RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 Q8N976 141 aa6.47□□□□□ -1.37
HPS4-209ENST00000466781 CLUHP3Q96NS8 147 aa6.47□□□□□ -1.37
HPS4-209ENST00000466781 MLST8Q9BVC4 326 aa6.47□□□□□ -1.37
HPS4-209ENST00000466781 USF3Q68DE3 2245 aa6.47□□□□□ -1.37
HPS4-209ENST00000466781 DYSFO75923 2080 aa6.46□□□□□ -1.37
HPS4-209ENST00000466781 PSMG3-AS1Q96PY0 264 aa6.46□□□□□ -1.38
HPS4-209ENST00000466781 FAM236DA0A1B0GTK5 79 aa6.46□□□□□ -1.38
HPS4-209ENST00000466781 FAM236CP0DP71 79 aa6.46□□□□□ -1.38
HPS4-209ENST00000466781 LINC00308Q8TCZ7 52 aa6.46□□□□□ -1.38
HPS4-209ENST00000466781 NANOS2P60321 138 aaKnown RBP6.46□□□□□ -1.38
HPS4-209ENST00000466781 CD164L2Q6UWJ8 174 aa6.46□□□□□ -1.38
HPS4-209ENST00000466781 C10orf99Q6UWK7 81 aa6.46□□□□□ -1.38
HPS4-209ENST00000466781 SMR3AQ99954 134 aa6.46□□□□□ -1.38
HPS4-209ENST00000466781 RPL37AP8A6NKH3 93 aa6.45□□□□□ -1.38
HPS4-209ENST00000466781 PTH2Q96A98 100 aa6.45□□□□□ -1.38
HPS4-209ENST00000466781 ZNF22P17026 224 aaPredicted RBP6.45□□□□□ -1.38
HPS4-209ENST00000466781 KRTAP10-9P60411 292 aa6.45□□□□□ -1.38
HPS4-209ENST00000466781 TDRG1Q3Y452 100 aa6.45□□□□□ -1.38
HPS4-209ENST00000466781 C6orf99Q4VX62 202 aa6.45□□□□□ -1.38
HPS4-209ENST00000466781 IGLC6P0CF74 106 aa6.45□□□□□ -1.38
HPS4-209ENST00000466781 GDF5OSQ5U4N7 250 aa6.45□□□□□ -1.38
HPS4-209ENST00000466781 C20orf197Q8N268 126 aa6.44□□□□□ -1.38
HPS4-209ENST00000466781 V9GYY9 64 aa6.44□□□□□ -1.38
HPS4-209ENST00000466781 UNC80Q8N2C7 3258 aa6.44□□□□□ -1.38
HPS4-209ENST00000466781 WFDC13Q8IUB5 93 aa6.44□□□□□ -1.38
HPS4-209ENST00000466781 LINC01006Q8NI28 216 aa6.44□□□□□ -1.38
HPS4-209ENST00000466781 PROK1P58294 105 aa6.44□□□□□ -1.38
HPS4-209ENST00000466781 MRPL55Q7Z7F7 128 aaKnown RBP6.44□□□□□ -1.38
HPS4-209ENST00000466781 LINC00574Q9H8X3 128 aa6.44□□□□□ -1.38
HPS4-209ENST00000466781 ZGRF1Q86YA3 2104 aa6.44□□□□□ -1.38
HPS4-209ENST00000466781 M0QY20 66 aa6.44□□□□□ -1.38
HPS4-209ENST00000466781 RBX1P62877 108 aa6.44□□□□□ -1.38
HPS4-209ENST00000466781 Q8N9L7 120 aa6.44□□□□□ -1.38
HPS4-209ENST00000466781 NDUFC2-KCTD14E9PQ53 114 aa6.43□□□□□ -1.38
HPS4-209ENST00000466781 C10orf25Q5T742 122 aa6.43□□□□□ -1.38
HPS4-209ENST00000466781 LYPD6Q86Y78 171 aa6.43□□□□□ -1.38
HPS4-209ENST00000466781 POLEQ07864 2286 aa6.43□□□□□ -1.38
HPS4-209ENST00000466781 Q6ZVQ6 151 aa6.43□□□□□ -1.38
HPS4-209ENST00000466781 PLA2G2EQ9NZK7 142 aa6.43□□□□□ -1.38
HPS4-209ENST00000466781 DMDP11532 3685 aa6.43□□□□□ -1.38
HPS4-209ENST00000466781 IGHV4-30-4P0DP06 118 aa6.43□□□□□ -1.38
HPS4-209ENST00000466781 ZFAND3Q9H8U3 227 aa6.43□□□□□ -1.38
HPS4-209ENST00000466781 ADAMTS20P59510 1910 aa6.43□□□□□ -1.38
HPS4-209ENST00000466781 BPTFQ12830 3046 aa6.43□□□□□ -1.38
HPS4-209ENST00000466781 IGLV5-52A0A0A0MRZ9 124 aa6.43□□□□□ -1.38
HPS4-209ENST00000466781 A0A1B0GXF2 115 aa6.43□□□□□ -1.38
HPS4-209ENST00000466781 G3V4G9 280 aa6.43□□□□□ -1.38
HPS4-209ENST00000466781 FSHBP01225 129 aa6.43□□□□□ -1.38
HPS4-209ENST00000466781 FAM240AA0A1B0GVK7 77 aa6.42□□□□□ -1.38
HPS4-209ENST00000466781 RPL28P46779 137 aaKnown RBP6.42□□□□□ -1.38
HPS4-209ENST00000466781 C18orf65Q6ZTR6 163 aa6.42□□□□□ -1.38
HPS4-209ENST00000466781 WFDC10AQ9H1F0 79 aa6.42□□□□□ -1.38
HPS4-209ENST00000466781 LOC100131303A0A0U1RQF7 123 aa6.42□□□□□ -1.38
HPS4-209ENST00000466781 EBI3Q14213 229 aa6.42□□□□□ -1.38
HPS4-209ENST00000466781 LINC00526Q96FQ7 95 aa6.42□□□□□ -1.38
HPS4-209ENST00000466781 RETNQ9HD89 108 aa6.42□□□□□ -1.38
HPS4-209ENST00000466781 LINC00959A0A1B0GUT2 108 aa6.42□□□□□ -1.38
HPS4-209ENST00000466781 NDUFA7O95182 113 aa6.42□□□□□ -1.38
HPS4-209ENST00000466781 ACACAQ13085 2346 aa6.41□□□□□ -1.38
HPS4-209ENST00000466781 TRBV6-5A0A0K0K1A5 114 aa6.41□□□□□ -1.38
HPS4-209ENST00000466781 FRMD6-AS1P0C7T7 363 aa6.41□□□□□ -1.38
HPS4-209ENST00000466781 Q6ZPA2 131 aa6.41□□□□□ -1.38
HPS4-209ENST00000466781 DNAH14Q0VDD8 3507 aa6.41□□□□□ -1.38
HPS4-209ENST00000466781 MUC3AQ02505 3323 aa6.41□□□□□ -1.38
HPS4-209ENST00000466781 ATP5EP56381 51 aaPredicted RBP6.41□□□□□ -1.38
HPS4-209ENST00000466781 GVINP1Q7Z2Y8 2422 aa6.41□□□□□ -1.38
HPS4-209ENST00000466781 COX17Q14061 63 aa6.41□□□□□ -1.38
HPS4-209ENST00000466781 COL4A2P08572 1712 aa6.41□□□□□ -1.38
HPS4-209ENST00000466781 CIRBP-AS1Q8TBR5 109 aa6.41□□□□□ -1.38
HPS4-209ENST00000466781 CADP27708 2225 aa6.4□□□□□ -1.38
HPS4-209ENST00000466781 GPR179Q6PRD1 2367 aa6.4□□□□□ -1.38
HPS4-209ENST00000466781 TRIAP1O43715 76 aa6.4□□□□□ -1.38
HPS4-209ENST00000466781 M0QXV9 152 aa6.4□□□□□ -1.39
HPS4-209ENST00000466781 WDFY3Q8IZQ1 3526 aa6.4□□□□□ -1.39
HPS4-209ENST00000466781 PRUNE2Q8WUY3 3088 aa6.4□□□□□ -1.39
HPS4-209ENST00000466781 UQCRQO14949 82 aa6.4□□□□□ -1.39
HPS4-209ENST00000466781 GTF3C1Q12789 2109 aa6.4□□□□□ -1.39
HPS4-209ENST00000466781 IGLV2-8P01709 118 aa6.39□□□□□ -1.39
HPS4-209ENST00000466781 OXLD1Q5BKU9 147 aa6.39□□□□□ -1.39
HPS4-209ENST00000466781 CRIP3Q6Q6R5 217 aa6.39□□□□□ -1.39
HPS4-209ENST00000466781 Q6ZQY7 126 aa6.39□□□□□ -1.39
HPS4-209ENST00000466781 PYGO1Q9Y3Y4 419 aa6.39□□□□□ -1.39
HPS4-209ENST00000466781 CHD3Q12873 2000 aaKnown RBP6.39□□□□□ -1.39
HPS4-209ENST00000466781 TRBV30A0A0K0K1B3 111 aa6.39□□□□□ -1.39
HPS4-209ENST00000466781 P0C879 139 aa6.39□□□□□ -1.39
HPS4-209ENST00000466781 ARHGAP21Q5T5U3 1957 aa6.39□□□□□ -1.39
HPS4-209ENST00000466781 FAM30AQ9NZY2 134 aa6.39□□□□□ -1.39
HPS4-209ENST00000466781 TIMM17BO60830 172 aa6.39□□□□□ -1.39
HPS4-209ENST00000466781 TSHBP01222 138 aa6.38□□□□□ -1.39
HPS4-209ENST00000466781 MRGPRG-AS1Q2M3A8 158 aa6.38□□□□□ -1.39
HPS4-209ENST00000466781 FAM19A3Q7Z5A8 133 aa6.38□□□□□ -1.39
HPS4-209ENST00000466781 C11orf1Q9H5F2 150 aa6.38□□□□□ -1.39
HPS4-209ENST00000466781 CNOT1A5YKK6 2376 aaKnown RBP6.38□□□□□ -1.39
HPS4-209ENST00000466781 DOCK10Q96BY6 2186 aa6.38□□□□□ -1.39
HPS4-209ENST00000466781 NDUFC1O43677 76 aa6.38□□□□□ -1.39
HPS4-209ENST00000466781 ZNF73O43830 326 aaPredicted RBP6.38□□□□□ -1.39
HPS4-209ENST00000466781 A6NED7 52 aa6.38□□□□□ -1.39
HPS4-209ENST00000466781 NDUFV3P56181 108 aaKnown RBP6.38□□□□□ -1.39
HPS4-209ENST00000466781 BRWD1-AS2P59051 145 aa6.38□□□□□ -1.39
HPS4-209ENST00000466781 Q6ZS46 218 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms