENST00000467171 C2orf88Q9BSF0 95 aa6.72□□□□□ -1.33
APOBEC1-202ENST00000467171 SNHG12Q9BXW3 62 aa6.72□□□□□ -1.33
APOBEC1-202ENST00000467171 CSDC2Q9Y534 153 aaKnown RBP6.72□□□□□ -1.33
APOBEC1-202ENST00000467171 C11orf86A6NJI1 115 aa6.71□□□□□ -1.34
APOBEC1-202ENST00000467171 KRTAP9-7A8MTY7 169 aa6.71□□□□□ -1.34
APOBEC1-202ENST00000467171 E9PLD3 99 aa6.71□□□□□ -1.34
APOBEC1-202ENST00000467171 NTM-AS1Q6ZSK4 140 aa6.71□□□□□ -1.34
APOBEC1-202ENST00000467171 PRO0255Q9UI72 69 aa6.71□□□□□ -1.34
APOBEC1-202ENST00000467171 NACAE9PAV3 2078 aa6.7□□□□□ -1.34
APOBEC1-202ENST00000467171 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.7□□□□□ -1.34
APOBEC1-202ENST00000467171 IGKV2D-26A0A0A0MRZ7 120 aa6.7□□□□□ -1.34
APOBEC1-202ENST00000467171 IGKV2-29A2NJV5 120 aaPredicted RBP6.7□□□□□ -1.34
APOBEC1-202ENST00000467171 SPART-AS1P0CW21 52 aa6.7□□□□□ -1.34
APOBEC1-202ENST00000467171 NMUP48645 174 aa6.7□□□□□ -1.34
APOBEC1-202ENST00000467171 C2orf91Q6ZV80 131 aa6.7□□□□□ -1.34
APOBEC1-202ENST00000467171 OPRPNQ99935 248 aaPredicted RBP6.7□□□□□ -1.34
APOBEC1-202ENST00000467171 STAB1Q9NY15 2570 aa6.69□□□□□ -1.34
APOBEC1-202ENST00000467171 LOC100131303A0A0U1RQF7 123 aa6.69□□□□□ -1.34
APOBEC1-202ENST00000467171 G3V4G9 280 aa6.69□□□□□ -1.34
APOBEC1-202ENST00000467171 HERVK_113P61574 105 aa6.69□□□□□ -1.34
APOBEC1-202ENST00000467171 PCP2Q8IVA1 136 aa6.69□□□□□ -1.34
APOBEC1-202ENST00000467171 TMEM243Q9BU79 118 aa6.69□□□□□ -1.34
APOBEC1-202ENST00000467171 HIGD1BQ9P298 99 aa6.69□□□□□ -1.34
APOBEC1-202ENST00000467171 COL6A5A8TX70 2615 aa6.69□□□□□ -1.34
APOBEC1-202ENST00000467171 TRBV25-1A0A075B6N4 114 aa6.68□□□□□ -1.34
APOBEC1-202ENST00000467171 TRBV6-8A0A0A6YYG3 113 aa6.68□□□□□ -1.34
APOBEC1-202ENST00000467171 ATP5G1P05496 136 aa6.68□□□□□ -1.34
APOBEC1-202ENST00000467171 ZNF25P17030 456 aaPredicted RBP6.68□□□□□ -1.34
APOBEC1-202ENST00000467171 DAD1P61803 113 aa6.68□□□□□ -1.34
APOBEC1-202ENST00000467171 DGAT2L7PQ6IED9 249 aa6.68□□□□□ -1.34
APOBEC1-202ENST00000467171 FAM19A3Q7Z5A8 133 aa6.68□□□□□ -1.34
APOBEC1-202ENST00000467171 CHAC1Q9BUX1 264 aa6.68□□□□□ -1.34
APOBEC1-202ENST00000467171 DNAH3Q8TD57 4116 aa6.68□□□□□ -1.34
APOBEC1-202ENST00000467171 CMYA5Q8N3K9 4069 aa6.68□□□□□ -1.34
APOBEC1-202ENST00000467171 ANK2Q01484 3957 aa6.67□□□□□ -1.34
APOBEC1-202ENST00000467171 TRAV26-1A0A087WT03 109 aa6.67□□□□□ -1.34
APOBEC1-202ENST00000467171 TINCRA0A1B0GVN0 87 aa6.67□□□□□ -1.34
APOBEC1-202ENST00000467171 TMEM223A0PJW6 202 aa6.67□□□□□ -1.34
APOBEC1-202ENST00000467171 GYPEP15421 78 aa6.67□□□□□ -1.34
APOBEC1-202ENST00000467171 ZNF22P17026 224 aaPredicted RBP6.67□□□□□ -1.34
APOBEC1-202ENST00000467171 TIRAPP58753 221 aa6.67□□□□□ -1.34
APOBEC1-202ENST00000467171 KPRPQ5T749 579 aaPredicted RBP6.67□□□□□ -1.34
APOBEC1-202ENST00000467171 CEMP1Q6PRD7 247 aaPredicted RBP6.67□□□□□ -1.34
APOBEC1-202ENST00000467171 Q6ZUT4 128 aa6.67□□□□□ -1.34
APOBEC1-202ENST00000467171 ATP6V0E2Q8NHE4 81 aa6.67□□□□□ -1.34
APOBEC1-202ENST00000467171 C11orf68Q9H3H3 251 aaKnown RBP6.67□□□□□ -1.34
APOBEC1-202ENST00000467171 CELA1Q9UNI1 258 aa6.67□□□□□ -1.34
APOBEC1-202ENST00000467171 A0A0J9YXV3 536 aa6.66□□□□□ -1.34
APOBEC1-202ENST00000467171 DEFB4AO15263 64 aa6.66□□□□□ -1.34
APOBEC1-202ENST00000467171 UBE2D1P51668 147 aa6.66□□□□□ -1.34
APOBEC1-202ENST00000467171 HSD52Q0P140 79 aa6.66□□□□□ -1.34
APOBEC1-202ENST00000467171 COL5A1-AS1Q5SY13 56 aa6.66□□□□□ -1.34
APOBEC1-202ENST00000467171 TMEM170BQ5T4T1 132 aa6.66□□□□□ -1.34
APOBEC1-202ENST00000467171 VSIG2Q96IQ7 327 aa6.66□□□□□ -1.34
APOBEC1-202ENST00000467171 CDC42SE2Q9NRR3 84 aa6.66□□□□□ -1.34
APOBEC1-202ENST00000467171 TP73-AS1Q9UF72 201 aa6.66□□□□□ -1.34
APOBEC1-202ENST00000467171 IGLV5-45A0A087WSX0 123 aa6.65□□□□□ -1.34
APOBEC1-202ENST00000467171 TRAV8-6A0A0B4J262 113 aa6.65□□□□□ -1.34
APOBEC1-202ENST00000467171 MYMXA0A1B0GTQ4 84 aa6.65□□□□□ -1.34
APOBEC1-202ENST00000467171 UBE2L6O14933 153 aa6.65□□□□□ -1.34
APOBEC1-202ENST00000467171 LEPROTO15243 131 aa6.65□□□□□ -1.34
APOBEC1-202ENST00000467171 TCTAP57738 103 aa6.65□□□□□ -1.34
APOBEC1-202ENST00000467171 SEC11AP67812 179 aa6.65□□□□□ -1.34
APOBEC1-202ENST00000467171 BVES-AS1Q5T3Y7 98 aa6.65□□□□□ -1.34
APOBEC1-202ENST00000467171 SH2D6Q7Z4S9 175 aa6.65□□□□□ -1.34
APOBEC1-202ENST00000467171 OR5A1Q8NGJ0 315 aa6.65□□□□□ -1.34
APOBEC1-202ENST00000467171 TMEM101Q96IK0 257 aa6.65□□□□□ -1.34
APOBEC1-202ENST00000467171 KRTAP4-11Q9BYQ6 195 aa6.65□□□□□ -1.34
APOBEC1-202ENST00000467171 HINT1P49773 126 aaPredicted RBP6.64□□□□□ -1.35
APOBEC1-202ENST00000467171 TAL2Q16559 108 aa6.64□□□□□ -1.35
APOBEC1-202ENST00000467171 C12orf74Q32Q52 190 aa6.64□□□□□ -1.35
APOBEC1-202ENST00000467171 MPV17L2Q567V2 206 aa6.64□□□□□ -1.35
APOBEC1-202ENST00000467171 AMMECR1LQ6DCA0 310 aa6.64□□□□□ -1.35
APOBEC1-202ENST00000467171 MAPKAPK5-AS1Q8N8E1 139 aa6.64□□□□□ -1.35
APOBEC1-202ENST00000467171 PLEKHB2Q96CS7 222 aa6.64□□□□□ -1.35
APOBEC1-202ENST00000467171 TTTY13Q9BZ97 58 aa6.64□□□□□ -1.35
APOBEC1-202ENST00000467171 A0A1B0GUV1 79 aa6.63□□□□□ -1.35
APOBEC1-202ENST00000467171 H3BNG1 76 aa6.63□□□□□ -1.35
APOBEC1-202ENST00000467171 HERVK_113P63121 156 aa6.63□□□□□ -1.35
APOBEC1-202ENST00000467171 BATFQ16520 125 aa6.63□□□□□ -1.35
APOBEC1-202ENST00000467171 MRPL23Q16540 153 aaKnown RBP6.63□□□□□ -1.35
APOBEC1-202ENST00000467171 IGHV1-58A0A0C4DH39 117 aa6.62□□□□□ -1.35
APOBEC1-202ENST00000467171 F5H768 121 aa6.62□□□□□ -1.35
APOBEC1-202ENST00000467171 H3BRM9 83 aa6.62□□□□□ -1.35
APOBEC1-202ENST00000467171 J3QQQ9 107 aa6.62□□□□□ -1.35
APOBEC1-202ENST00000467171 GAGE6Q13070 117 aa6.62□□□□□ -1.35
APOBEC1-202ENST00000467171 RNASE13Q5GAN3 156 aaKnown RBP6.62□□□□□ -1.35
APOBEC1-202ENST00000467171 LINC00242Q5T6M2 205 aa6.62□□□□□ -1.35
APOBEC1-202ENST00000467171 CHCHD5Q9BSY4 110 aa6.62□□□□□ -1.35
APOBEC1-202ENST00000467171 GEMIN7Q9H840 131 aaKnown RBP6.62□□□□□ -1.35
APOBEC1-202ENST00000467171 RETNQ9HD89 108 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms