RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 DNAH17Q9UFH2 4485 aa9.25□□□□□ -0.93
UBA3-209ENST00000466763 IGLV10-54A0A075B6I4 117 aa9.25□□□□□ -0.93
UBA3-209ENST00000466763 A0A087WTM6 91 aa9.25□□□□□ -0.93
UBA3-209ENST00000466763 LECT2O14960 151 aa9.25□□□□□ -0.93
UBA3-209ENST00000466763 ZNF25P17030 456 aaPredicted RBP9.25□□□□□ -0.93
UBA3-209ENST00000466763 SPATA12Q7Z6I5 190 aa9.25□□□□□ -0.93
UBA3-209ENST00000466763 CBLN2Q8IUK8 224 aa9.25□□□□□ -0.93
UBA3-209ENST00000466763 BAALCQ8WXS3 180 aa9.25□□□□□ -0.93
UBA3-209ENST00000466763 SMCO4Q9NRQ5 59 aa9.25□□□□□ -0.93
UBA3-209ENST00000466763 TRAPPC1Q9Y5R8 145 aa9.25□□□□□ -0.93
UBA3-209ENST00000466763 SMAGPQ0VAQ4 97 aa9.24□□□□□ -0.93
UBA3-209ENST00000466763 Q8N8P6 123 aa9.24□□□□□ -0.93
UBA3-209ENST00000466763 PRR34Q9NV39 138 aa9.24□□□□□ -0.93
UBA3-209ENST00000466763 RPL39P62891 51 aaKnown RBP9.23□□□□□ -0.93
UBA3-209ENST00000466763 LRCOL1A6NCL2 159 aa9.22□□□□□ -0.93
UBA3-209ENST00000466763 PRSS47A8MTI9 375 aa9.22□□□□□ -0.93
UBA3-209ENST00000466763 FUSP35637 526 aaKnown RBP eCLIP9.22□□□□□ -0.93
UBA3-209ENST00000466763 IFI27P40305 119 aaPredicted RBP9.22□□□□□ -0.93
UBA3-209ENST00000466763 MRPL52Q86TS9 123 aaKnown RBP9.22□□□□□ -0.93
UBA3-209ENST00000466763 MAPKAPK5-AS1Q8N8E1 139 aa9.22□□□□□ -0.93
UBA3-209ENST00000466763 PRSS3P2Q8NHM4 247 aa9.22□□□□□ -0.93
UBA3-209ENST00000466763 ALKBH7Q9BT30 221 aaPredicted RBP9.22□□□□□ -0.93
UBA3-209ENST00000466763 NXT2Q9NPJ8 142 aaKnown RBP9.22□□□□□ -0.93
UBA3-209ENST00000466763 TRAV8-4A0A0B4J246 113 aa9.21□□□□□ -0.94
UBA3-209ENST00000466763 WFDC2Q14508 124 aa9.21□□□□□ -0.94
UBA3-209ENST00000466763 RNASE13Q5GAN3 156 aaKnown RBP9.21□□□□□ -0.94
UBA3-209ENST00000466763 ZNF664Q8N3J9 261 aa9.21□□□□□ -0.94
UBA3-209ENST00000466763 CDC42SE2Q9NRR3 84 aa9.21□□□□□ -0.94
UBA3-209ENST00000466763 UBE2D4Q9Y2X8 147 aa9.21□□□□□ -0.94
UBA3-209ENST00000466763 C16orf90A8MZG2 172 aa9.2□□□□□ -0.94
UBA3-209ENST00000466763 KRTAP10-2P60368 255 aa9.2□□□□□ -0.94
UBA3-209ENST00000466763 EPPK1P58107 5090 aaKnown RBP9.19□□□□□ -0.94
UBA3-209ENST00000466763 GAGE12HA6NDE8 117 aa9.19□□□□□ -0.94
UBA3-209ENST00000466763 ORMDL2Q53FV1 153 aa9.19□□□□□ -0.94
UBA3-209ENST00000466763 Q6ZUT4 128 aa9.19□□□□□ -0.94
UBA3-209ENST00000466763 Q8N814 137 aa9.19□□□□□ -0.94
UBA3-209ENST00000466763 YPEL4Q96NS1 127 aa9.19□□□□□ -0.94
UBA3-209ENST00000466763 FAT2Q9NYQ8 4349 aa9.18□□□□□ -0.94
UBA3-209ENST00000466763 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.18□□□□□ -0.94
UBA3-209ENST00000466763 SS18Q15532 418 aa9.18□□□□□ -0.94
UBA3-209ENST00000466763 FA2HQ7L5A8 372 aa9.18□□□□□ -0.94
UBA3-209ENST00000466763 TIMM21Q9BVV7 248 aa9.18□□□□□ -0.94
UBA3-209ENST00000466763 SPANXA1Q9NS26 97 aa9.18□□□□□ -0.94
UBA3-209ENST00000466763 CYSLTR1Q9Y271 337 aa9.18□□□□□ -0.94
UBA3-209ENST00000466763 CSDC2Q9Y534 153 aaKnown RBP9.18□□□□□ -0.94
UBA3-209ENST00000466763 LINC00959A0A1B0GUT2 108 aa9.17□□□□□ -0.94
UBA3-209ENST00000466763 K7EMI3 77 aa9.17□□□□□ -0.94
UBA3-209ENST00000466763 KRTAP26-1Q6PEX3 210 aa9.17□□□□□ -0.94
UBA3-209ENST00000466763 C2orf66Q6UXQ4 117 aa9.17□□□□□ -0.94
UBA3-209ENST00000466763 CHCHD10Q8WYQ3 142 aaPredicted RBP9.17□□□□□ -0.94
UBA3-209ENST00000466763 OPRPNQ99935 248 aaPredicted RBP9.17□□□□□ -0.94
UBA3-209ENST00000466763 IGLV5-52A0A0A0MRZ9 124 aa9.16□□□□□ -0.94
UBA3-209ENST00000466763 TRAV13-1A0A0B4J241 112 aa9.16□□□□□ -0.94
UBA3-209ENST00000466763 USP17L23D6RBM5 183 aa9.16□□□□□ -0.94
UBA3-209ENST00000466763 CCL25O15444 150 aa9.16□□□□□ -0.94
UBA3-209ENST00000466763 XCL1P47992 114 aa9.16□□□□□ -0.94
UBA3-209ENST00000466763 SCO1O75880 301 aa9.15□□□□□ -0.94
UBA3-209ENST00000466763 G0S2P27469 103 aa9.15□□□□□ -0.94
UBA3-209ENST00000466763 C14orf177Q52M58 125 aa9.15□□□□□ -0.94
UBA3-209ENST00000466763 CDPF1Q6NVV7 123 aa9.14□□□□□ -0.95
UBA3-209ENST00000466763 C18orf32Q8TCD1 76 aa9.14□□□□□ -0.95
UBA3-209ENST00000466763 IFITM10A6NMD0 228 aa9.13□□□□□ -0.95
UBA3-209ENST00000466763 C1orf196B1AJZ1 125 aa9.13□□□□□ -0.95
UBA3-209ENST00000466763 MRPS36P82909 103 aaKnown RBP9.13□□□□□ -0.95
UBA3-209ENST00000466763 LCE3BQ5TA77 95 aa9.13□□□□□ -0.95
UBA3-209ENST00000466763 NTN5Q8WTR8 489 aaPredicted RBP9.13□□□□□ -0.95
UBA3-209ENST00000466763 PYGO1Q9Y3Y4 419 aa9.13□□□□□ -0.95
UBA3-209ENST00000466763 IGLV4-3A0A075B6K6 122 aa9.12□□□□□ -0.95
UBA3-209ENST00000466763 FOXI1Q12951 378 aa9.12□□□□□ -0.95
UBA3-209ENST00000466763 Q6ZN92 141 aa9.12□□□□□ -0.95
UBA3-209ENST00000466763 TMEM141Q96I45 108 aa9.12□□□□□ -0.95
UBA3-209ENST00000466763 PKD1P98161 4303 aa9.12□□□□□ -0.95
UBA3-209ENST00000466763 HECTD4Q9Y4D8 3996 aa9.11□□□□□ -0.95
UBA3-209ENST00000466763 hDV102S1A0JD36 115 aa9.11□□□□□ -0.95
UBA3-209ENST00000466763 COLCA2A8K830 154 aa9.11□□□□□ -0.95
UBA3-209ENST00000466763 TRGC2P03986 189 aa9.11□□□□□ -0.95
UBA3-209ENST00000466763 LINC00614P0C842 121 aa9.11□□□□□ -0.95
UBA3-209ENST00000466763 GCSHP23434 173 aa9.11□□□□□ -0.95
UBA3-209ENST00000466763 CFAP161Q6P656 301 aa9.11□□□□□ -0.95
UBA3-209ENST00000466763 TEX43Q6ZNM6 134 aa9.11□□□□□ -0.95
UBA3-209ENST00000466763 FAM104AQ969W3 186 aa9.11□□□□□ -0.95
UBA3-209ENST00000466763 TOMM6Q96B49 74 aa9.11□□□□□ -0.95
UBA3-209ENST00000466763 SCGB3A1Q96QR1 104 aa9.11□□□□□ -0.95
UBA3-209ENST00000466763 AP5S1Q9NUS5 200 aa9.11□□□□□ -0.95
UBA3-209ENST00000466763 PRSS1P07477 247 aa9.1□□□□□ -0.95
UBA3-209ENST00000466763 MALP21145 153 aa9.1□□□□□ -0.95
UBA3-209ENST00000466763 RAB5BP61020 215 aa9.1□□□□□ -0.95
UBA3-209ENST00000466763 ZC2HC1BQ5TFG8 222 aa9.1□□□□□ -0.95
UBA3-209ENST00000466763 CD164L2Q6UWJ8 174 aa9.1□□□□□ -0.95
UBA3-209ENST00000466763 C2orf88Q9BSF0 95 aa9.1□□□□□ -0.95
UBA3-209ENST00000466763 VCX2Q9H322 139 aa9.1□□□□□ -0.95
UBA3-209ENST00000466763 BIRC6Q9NR09 4857 aa9.09□□□□□ -0.95
UBA3-209ENST00000466763 LINC01546A6NGU7 62 aa9.09□□□□□ -0.95
UBA3-209ENST00000466763 HIGD2BQ4VC39 106 aa9.09□□□□□ -0.95
UBA3-209ENST00000466763 C5orf38Q86SI9 138 aa9.09□□□□□ -0.95
UBA3-209ENST00000466763 DNAH11Q96DT5 4516 aa9.08□□□□□ -0.96
UBA3-209ENST00000466763 IGIPA6NJ69 53 aa9.08□□□□□ -0.96
UBA3-209ENST00000466763 COX7A2LO14548 114 aa9.08□□□□□ -0.96
UBA3-209ENST00000466763 PMCHL1Q16048 86 aa9.08□□□□□ -0.96
UBA3-209ENST00000466763 LINC01620Q4KN68 170 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms