RNA–Protein interactions for RNA: ENST00000466541.1

SHROOM3-202, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 628 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-202ENST00000466541 GAGE12HA6NDE8 117 aa7.93□□□□□ -1.14
SHROOM3-202ENST00000466541 USP17L23D6RBM5 183 aa7.93□□□□□ -1.14
SHROOM3-202ENST00000466541 ZNF25P17030 456 aaPredicted RBP7.93□□□□□ -1.14
SHROOM3-202ENST00000466541 RPL32P62910 135 aaKnown RBP7.93□□□□□ -1.14
SHROOM3-202ENST00000466541 CDPF1Q6NVV7 123 aa7.93□□□□□ -1.14
SHROOM3-202ENST00000466541 TMEM18Q96B42 140 aa7.93□□□□□ -1.14
SHROOM3-202ENST00000466541 DYNC1H1Q14204 4646 aaKnown RBP7.92□□□□□ -1.14
SHROOM3-202ENST00000466541 GCSHP23434 173 aa7.92□□□□□ -1.14
SHROOM3-202ENST00000466541 SMAGPQ0VAQ4 97 aa7.92□□□□□ -1.14
SHROOM3-202ENST00000466541 FABP9Q0Z7S8 132 aa7.92□□□□□ -1.14
SHROOM3-202ENST00000466541 ZNF664Q8N3J9 261 aa7.92□□□□□ -1.14
SHROOM3-202ENST00000466541 LAMTOR2Q9Y2Q5 125 aa7.92□□□□□ -1.14
SHROOM3-202ENST00000466541 KIAA1109Q2LD37 5005 aa7.92□□□□□ -1.14
SHROOM3-202ENST00000466541 XCL1P47992 114 aa7.91□□□□□ -1.14
SHROOM3-202ENST00000466541 KRTAP10-1P60331 282 aa7.91□□□□□ -1.14
SHROOM3-202ENST00000466541 LINC01620Q4KN68 170 aa7.91□□□□□ -1.14
SHROOM3-202ENST00000466541 KRTAP26-1Q6PEX3 210 aa7.91□□□□□ -1.14
SHROOM3-202ENST00000466541 MRPL52Q86TS9 123 aaKnown RBP7.91□□□□□ -1.14
SHROOM3-202ENST00000466541 Q8N8P6 123 aa7.91□□□□□ -1.14
SHROOM3-202ENST00000466541 NTN5Q8WTR8 489 aaPredicted RBP7.91□□□□□ -1.14
SHROOM3-202ENST00000466541 CHCHD10Q8WYQ3 142 aaPredicted RBP7.91□□□□□ -1.14
SHROOM3-202ENST00000466541 GNB1LQ9BYB4 327 aa7.91□□□□□ -1.14
SHROOM3-202ENST00000466541 MRPL18Q9H0U6 180 aaKnown RBP7.91□□□□□ -1.14
SHROOM3-202ENST00000466541 CDC42SE2Q9NRR3 84 aa7.91□□□□□ -1.14
SHROOM3-202ENST00000466541 UBE2D4Q9Y2X8 147 aa7.91□□□□□ -1.14
SHROOM3-202ENST00000466541 LINC00959A0A1B0GUT2 108 aa7.9□□□□□ -1.14
SHROOM3-202ENST00000466541 CCL25O15444 150 aa7.9□□□□□ -1.14
SHROOM3-202ENST00000466541 IFI27P40305 119 aaPredicted RBP7.9□□□□□ -1.14
SHROOM3-202ENST00000466541 SS18Q15532 418 aa7.9□□□□□ -1.14
SHROOM3-202ENST00000466541 C14orf177Q52M58 125 aa7.9□□□□□ -1.14
SHROOM3-202ENST00000466541 Q6ZUT4 128 aa7.9□□□□□ -1.14
SHROOM3-202ENST00000466541 OPRPNQ99935 248 aaPredicted RBP7.9□□□□□ -1.14
SHROOM3-202ENST00000466541 DNAH5Q8TE73 4624 aa7.9□□□□□ -1.15
SHROOM3-202ENST00000466541 TRAV13-1A0A0B4J241 112 aa7.89□□□□□ -1.15
SHROOM3-202ENST00000466541 hDV102S1A0JD36 115 aa7.89□□□□□ -1.15
SHROOM3-202ENST00000466541 COX19Q49B96 90 aa7.89□□□□□ -1.15
SHROOM3-202ENST00000466541 TRAPPC1Q9Y5R8 145 aa7.89□□□□□ -1.15
SHROOM3-202ENST00000466541 PRSS1P07477 247 aa7.88□□□□□ -1.15
SHROOM3-202ENST00000466541 HAMPP81172 84 aa7.88□□□□□ -1.15
SHROOM3-202ENST00000466541 PRSS3P2Q8NHM4 247 aa7.88□□□□□ -1.15
SHROOM3-202ENST00000466541 PRSS47A8MTI9 375 aa7.87□□□□□ -1.15
SHROOM3-202ENST00000466541 MT-ND6P03923 174 aa7.87□□□□□ -1.15
SHROOM3-202ENST00000466541 HIGD2BQ4VC39 106 aa7.87□□□□□ -1.15
SHROOM3-202ENST00000466541 CBLN2Q8IUK8 224 aa7.87□□□□□ -1.15
SHROOM3-202ENST00000466541 ALKBH7Q9BT30 221 aaPredicted RBP7.87□□□□□ -1.15
SHROOM3-202ENST00000466541 TIMM21Q9BVV7 248 aa7.87□□□□□ -1.15
SHROOM3-202ENST00000466541 NXT2Q9NPJ8 142 aaKnown RBP7.87□□□□□ -1.15
SHROOM3-202ENST00000466541 CSDC2Q9Y534 153 aaKnown RBP7.87□□□□□ -1.15
SHROOM3-202ENST00000466541 FOXI1Q12951 378 aa7.86□□□□□ -1.15
SHROOM3-202ENST00000466541 ORMDL2Q53FV1 153 aa7.86□□□□□ -1.15
SHROOM3-202ENST00000466541 SPANXA1Q9NS26 97 aa7.86□□□□□ -1.15
SHROOM3-202ENST00000466541 LRP1BQ9NZR2 4599 aa7.86□□□□□ -1.15
SHROOM3-202ENST00000466541 IFITM10A6NMD0 228 aa7.85□□□□□ -1.15
SHROOM3-202ENST00000466541 C1orf196B1AJZ1 125 aa7.85□□□□□ -1.15
SHROOM3-202ENST00000466541 CDK2AP2O75956 126 aa7.85□□□□□ -1.15
SHROOM3-202ENST00000466541 CFAP161Q6P656 301 aa7.85□□□□□ -1.15
SHROOM3-202ENST00000466541 C2orf66Q6UXQ4 117 aa7.85□□□□□ -1.15
SHROOM3-202ENST00000466541 CYSLTR1Q9Y271 337 aa7.85□□□□□ -1.15
SHROOM3-202ENST00000466541 CD164L2Q6UWJ8 174 aa7.84□□□□□ -1.15
SHROOM3-202ENST00000466541 FA2HQ7L5A8 372 aa7.84□□□□□ -1.15
SHROOM3-202ENST00000466541 C15orf56Q8N910 161 aa7.84□□□□□ -1.15
SHROOM3-202ENST00000466541 SMCO4Q9NRQ5 59 aa7.84□□□□□ -1.15
SHROOM3-202ENST00000466541 AP5S1Q9NUS5 200 aa7.84□□□□□ -1.15
SHROOM3-202ENST00000466541 IGLV4-3A0A075B6K6 122 aa7.83□□□□□ -1.16
SHROOM3-202ENST00000466541 MALP21145 153 aa7.83□□□□□ -1.16
SHROOM3-202ENST00000466541 ZC2HC1BQ5TFG8 222 aa7.83□□□□□ -1.16
SHROOM3-202ENST00000466541 C5orf38Q86SI9 138 aa7.83□□□□□ -1.16
SHROOM3-202ENST00000466541 FAM104AQ969W3 186 aa7.83□□□□□ -1.16
SHROOM3-202ENST00000466541 LINC00526Q96FQ7 95 aa7.83□□□□□ -1.16
SHROOM3-202ENST00000466541 TMEM141Q96I45 108 aa7.83□□□□□ -1.16
SHROOM3-202ENST00000466541 FAM30AQ9NZY2 134 aa7.83□□□□□ -1.16
SHROOM3-202ENST00000466541 RYR1P21817 5038 aa7.83□□□□□ -1.16
SHROOM3-202ENST00000466541 COX7A2LO14548 114 aa7.82□□□□□ -1.16
SHROOM3-202ENST00000466541 MRPS36P82909 103 aaKnown RBP7.82□□□□□ -1.16
SHROOM3-202ENST00000466541 KRTAP17-1Q9BYP8 105 aa7.82□□□□□ -1.16
SHROOM3-202ENST00000466541 HERC2O95714 4834 aa7.81□□□□□ -1.16
SHROOM3-202ENST00000466541 K7EMI3 77 aa7.81□□□□□ -1.16
SHROOM3-202ENST00000466541 XGP55808 180 aa7.81□□□□□ -1.16
SHROOM3-202ENST00000466541 Q6ZN92 141 aa7.81□□□□□ -1.16
SHROOM3-202ENST00000466541 TEX43Q6ZNM6 134 aa7.81□□□□□ -1.16
SHROOM3-202ENST00000466541 YPEL4Q96NS1 127 aa7.81□□□□□ -1.16
SHROOM3-202ENST00000466541 SCGB3A1Q96QR1 104 aa7.81□□□□□ -1.16
SHROOM3-202ENST00000466541 VCX2Q9H322 139 aa7.81□□□□□ -1.16
SHROOM3-202ENST00000466541 PYGO1Q9Y3Y4 419 aa7.81□□□□□ -1.16
SHROOM3-202ENST00000466541 IGHV1-58A0A0C4DH39 117 aa7.8□□□□□ -1.16
SHROOM3-202ENST00000466541 SMR3BP02814 79 aaPredicted RBP7.8□□□□□ -1.16
SHROOM3-202ENST00000466541 SLPIP03973 132 aa7.8□□□□□ -1.16
SHROOM3-202ENST00000466541 G0S2P27469 103 aa7.8□□□□□ -1.16
SHROOM3-202ENST00000466541 C2orf88Q9BSF0 95 aa7.8□□□□□ -1.16
SHROOM3-202ENST00000466541 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.79□□□□□ -1.16
SHROOM3-202ENST00000466541 ZNF561-AS1K7EIQ3 104 aa7.79□□□□□ -1.16
SHROOM3-202ENST00000466541 PMCHL1Q16048 86 aa7.79□□□□□ -1.16
SHROOM3-202ENST00000466541 C18orf32Q8TCD1 76 aa7.79□□□□□ -1.16
SHROOM3-202ENST00000466541 TOMM6Q96B49 74 aa7.79□□□□□ -1.16
SHROOM3-202ENST00000466541 APOBP04114 4563 aaKnown RBP7.79□□□□□ -1.16
SHROOM3-202ENST00000466541 GVQW2A0A096LPI5 108 aaPredicted RBP7.78□□□□□ -1.16
SHROOM3-202ENST00000466541 IGIPA6NJ69 53 aa7.78□□□□□ -1.16
SHROOM3-202ENST00000466541 C9orf163Q8N9P6 203 aa7.78□□□□□ -1.16
SHROOM3-202ENST00000466541 DPH3Q96FX2 82 aa7.78□□□□□ -1.16
SHROOM3-202ENST00000466541 IGHV3-64A0A075B6Q5 118 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms