RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 IGIPA6NJ69 53 aa7.52□□□□□ -1.21
VCP-204ENST00000466100 TMEM262E9PQX1 116 aa7.52□□□□□ -1.21
VCP-204ENST00000466100 HSBP1O75506 76 aa7.52□□□□□ -1.21
VCP-204ENST00000466100 HBDP02042 147 aa7.52□□□□□ -1.21
VCP-204ENST00000466100 PDZD11Q5EBL8 140 aa7.52□□□□□ -1.21
VCP-204ENST00000466100 Q6ZR54 194 aa7.52□□□□□ -1.21
VCP-204ENST00000466100 Q6ZUT4 128 aa7.52□□□□□ -1.21
VCP-204ENST00000466100 HECTD4Q9Y4D8 3996 aa7.51□□□□□ -1.21
VCP-204ENST00000466100 IGLV4-3A0A075B6K6 122 aa7.51□□□□□ -1.21
VCP-204ENST00000466100 K7EP13 123 aa7.51□□□□□ -1.21
VCP-204ENST00000466100 G0S2P27469 103 aa7.51□□□□□ -1.21
VCP-204ENST00000466100 NDUFA6P56556 154 aa7.51□□□□□ -1.21
VCP-204ENST00000466100 MRPS36P82909 103 aaKnown RBP7.51□□□□□ -1.21
VCP-204ENST00000466100 SMAGPQ0VAQ4 97 aa7.51□□□□□ -1.21
VCP-204ENST00000466100 AMMECR1LQ6DCA0 310 aa7.51□□□□□ -1.21
VCP-204ENST00000466100 FAM19A2Q8N3H0 131 aa7.51□□□□□ -1.21
VCP-204ENST00000466100 TIMM17AQ99595 171 aa7.51□□□□□ -1.21
VCP-204ENST00000466100 CDC42SE2Q9NRR3 84 aa7.51□□□□□ -1.21
VCP-204ENST00000466100 PRR34Q9NV39 138 aa7.51□□□□□ -1.21
VCP-204ENST00000466100 LINC01549A6NIU2 74 aa7.5□□□□□ -1.21
VCP-204ENST00000466100 IBA57-AS1B1ANH7 110 aa7.5□□□□□ -1.21
VCP-204ENST00000466100 ANGP03950 147 aaKnown RBP7.5□□□□□ -1.21
VCP-204ENST00000466100 NPSP0C0P6 89 aa7.5□□□□□ -1.21
VCP-204ENST00000466100 TTC32Q5I0X7 151 aa7.5□□□□□ -1.21
VCP-204ENST00000466100 LINC00173Q6ZV60 143 aa7.5□□□□□ -1.21
VCP-204ENST00000466100 ERASQ7Z444 233 aa7.5□□□□□ -1.21
VCP-204ENST00000466100 C10orf126Q8N4M7 172 aa7.5□□□□□ -1.21
VCP-204ENST00000466100 OR5A1Q8NGJ0 315 aa7.5□□□□□ -1.21
VCP-204ENST00000466100 OPRPNQ99935 248 aaPredicted RBP7.5□□□□□ -1.21
VCP-204ENST00000466100 KLK12Q9UKR0 248 aa7.5□□□□□ -1.21
VCP-204ENST00000466100 ENHOQ6UWT2 76 aa7.49□□□□□ -1.21
VCP-204ENST00000466100 LINC00269Q8N2A0 174 aa7.49□□□□□ -1.21
VCP-204ENST00000466100 ZNF664Q8N3J9 261 aa7.49□□□□□ -1.21
VCP-204ENST00000466100 TMEM101Q96IK0 257 aa7.49□□□□□ -1.21
VCP-204ENST00000466100 PKD1P98161 4303 aa7.49□□□□□ -1.21
VCP-204ENST00000466100 TRAV9-2A0A087WT02 112 aa7.48□□□□□ -1.21
VCP-204ENST00000466100 RNASE13Q5GAN3 156 aaKnown RBP7.48□□□□□ -1.21
VCP-204ENST00000466100 DGAT2L7PQ6IED9 249 aa7.48□□□□□ -1.21
VCP-204ENST00000466100 TMEM141Q96I45 108 aa7.48□□□□□ -1.21
VCP-204ENST00000466100 SCGB3A1Q96QR1 104 aa7.48□□□□□ -1.21
VCP-204ENST00000466100 AMELXQ99217 191 aa7.48□□□□□ -1.21
VCP-204ENST00000466100 REG3AQ06141 175 aa7.47□□□□□ -1.21
VCP-204ENST00000466100 ZC2HC1BQ5TFG8 222 aa7.47□□□□□ -1.21
VCP-204ENST00000466100 CLPSL2Q6UWE3 100 aa7.47□□□□□ -1.21
VCP-204ENST00000466100 UBE2WQ96B02 151 aa7.47□□□□□ -1.21
VCP-204ENST00000466100 M0R2N4 97 aa7.46□□□□□ -1.22
VCP-204ENST00000466100 HIST3H2BBQ8N257 126 aa7.46□□□□□ -1.22
VCP-204ENST00000466100 BAALCQ8WXS3 180 aa7.46□□□□□ -1.22
VCP-204ENST00000466100 DNAH5Q8TE73 4624 aa7.45□□□□□ -1.22
VCP-204ENST00000466100 C5orf52A6NGY3 159 aa7.45□□□□□ -1.22
VCP-204ENST00000466100 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.45□□□□□ -1.22
VCP-204ENST00000466100 ATP5LO75964 103 aa7.45□□□□□ -1.22
VCP-204ENST00000466100 LEPROTL1O95214 131 aa7.45□□□□□ -1.22
VCP-204ENST00000466100 MIAQ16674 131 aa7.45□□□□□ -1.22
VCP-204ENST00000466100 KRTAP26-1Q6PEX3 210 aa7.45□□□□□ -1.22
VCP-204ENST00000466100 Q6ZRN7 208 aaPredicted RBP7.45□□□□□ -1.22
VCP-204ENST00000466100 IFI27L1Q96BM0 104 aa7.45□□□□□ -1.22
VCP-204ENST00000466100 PACRGQ96M98 296 aaPredicted RBP7.45□□□□□ -1.22
VCP-204ENST00000466100 TRAV8-3A0A0A6YYJ7 113 aa7.44□□□□□ -1.22
VCP-204ENST00000466100 LINC00959A0A1B0GUT2 108 aa7.44□□□□□ -1.22
VCP-204ENST00000466100 IFITM10A6NMD0 228 aa7.44□□□□□ -1.22
VCP-204ENST00000466100 CRPP02741 224 aa7.44□□□□□ -1.22
VCP-204ENST00000466100 S100A6P06703 90 aa7.44□□□□□ -1.22
VCP-204ENST00000466100 UBE2D1P51668 147 aa7.44□□□□□ -1.22
VCP-204ENST00000466100 SNRPEP62304 92 aaKnown RBP7.44□□□□□ -1.22
VCP-204ENST00000466100 Q6ZN92 141 aa7.44□□□□□ -1.22
VCP-204ENST00000466100 TEX43Q6ZNM6 134 aa7.44□□□□□ -1.22
VCP-204ENST00000466100 VCX2Q9H322 139 aa7.44□□□□□ -1.22
VCP-204ENST00000466100 Q9HAA7 133 aa7.44□□□□□ -1.22
VCP-204ENST00000466100 TRAV8-4A0A0B4J246 113 aa7.43□□□□□ -1.22
VCP-204ENST00000466100 IGKV3OR2-268A0A0C4DH90 116 aa7.43□□□□□ -1.22
VCP-204ENST00000466100 FABP4P15090 132 aa7.43□□□□□ -1.22
VCP-204ENST00000466100 PMVKQ15126 192 aa7.43□□□□□ -1.22
VCP-204ENST00000466100 PAPPA-AS1Q5QFB9 102 aa7.43□□□□□ -1.22
VCP-204ENST00000466100 FAM19A3Q7Z5A8 133 aa7.43□□□□□ -1.22
VCP-204ENST00000466100 CST9LQ9H4G1 147 aa7.43□□□□□ -1.22
VCP-204ENST00000466100 HSPB8Q9UJY1 196 aa7.43□□□□□ -1.22
VCP-204ENST00000466100 TMA7Q9Y2S6 64 aaKnown RBP7.43□□□□□ -1.22
VCP-204ENST00000466100 PKHD1P08F94 4074 aa7.42□□□□□ -1.22
VCP-204ENST00000466100 IGLV10-54A0A075B6I4 117 aa7.42□□□□□ -1.22
VCP-204ENST00000466100 TRAV13-1A0A0B4J241 112 aa7.42□□□□□ -1.22
VCP-204ENST00000466100 CCL25O15444 150 aa7.42□□□□□ -1.22
VCP-204ENST00000466100 C6orf223Q8N319 242 aa7.42□□□□□ -1.22
VCP-204ENST00000466100 CHCHD10Q8WYQ3 142 aaPredicted RBP7.42□□□□□ -1.22
VCP-204ENST00000466100 HIST1H2BLQ99880 126 aa7.42□□□□□ -1.22
VCP-204ENST00000466100 C2orf88Q9BSF0 95 aa7.42□□□□□ -1.22
VCP-204ENST00000466100 TRAV12-1A0A0B4J245 112 aa7.41□□□□□ -1.22
VCP-204ENST00000466100 PRSS29PA6NIE9 313 aa7.41□□□□□ -1.22
VCP-204ENST00000466100 LINC00242Q5T6M2 205 aa7.41□□□□□ -1.22
VCP-204ENST00000466100 NFE4Q86UQ8 179 aa7.41□□□□□ -1.22
VCP-204ENST00000466100 C1orf43Q9BWL3 253 aa7.41□□□□□ -1.22
VCP-204ENST00000466100 IGLV4-69A0A075B6H9 119 aa7.4□□□□□ -1.22
VCP-204ENST00000466100 IGKV2D-24A0A075B6R9 120 aa7.4□□□□□ -1.22
VCP-204ENST00000466100 RTL8CO15255 209 aa7.4□□□□□ -1.22
VCP-204ENST00000466100 FOXI1Q12951 378 aa7.4□□□□□ -1.22
VCP-204ENST00000466100 ODF1Q14990 250 aa7.4□□□□□ -1.22
VCP-204ENST00000466100 SS18Q15532 418 aa7.4□□□□□ -1.22
VCP-204ENST00000466100 C1orf134Q5TEV5 83 aa7.4□□□□□ -1.22
VCP-204ENST00000466100 SPATA12Q7Z6I5 190 aa7.4□□□□□ -1.22
VCP-204ENST00000466100 MAPKAPK5-AS1Q8N8E1 139 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms