RNA–Protein interactions for RNA: ENST00000466425.1

PSMB4-202, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 665 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-202ENST00000466425 J3QQQ9 107 aa4.74□□□□□ -1.65
PSMB4-202ENST00000466425 K7EQD1 137 aa4.74□□□□□ -1.65
PSMB4-202ENST00000466425 CCL25O15444 150 aa4.74□□□□□ -1.65
PSMB4-202ENST00000466425 MRPS36P82909 103 aaKnown RBP4.74□□□□□ -1.65
PSMB4-202ENST00000466425 SRSF9Q13242 221 aaKnown RBP eCLIP4.74□□□□□ -1.65
PSMB4-202ENST00000466425 C9orf66Q5T8R8 295 aa4.74□□□□□ -1.65
PSMB4-202ENST00000466425 AMMECR1LQ6DCA0 310 aa4.74□□□□□ -1.65
PSMB4-202ENST00000466425 MAPKAPK5-AS1Q8N8E1 139 aa4.74□□□□□ -1.65
PSMB4-202ENST00000466425 AMELXQ99217 191 aa4.74□□□□□ -1.65
PSMB4-202ENST00000466425 SMR3AQ99954 134 aa4.74□□□□□ -1.65
PSMB4-202ENST00000466425 TTTY13Q9BZ97 58 aa4.74□□□□□ -1.65
PSMB4-202ENST00000466425 TRGV2A0A075B6R0 118 aa4.73□□□□□ -1.65
PSMB4-202ENST00000466425 TINCRA0A1B0GVN0 87 aa4.73□□□□□ -1.65
PSMB4-202ENST00000466425 A0A1W2PPM0 123 aa4.73□□□□□ -1.65
PSMB4-202ENST00000466425 TMEM223A0PJW6 202 aa4.73□□□□□ -1.65
PSMB4-202ENST00000466425 SMIM9A6NGZ8 99 aa4.73□□□□□ -1.65
PSMB4-202ENST00000466425 H3BUT2 72 aa4.73□□□□□ -1.65
PSMB4-202ENST00000466425 H7C423 109 aa4.73□□□□□ -1.65
PSMB4-202ENST00000466425 RPL35AP18077 110 aaKnown RBP4.73□□□□□ -1.65
PSMB4-202ENST00000466425 FXYD2P54710 66 aa4.73□□□□□ -1.65
PSMB4-202ENST00000466425 TIRAPP58753 221 aa4.73□□□□□ -1.65
PSMB4-202ENST00000466425 LYRM7Q5U5X0 104 aa4.73□□□□□ -1.65
PSMB4-202ENST00000466425 OVOL2Q9BRP0 275 aa4.73□□□□□ -1.65
PSMB4-202ENST00000466425 CHCHD7Q9BUK0 85 aa4.73□□□□□ -1.65
PSMB4-202ENST00000466425 SPANXB1Q9NS25 103 aaPredicted RBP4.73□□□□□ -1.65
PSMB4-202ENST00000466425 NHP2Q9NX24 153 aaKnown RBP4.73□□□□□ -1.65
PSMB4-202ENST00000466425 COL6A5A8TX70 2615 aa4.72□□□□□ -1.65
PSMB4-202ENST00000466425 A0A1B0GWB2 263 aa4.72□□□□□ -1.65
PSMB4-202ENST00000466425 TRBV6-4A0A1B0GX49 114 aa4.72□□□□□ -1.65
PSMB4-202ENST00000466425 A8MZ25 164 aa4.72□□□□□ -1.65
PSMB4-202ENST00000466425 INAFM1C9JVW0 142 aa4.72□□□□□ -1.65
PSMB4-202ENST00000466425 K7EP13 123 aa4.72□□□□□ -1.65
PSMB4-202ENST00000466425 K7EP34 96 aa4.72□□□□□ -1.65
PSMB4-202ENST00000466425 CRLF1O75462 422 aa4.72□□□□□ -1.65
PSMB4-202ENST00000466425 ZNF22P17026 224 aaPredicted RBP4.72□□□□□ -1.65
PSMB4-202ENST00000466425 C12orf74Q32Q52 190 aa4.72□□□□□ -1.65
PSMB4-202ENST00000466425 KRTAP21-3Q3LHN1 58 aa4.72□□□□□ -1.65
PSMB4-202ENST00000466425 HIST2H2BDQ6DRA6 164 aa4.72□□□□□ -1.65
PSMB4-202ENST00000466425 Q6ZSN1 163 aa4.72□□□□□ -1.65
PSMB4-202ENST00000466425 ZNRF2Q8NHG8 242 aa4.72□□□□□ -1.65
PSMB4-202ENST00000466425 GTSF1LQ9H1H1 148 aa4.72□□□□□ -1.65
PSMB4-202ENST00000466425 GEMIN7Q9H840 131 aaKnown RBP4.72□□□□□ -1.65
PSMB4-202ENST00000466425 NOP10Q9NPE3 64 aaKnown RBP4.72□□□□□ -1.65
PSMB4-202ENST00000466425 UBE2D4Q9Y2X8 147 aa4.72□□□□□ -1.65
PSMB4-202ENST00000466425 CSDC2Q9Y534 153 aaKnown RBP4.72□□□□□ -1.65
PSMB4-202ENST00000466425 SVEP1Q4LDE5 3571 aa4.71□□□□□ -1.65
PSMB4-202ENST00000466425 TRGV4A0A0C4DH28 118 aa4.71□□□□□ -1.66
PSMB4-202ENST00000466425 A0A0J9YXV3 536 aa4.71□□□□□ -1.66
PSMB4-202ENST00000466425 TMEM238C9JI98 176 aa4.71□□□□□ -1.66
PSMB4-202ENST00000466425 PRM2P04554 102 aa4.71□□□□□ -1.66
PSMB4-202ENST00000466425 GIG44P09565 113 aaPredicted RBP4.71□□□□□ -1.66
PSMB4-202ENST00000466425 EMP1P54849 157 aa4.71□□□□□ -1.66
PSMB4-202ENST00000466425 HERVK_113P63121 156 aa4.71□□□□□ -1.66
PSMB4-202ENST00000466425 Q6ZTI0 123 aa4.71□□□□□ -1.66
PSMB4-202ENST00000466425 Q6ZVH6 145 aa4.71□□□□□ -1.66
PSMB4-202ENST00000466425 SLC25A29Q8N8R3 303 aa4.71□□□□□ -1.66
PSMB4-202ENST00000466425 CSNK1G2-AS1Q8NCQ2 148 aa4.71□□□□□ -1.66
PSMB4-202ENST00000466425 DEFB104AQ8WTQ1 72 aa4.71□□□□□ -1.66
PSMB4-202ENST00000466425 PHLDA1Q8WV24 401 aaPredicted RBP4.71□□□□□ -1.66
PSMB4-202ENST00000466425 RAB37Q96AX2 223 aa4.71□□□□□ -1.66
PSMB4-202ENST00000466425 TMEM101Q96IK0 257 aa4.71□□□□□ -1.66
PSMB4-202ENST00000466425 ZNF479Q96JC4 524 aa4.71□□□□□ -1.66
PSMB4-202ENST00000466425 SPCS1Q9Y6A9 102 aa4.71□□□□□ -1.66
PSMB4-202ENST00000466425 ANK3Q12955 4377 aaKnown RBP4.71□□□□□ -1.66
PSMB4-202ENST00000466425 CUBNO60494 3623 aa4.71□□□□□ -1.66
PSMB4-202ENST00000466425 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.7□□□□□ -1.66
PSMB4-202ENST00000466425 IGHV1-58A0A0C4DH39 117 aa4.7□□□□□ -1.66
PSMB4-202ENST00000466425 A0A0J9YY99 117 aa4.7□□□□□ -1.66
PSMB4-202ENST00000466425 GAGE12BA1L429 117 aa4.7□□□□□ -1.66
PSMB4-202ENST00000466425 IGKV2-29A2NJV5 120 aaPredicted RBP4.7□□□□□ -1.66
PSMB4-202ENST00000466425 IGLL5B9A064 214 aa4.7□□□□□ -1.66
PSMB4-202ENST00000466425 UBE2L6O14933 153 aa4.7□□□□□ -1.66
PSMB4-202ENST00000466425 GAGE7O76087 117 aa4.7□□□□□ -1.66
PSMB4-202ENST00000466425 GAGE12FP0CL80 117 aa4.7□□□□□ -1.66
PSMB4-202ENST00000466425 GAGE12GP0CL81 117 aa4.7□□□□□ -1.66
PSMB4-202ENST00000466425 GAGE12IP0CL82 117 aa4.7□□□□□ -1.66
PSMB4-202ENST00000466425 UBE2D3P61077 147 aa4.7□□□□□ -1.66
PSMB4-202ENST00000466425 UBE2D2P62837 147 aa4.7□□□□□ -1.66
PSMB4-202ENST00000466425 RPL24P83731 157 aaKnown RBP4.7□□□□□ -1.66
PSMB4-202ENST00000466425 RNF151Q2KHN1 245 aa4.7□□□□□ -1.66
PSMB4-202ENST00000466425 KIR2DL5BQ8NHK3 375 aa4.7□□□□□ -1.66
PSMB4-202ENST00000466425 COPS9Q8WXC6 57 aa4.7□□□□□ -1.66
PSMB4-202ENST00000466425 OPRPNQ99935 248 aaPredicted RBP4.7□□□□□ -1.66
PSMB4-202ENST00000466425 TMEM243Q9BU79 118 aa4.7□□□□□ -1.66
PSMB4-202ENST00000466425 MUC4Q99102 2169 aa4.7□□□□□ -1.66
PSMB4-202ENST00000466425 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.69□□□□□ -1.66
PSMB4-202ENST00000466425 IGHV3-38A0A0C4DH36 116 aa4.69□□□□□ -1.66
PSMB4-202ENST00000466425 A4D1N5 150 aa4.69□□□□□ -1.66
PSMB4-202ENST00000466425 GAGE12JA6NER3 117 aa4.69□□□□□ -1.66
PSMB4-202ENST00000466425 IGHV3-30-3P0DP02 117 aa4.69□□□□□ -1.66
PSMB4-202ENST00000466425 UBE2D1P51668 147 aa4.69□□□□□ -1.66
PSMB4-202ENST00000466425 APOC4P55056 127 aa4.69□□□□□ -1.66
PSMB4-202ENST00000466425 KRTAP10-3P60369 221 aa4.69□□□□□ -1.66
PSMB4-202ENST00000466425 GAGE4Q13068 117 aa4.69□□□□□ -1.66
PSMB4-202ENST00000466425 GAGE5Q13069 117 aa4.69□□□□□ -1.66
PSMB4-202ENST00000466425 Q6ZUT4 128 aa4.69□□□□□ -1.66
PSMB4-202ENST00000466425 FAM19A3Q7Z5A8 133 aa4.69□□□□□ -1.66
PSMB4-202ENST00000466425 CBY1Q9Y3M2 126 aa4.69□□□□□ -1.66
PSMB4-202ENST00000466425 STAB1Q9NY15 2570 aa4.68□□□□□ -1.66
PSMB4-202ENST00000466425 IGLV5-45A0A087WSX0 123 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 172 ms