RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 TMSB15BA0A087X1C1 80 aa9.31□□□□□ -0.92
CXCR4-203ENST00000466288 LINC00614P0C842 121 aa9.31□□□□□ -0.92
CXCR4-203ENST00000466288 LCE2AQ5TA79 106 aaPredicted RBP9.31□□□□□ -0.92
CXCR4-203ENST00000466288 NIT1Q86X76 327 aa9.31□□□□□ -0.92
CXCR4-203ENST00000466288 GAGE12JA6NER3 117 aa9.3□□□□□ -0.92
CXCR4-203ENST00000466288 GAGE1Q13065 139 aa9.3□□□□□ -0.92
CXCR4-203ENST00000466288 GAGE4Q13068 117 aa9.3□□□□□ -0.92
CXCR4-203ENST00000466288 GAGE5Q13069 117 aa9.3□□□□□ -0.92
CXCR4-203ENST00000466288 GAGE13Q4V321 117 aa9.3□□□□□ -0.92
CXCR4-203ENST00000466288 Q9UF83 564 aa9.3□□□□□ -0.92
CXCR4-203ENST00000466288 C11orf21Q9P2W6 132 aa9.29□□□□□ -0.92
CXCR4-203ENST00000466288 KLK12Q9UKR0 248 aa9.29□□□□□ -0.92
CXCR4-203ENST00000466288 TSTD3H0UI37 97 aa9.28□□□□□ -0.92
CXCR4-203ENST00000466288 PKIAP61925 76 aa9.28□□□□□ -0.92
CXCR4-203ENST00000466288 PTH2Q96A98 100 aa9.28□□□□□ -0.92
CXCR4-203ENST00000466288 UBE2WQ96B02 151 aa9.28□□□□□ -0.92
CXCR4-203ENST00000466288 C9orf85Q96MD7 179 aa9.28□□□□□ -0.92
CXCR4-203ENST00000466288 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.28□□□□□ -0.92
CXCR4-203ENST00000466288 SCGB1D1O95968 90 aa9.28□□□□□ -0.92
CXCR4-203ENST00000466288 CKS2P33552 79 aa9.28□□□□□ -0.92
CXCR4-203ENST00000466288 MRPL51Q4U2R6 128 aaKnown RBP9.28□□□□□ -0.92
CXCR4-203ENST00000466288 C14orf177Q52M58 125 aa9.28□□□□□ -0.92
CXCR4-203ENST00000466288 RNASEKQ6P5S7 137 aaKnown RBP9.28□□□□□ -0.92
CXCR4-203ENST00000466288 PRELID3AQ96N28 172 aa9.28□□□□□ -0.92
CXCR4-203ENST00000466288 PANO1I0J062 215 aa9.27□□□□□ -0.93
CXCR4-203ENST00000466288 S100A4P26447 101 aaKnown RBP9.27□□□□□ -0.93
CXCR4-203ENST00000466288 SPANXN1Q5VSR9 72 aa9.27□□□□□ -0.93
CXCR4-203ENST00000466288 AMN1Q8IY45 258 aa9.27□□□□□ -0.93
CXCR4-203ENST00000466288 PRSS3P2Q8NHM4 247 aa9.27□□□□□ -0.93
CXCR4-203ENST00000466288 AP5S1Q9NUS5 200 aa9.27□□□□□ -0.93
CXCR4-203ENST00000466288 HSPB8Q9UJY1 196 aa9.27□□□□□ -0.93
CXCR4-203ENST00000466288 PRSS47A8MTI9 375 aa9.26□□□□□ -0.93
CXCR4-203ENST00000466288 PPP1R17O96001 155 aa9.26□□□□□ -0.93
CXCR4-203ENST00000466288 PMCHL1Q16048 86 aa9.26□□□□□ -0.93
CXCR4-203ENST00000466288 FA2HQ7L5A8 372 aa9.26□□□□□ -0.93
CXCR4-203ENST00000466288 MRAP2Q96G30 205 aa9.26□□□□□ -0.93
CXCR4-203ENST00000466288 LINC01546A6NGU7 62 aa9.25□□□□□ -0.93
CXCR4-203ENST00000466288 PCP4L1A6NKN8 68 aa9.25□□□□□ -0.93
CXCR4-203ENST00000466288 D6R8Y8 96 aa9.25□□□□□ -0.93
CXCR4-203ENST00000466288 ZFP2Q6ZN57 461 aa9.25□□□□□ -0.93
CXCR4-203ENST00000466288 RNF185Q96GF1 192 aa9.25□□□□□ -0.93
CXCR4-203ENST00000466288 NXT2Q9NPJ8 142 aaKnown RBP9.25□□□□□ -0.93
CXCR4-203ENST00000466288 LPAP08519 4548 aa9.25□□□□□ -0.93
CXCR4-203ENST00000466288 RNASE3P12724 160 aaKnown RBP9.24□□□□□ -0.93
CXCR4-203ENST00000466288 ODF1Q14990 250 aa9.24□□□□□ -0.93
CXCR4-203ENST00000466288 TEX43Q6ZNM6 134 aa9.24□□□□□ -0.93
CXCR4-203ENST00000466288 C9orf163Q8N9P6 203 aa9.24□□□□□ -0.93
CXCR4-203ENST00000466288 OR10AG1Q8NH19 301 aa9.24□□□□□ -0.93
CXCR4-203ENST00000466288 URB1-AS1Q96HZ7 61 aa9.24□□□□□ -0.93
CXCR4-203ENST00000466288 MAP1LC3AQ9H492 121 aa9.24□□□□□ -0.93
CXCR4-203ENST00000466288 PHLDA3Q9Y5J5 127 aa9.24□□□□□ -0.93
CXCR4-203ENST00000466288 K7EMI3 77 aa9.23□□□□□ -0.93
CXCR4-203ENST00000466288 LEPROTL1O95214 131 aa9.23□□□□□ -0.93
CXCR4-203ENST00000466288 KRTDAPP60985 99 aa9.23□□□□□ -0.93
CXCR4-203ENST00000466288 C4orf48Q5BLP8 95 aa9.23□□□□□ -0.93
CXCR4-203ENST00000466288 C14orf178Q8N769 122 aaPredicted RBP9.23□□□□□ -0.93
CXCR4-203ENST00000466288 CHCHD7Q9BUK0 85 aa9.23□□□□□ -0.93
CXCR4-203ENST00000466288 A0A087WX48 190 aa9.22□□□□□ -0.93
CXCR4-203ENST00000466288 IGHV1-24A0A0C4DH33 117 aa9.22□□□□□ -0.93
CXCR4-203ENST00000466288 C20orf202A1L168 122 aa9.22□□□□□ -0.93
CXCR4-203ENST00000466288 H3BVH4 76 aa9.22□□□□□ -0.93
CXCR4-203ENST00000466288 M0R381 172 aa9.22□□□□□ -0.93
CXCR4-203ENST00000466288 C3orf79P0CE67 100 aa9.22□□□□□ -0.93
CXCR4-203ENST00000466288 DGAT2L7PQ6IED9 249 aa9.22□□□□□ -0.93
CXCR4-203ENST00000466288 UFSP1Q6NVU6 142 aa9.22□□□□□ -0.93
CXCR4-203ENST00000466288 FAM19A2Q8N3H0 131 aa9.22□□□□□ -0.93
CXCR4-203ENST00000466288 AP1S3Q96PC3 154 aa9.22□□□□□ -0.93
CXCR4-203ENST00000466288 C1orf43Q9BWL3 253 aa9.22□□□□□ -0.93
CXCR4-203ENST00000466288 DPH3P1Q9H4G8 78 aa9.22□□□□□ -0.93
CXCR4-203ENST00000466288 A8MWV9 139 aa9.21□□□□□ -0.93
CXCR4-203ENST00000466288 USP17L23D6RBM5 183 aa9.21□□□□□ -0.93
CXCR4-203ENST00000466288 PRSS1P07477 247 aa9.21□□□□□ -0.93
CXCR4-203ENST00000466288 PIK3CD-AS1Q5SR53 167 aa9.21□□□□□ -0.93
CXCR4-203ENST00000466288 ENHOQ6UWT2 76 aa9.21□□□□□ -0.93
CXCR4-203ENST00000466288 SDIM1Q6ZPB5 146 aa9.21□□□□□ -0.93
CXCR4-203ENST00000466288 TNFRSF6BO95407 300 aa9.21□□□□□ -0.94
CXCR4-203ENST00000466288 LCE2CQ5TA81 110 aa9.21□□□□□ -0.94
CXCR4-203ENST00000466288 PET117Q6UWS5 81 aa9.21□□□□□ -0.94
CXCR4-203ENST00000466288 C20orf78Q9BR46 151 aa9.21□□□□□ -0.94
CXCR4-203ENST00000466288 MAP1LC3CQ9BXW4 147 aa9.21□□□□□ -0.94
CXCR4-203ENST00000466288 GAS8-AS1O95177 125 aa9.2□□□□□ -0.94
CXCR4-203ENST00000466288 CIRBPQ14011 172 aaKnown RBP9.2□□□□□ -0.94
CXCR4-203ENST00000466288 ZNF664Q8N3J9 261 aa9.2□□□□□ -0.94
CXCR4-203ENST00000466288 LINC01600Q96MT4 127 aa9.2□□□□□ -0.94
CXCR4-203ENST00000466288 VAMP8Q9BV40 100 aa9.2□□□□□ -0.94
CXCR4-203ENST00000466288 JPT2Q9H910 190 aa9.2□□□□□ -0.94
CXCR4-203ENST00000466288 MUC21A0A0G2JKD1 596 aa9.19□□□□□ -0.94
CXCR4-203ENST00000466288 MUC21A0A140T8X8 626 aa9.19□□□□□ -0.94
CXCR4-203ENST00000466288 LINC01549A6NIU2 74 aa9.19□□□□□ -0.94
CXCR4-203ENST00000466288 NPYP01303 97 aa9.19□□□□□ -0.94
CXCR4-203ENST00000466288 IFI27P40305 119 aaPredicted RBP9.19□□□□□ -0.94
CXCR4-203ENST00000466288 RPL32P62910 135 aaKnown RBP9.19□□□□□ -0.94
CXCR4-203ENST00000466288 Q8N8P6 123 aa9.19□□□□□ -0.94
CXCR4-203ENST00000466288 HBDP02042 147 aa9.18□□□□□ -0.94
CXCR4-203ENST00000466288 SMIM17P0DL12 118 aa9.18□□□□□ -0.94
CXCR4-203ENST00000466288 G0S2P27469 103 aa9.18□□□□□ -0.94
CXCR4-203ENST00000466288 SYS1-DBNDD2H3BUS1 97 aa9.17□□□□□ -0.94
CXCR4-203ENST00000466288 DDTP30046 118 aa9.17□□□□□ -0.94
CXCR4-203ENST00000466288 SSTP61278 116 aa9.17□□□□□ -0.94
CXCR4-203ENST00000466288 MUC2Q02817 5179 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms