RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 SHANK2Q9UPX8 1470 aa-0.23□□□□□ -2.45
CHMP2B-202ENST00000466696 LRRC37A2A6NM11 1700 aa-0.24□□□□□ -2.45
CHMP2B-202ENST00000466696 PARP14Q460N5 1801 aa-0.24□□□□□ -2.45
CHMP2B-202ENST00000466696 SPAARA0A1B0GVQ0 90 aa-0.24□□□□□ -2.45
CHMP2B-202ENST00000466696 I3L2K1 104 aa-0.24□□□□□ -2.45
CHMP2B-202ENST00000466696 ARPC5O15511 151 aa-0.24□□□□□ -2.45
CHMP2B-202ENST00000466696 IFNGP01579 166 aa-0.24□□□□□ -2.45
CHMP2B-202ENST00000466696 MGPP08493 103 aa-0.24□□□□□ -2.45
CHMP2B-202ENST00000466696 SPRR1BP22528 89 aa-0.24□□□□□ -2.45
CHMP2B-202ENST00000466696 SPRR2BP35325 72 aa-0.24□□□□□ -2.45
CHMP2B-202ENST00000466696 ARPC4P59998 168 aa-0.24□□□□□ -2.45
CHMP2B-202ENST00000466696 SMIM21Q3B7S5 101 aa-0.24□□□□□ -2.45
CHMP2B-202ENST00000466696 MYOZ3Q8TDC0 251 aa-0.24□□□□□ -2.45
CHMP2B-202ENST00000466696 ANP32BQ92688 251 aaKnown RBP-0.24□□□□□ -2.45
CHMP2B-202ENST00000466696 UQCR10Q9UDW1 63 aa-0.24□□□□□ -2.45
CHMP2B-202ENST00000466696 MYCBP2O75592 4640 aa-0.24□□□□□ -2.45
CHMP2B-202ENST00000466696 SIPA1L3O60292 1781 aaPredicted RBP-0.24□□□□□ -2.45
CHMP2B-202ENST00000466696 ALMS1Q8TCU4 4167 aa-0.24□□□□□ -2.45
CHMP2B-202ENST00000466696 AKAP11Q9UKA4 1901 aa-0.25□□□□□ -2.45
CHMP2B-202ENST00000466696 PDZD2O15018 2839 aa-0.25□□□□□ -2.45
CHMP2B-202ENST00000466696 MIF4GDA9UHW6 222 aaKnown RBP-0.25□□□□□ -2.45
CHMP2B-202ENST00000466696 M0R2T5 61 aa-0.25□□□□□ -2.45
CHMP2B-202ENST00000466696 PITX3O75364 302 aa-0.25□□□□□ -2.45
CHMP2B-202ENST00000466696 SFT2D2O95562 160 aa-0.25□□□□□ -2.45
CHMP2B-202ENST00000466696 WHAMMP3Q1A5X7 153 aa-0.25□□□□□ -2.45
CHMP2B-202ENST00000466696 Q6AWC8 147 aa-0.25□□□□□ -2.45
CHMP2B-202ENST00000466696 USMG5Q96IX5 58 aa-0.25□□□□□ -2.45
CHMP2B-202ENST00000466696 PPP3R2Q96LZ3 170 aa-0.25□□□□□ -2.45
CHMP2B-202ENST00000466696 NAA60Q9H7X0 242 aa-0.25□□□□□ -2.45
CHMP2B-202ENST00000466696 NDUFA4L2Q9NRX3 87 aa-0.25□□□□□ -2.45
CHMP2B-202ENST00000466696 PAIP2BQ9ULR5 123 aaKnown RBP-0.25□□□□□ -2.45
CHMP2B-202ENST00000466696 NAIPQ13075 1403 aa-0.25□□□□□ -2.45
CHMP2B-202ENST00000466696 NWD2Q9ULI1 1742 aa-0.25□□□□□ -2.45
CHMP2B-202ENST00000466696 DNAJC13O75165 2243 aa-0.25□□□□□ -2.45
CHMP2B-202ENST00000466696 COL6A3P12111 3177 aa-0.26□□□□□ -2.45
CHMP2B-202ENST00000466696 XIRP1Q702N8 1843 aaKnown RBP-0.26□□□□□ -2.45
CHMP2B-202ENST00000466696 ARFGEF1Q9Y6D6 1849 aa-0.26□□□□□ -2.45
CHMP2B-202ENST00000466696 ADGRB1O14514 1584 aa-0.26□□□□□ -2.45
CHMP2B-202ENST00000466696 MYOM3Q5VTT5 1437 aa-0.26□□□□□ -2.45
CHMP2B-202ENST00000466696 TRBV7-4A0A0J9YYF1 115 aa-0.26□□□□□ -2.45
CHMP2B-202ENST00000466696 IGLC7A0M8Q6 106 aa-0.26□□□□□ -2.45
CHMP2B-202ENST00000466696 DEFB105AQ8NG35 78 aa-0.26□□□□□ -2.45
CHMP2B-202ENST00000466696 PRO1933Q9H354 126 aa-0.26□□□□□ -2.45
CHMP2B-202ENST00000466696 SERP1Q9Y6X1 66 aa-0.26□□□□□ -2.45
CHMP2B-202ENST00000466696 VWFP04275 2813 aa-0.26□□□□□ -2.45
CHMP2B-202ENST00000466696 PI4KAP42356 2102 aa-0.26□□□□□ -2.45
CHMP2B-202ENST00000466696 MYO7BQ6PIF6 2116 aa-0.26□□□□□ -2.45
CHMP2B-202ENST00000466696 WNK3Q9BYP7 1800 aa-0.27□□□□□ -2.45
CHMP2B-202ENST00000466696 MUC22E2RYF6 1773 aaPredicted RBP-0.27□□□□□ -2.45
CHMP2B-202ENST00000466696 KDM3BQ7LBC6 1761 aa-0.27□□□□□ -2.45
CHMP2B-202ENST00000466696 SETD2Q9BYW2 2564 aaPredicted RBP-0.27□□□□□ -2.45
CHMP2B-202ENST00000466696 ARHGEF12Q9NZN5 1544 aa-0.27□□□□□ -2.45
CHMP2B-202ENST00000466696 CFTRP13569 1480 aa-0.27□□□□□ -2.45
CHMP2B-202ENST00000466696 GAPVD1Q14C86 1478 aa-0.27□□□□□ -2.45
CHMP2B-202ENST00000466696 TRBV7-3A0A075B6L6 115 aa-0.27□□□□□ -2.45
CHMP2B-202ENST00000466696 HMGN4O00479 90 aa-0.27□□□□□ -2.45
CHMP2B-202ENST00000466696 Q56UQ5 140 aa-0.27□□□□□ -2.45
CHMP2B-202ENST00000466696 MRPL54Q6P161 138 aaKnown RBP-0.27□□□□□ -2.45
CHMP2B-202ENST00000466696 C8orf59Q8N0T1 100 aaPredicted RBP-0.27□□□□□ -2.45
CHMP2B-202ENST00000466696 ARL11Q969Q4 196 aa-0.27□□□□□ -2.45
CHMP2B-202ENST00000466696 AMELXQ99217 191 aa-0.27□□□□□ -2.45
CHMP2B-202ENST00000466696 SNRNP25Q9BV90 132 aaKnown RBP-0.27□□□□□ -2.45
CHMP2B-202ENST00000466696 RERGLQ9H628 205 aa-0.27□□□□□ -2.45
CHMP2B-202ENST00000466696 PAPPAQ13219 1627 aa-0.27□□□□□ -2.45
CHMP2B-202ENST00000466696 SETBP1Q9Y6X0 1596 aa-0.28□□□□□ -2.45
CHMP2B-202ENST00000466696 GRIN2AQ12879 1464 aa-0.28□□□□□ -2.45
CHMP2B-202ENST00000466696 CCDC141Q6ZP82 1450 aa-0.28□□□□□ -2.45
CHMP2B-202ENST00000466696 BSNQ9UPA5 3926 aa-0.28□□□□□ -2.45
CHMP2B-202ENST00000466696 F6UZH7 168 aa-0.28□□□□□ -2.45
CHMP2B-202ENST00000466696 CHKB-CPT1BH3BT56 60 aa-0.28□□□□□ -2.45
CHMP2B-202ENST00000466696 SSSCA1O60232 199 aa-0.28□□□□□ -2.45
CHMP2B-202ENST00000466696 APOC2P02655 101 aa-0.28□□□□□ -2.45
CHMP2B-202ENST00000466696 CATR1Q13166 79 aa-0.28□□□□□ -2.45
CHMP2B-202ENST00000466696 KLK9Q2XQG4 91 aa-0.28□□□□□ -2.45
CHMP2B-202ENST00000466696 Q8N8P6 123 aa-0.28□□□□□ -2.45
CHMP2B-202ENST00000466696 TMEM263Q8WUH6 116 aaKnown RBP-0.28□□□□□ -2.45
CHMP2B-202ENST00000466696 DPH3Q96FX2 82 aa-0.28□□□□□ -2.45
CHMP2B-202ENST00000466696 NXT2Q9NPJ8 142 aaKnown RBP-0.28□□□□□ -2.45
CHMP2B-202ENST00000466696 LINC01558Q9Y6Z2 57 aa-0.28□□□□□ -2.45
CHMP2B-202ENST00000466696 MYH13Q9UKX3 1938 aa-0.28□□□□□ -2.46
CHMP2B-202ENST00000466696 IQSEC2Q5JU85 1478 aa-0.29□□□□□ -2.46
CHMP2B-202ENST00000466696 TNXBP22105 4242 aa-0.29□□□□□ -2.46
CHMP2B-202ENST00000466696 KTN1Q86UP2 1357 aaKnown RBP-0.29□□□□□ -2.46
CHMP2B-202ENST00000466696 PRDM2Q13029 1718 aa-0.29□□□□□ -2.46
CHMP2B-202ENST00000466696 TRAPPC2P0DI81 140 aa-0.29□□□□□ -2.46
CHMP2B-202ENST00000466696 TRAPPC2BP0DI82 140 aa-0.29□□□□□ -2.46
CHMP2B-202ENST00000466696 DEFB135Q30KP9 77 aa-0.29□□□□□ -2.46
CHMP2B-202ENST00000466696 CCDC58Q4VC31 144 aa-0.29□□□□□ -2.46
CHMP2B-202ENST00000466696 MEIG1Q5JSS6 88 aa-0.29□□□□□ -2.46
CHMP2B-202ENST00000466696 DEFB123Q8N688 67 aa-0.29□□□□□ -2.46
CHMP2B-202ENST00000466696 TSLPQ969D9 159 aa-0.29□□□□□ -2.46
CHMP2B-202ENST00000466696 TSC22D3Q99576 134 aa-0.29□□□□□ -2.46
CHMP2B-202ENST00000466696 ARL2-SNX15V9GYD0 113 aa-0.29□□□□□ -2.46
CHMP2B-202ENST00000466696 CDK5RAP2Q96SN8 1893 aa-0.29□□□□□ -2.46
CHMP2B-202ENST00000466696 SPEF2Q9C093 1822 aa-0.29□□□□□ -2.46
CHMP2B-202ENST00000466696 CPSF1Q10570 1443 aaKnown RBP-0.3□□□□□ -2.46
CHMP2B-202ENST00000466696 ARAP2Q8WZ64 1704 aa-0.3□□□□□ -2.46
CHMP2B-202ENST00000466696 KIF21AQ7Z4S6 1674 aa-0.3□□□□□ -2.46
CHMP2B-202ENST00000466696 A0A1B0GWA3 101 aa-0.3□□□□□ -2.46
CHMP2B-202ENST00000466696 CPSF4LA6NMK7 179 aaKnown RBP-0.3□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms