RNA–Protein interactions for RNA: ENST00000465743.2

COL2A1-203, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 4

Gene COL2A1, Length 546 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-203ENST00000465743 COX11Q9Y6N1 276 aa13.24□□□□□ -0.29
COL2A1-203ENST00000465743 MYCBP2O75592 4640 aa13.24□□□□□ -0.29
COL2A1-203ENST00000465743 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.23□□□□□ -0.29
COL2A1-203ENST00000465743 IGKV2-29A2NJV5 120 aaPredicted RBP13.23□□□□□ -0.29
COL2A1-203ENST00000465743 TCAPO15273 167 aa13.23□□□□□ -0.29
COL2A1-203ENST00000465743 AMMECR1LQ6DCA0 310 aa13.23□□□□□ -0.29
COL2A1-203ENST00000465743 SMIM2Q9BVW6 85 aa13.23□□□□□ -0.29
COL2A1-203ENST00000465743 HLA-DQA1P01909 254 aa13.22□□□□□ -0.29
COL2A1-203ENST00000465743 ESDP10768 282 aa13.22□□□□□ -0.29
COL2A1-203ENST00000465743 COX19Q49B96 90 aa13.22□□□□□ -0.29
COL2A1-203ENST00000465743 LINC00269Q8N2A0 174 aa13.22□□□□□ -0.29
COL2A1-203ENST00000465743 MIAQ16674 131 aa13.21□□□□□ -0.29
COL2A1-203ENST00000465743 C20orf203Q8NBC4 194 aa13.21□□□□□ -0.29
COL2A1-203ENST00000465743 GNB1LQ9BYB4 327 aa13.21□□□□□ -0.29
COL2A1-203ENST00000465743 PRR34Q9NV39 138 aa13.21□□□□□ -0.29
COL2A1-203ENST00000465743 SRRM2Q9UQ35 2752 aaKnown RBP13.2□□□□□ -0.3
COL2A1-203ENST00000465743 IGLV4-60A0A075B6I1 120 aa13.2□□□□□ -0.3
COL2A1-203ENST00000465743 FGF6P10767 208 aa13.2□□□□□ -0.3
COL2A1-203ENST00000465743 RNASEKQ6P5S7 137 aaKnown RBP13.2□□□□□ -0.3
COL2A1-203ENST00000465743 C1orf43Q9BWL3 253 aa13.2□□□□□ -0.3
COL2A1-203ENST00000465743 ZNF25P17030 456 aaPredicted RBP13.19□□□□□ -0.3
COL2A1-203ENST00000465743 MAP1LC3AQ9H492 121 aa13.19□□□□□ -0.3
COL2A1-203ENST00000465743 HERC1Q15751 4861 aa13.18□□□□□ -0.3
COL2A1-203ENST00000465743 MT-ND6P03923 174 aa13.18□□□□□ -0.3
COL2A1-203ENST00000465743 INAFM2P0DMQ5 153 aa13.18□□□□□ -0.3
COL2A1-203ENST00000465743 REG3AQ06141 175 aa13.18□□□□□ -0.3
COL2A1-203ENST00000465743 Q6ZSA8 131 aa13.18□□□□□ -0.3
COL2A1-203ENST00000465743 TMEM101Q96IK0 257 aa13.18□□□□□ -0.3
COL2A1-203ENST00000465743 FLG2Q5D862 2391 aaPredicted RBP13.18□□□□□ -0.3
COL2A1-203ENST00000465743 SMAGPQ0VAQ4 97 aa13.17□□□□□ -0.3
COL2A1-203ENST00000465743 PRSS47A8MTI9 375 aa13.16□□□□□ -0.3
COL2A1-203ENST00000465743 RAB5AP20339 215 aa13.16□□□□□ -0.3
COL2A1-203ENST00000465743 MRPL52Q86TS9 123 aaKnown RBP13.16□□□□□ -0.3
COL2A1-203ENST00000465743 OR5A1Q8NGJ0 315 aa13.16□□□□□ -0.3
COL2A1-203ENST00000465743 TMEM18Q96B42 140 aa13.16□□□□□ -0.3
COL2A1-203ENST00000465743 TGIF2-C20orf24A0A0A6YYL0 155 aa13.15□□□□□ -0.3
COL2A1-203ENST00000465743 LOC389332A0A1B0GUA5 103 aa13.15□□□□□ -0.3
COL2A1-203ENST00000465743 TRAV8-4A0A0B4J246 113 aa13.14□□□□□ -0.31
COL2A1-203ENST00000465743 USP17L23D6RBM5 183 aa13.14□□□□□ -0.31
COL2A1-203ENST00000465743 KIAA1644Q3SXP7 199 aa13.14□□□□□ -0.31
COL2A1-203ENST00000465743 IGLV10-54A0A075B6I4 117 aa13.13□□□□□ -0.31
COL2A1-203ENST00000465743 DGAT2L7PQ6IED9 249 aa13.13□□□□□ -0.31
COL2A1-203ENST00000465743 KRTAP26-1Q6PEX3 210 aa13.13□□□□□ -0.31
COL2A1-203ENST00000465743 MRPL18Q9H0U6 180 aaKnown RBP13.13□□□□□ -0.31
COL2A1-203ENST00000465743 FABP9Q0Z7S8 132 aa13.12□□□□□ -0.31
COL2A1-203ENST00000465743 SCXQ7RTU7 201 aa13.12□□□□□ -0.31
COL2A1-203ENST00000465743 Q8N8P6 123 aa13.12□□□□□ -0.31
COL2A1-203ENST00000465743 NXT2Q9NPJ8 142 aaKnown RBP13.12□□□□□ -0.31
COL2A1-203ENST00000465743 FAM229AH3BQW9 127 aa13.11□□□□□ -0.31
COL2A1-203ENST00000465743 TIMM21Q9BVV7 248 aa13.11□□□□□ -0.31
COL2A1-203ENST00000465743 SMCO4Q9NRQ5 59 aa13.11□□□□□ -0.31
COL2A1-203ENST00000465743 UBE2D4Q9Y2X8 147 aa13.11□□□□□ -0.31
COL2A1-203ENST00000465743 CSDC2Q9Y534 153 aaKnown RBP13.11□□□□□ -0.31
COL2A1-203ENST00000465743 IGKV3OR2-268A0A0C4DH90 116 aa13.1□□□□□ -0.31
COL2A1-203ENST00000465743 K7EMI3 77 aa13.1□□□□□ -0.31
COL2A1-203ENST00000465743 CDC42SE2Q9NRR3 84 aa13.1□□□□□ -0.31
COL2A1-203ENST00000465743 PRSS1P07477 247 aa13.09□□□□□ -0.31
COL2A1-203ENST00000465743 LINC00528Q8N1L1 170 aa13.09□□□□□ -0.31
COL2A1-203ENST00000465743 ZNF664Q8N3J9 261 aa13.09□□□□□ -0.31
COL2A1-203ENST00000465743 ALKBH7Q9BT30 221 aaPredicted RBP13.09□□□□□ -0.31
COL2A1-203ENST00000465743 TRAPPC1Q9Y5R8 145 aa13.09□□□□□ -0.31
COL2A1-203ENST00000465743 DMBT1Q9UGM3 2413 aaPredicted RBP13.09□□□□□ -0.31
COL2A1-203ENST00000465743 RPL39P62891 51 aaKnown RBP13.08□□□□□ -0.32
COL2A1-203ENST00000465743 CBLN2Q8IUK8 224 aa13.08□□□□□ -0.32
COL2A1-203ENST00000465743 YPEL4Q96NS1 127 aa13.08□□□□□ -0.32
COL2A1-203ENST00000465743 SPANXA1Q9NS26 97 aa13.08□□□□□ -0.32
COL2A1-203ENST00000465743 C14orf177Q52M58 125 aa13.07□□□□□ -0.32
COL2A1-203ENST00000465743 ORMDL2Q53FV1 153 aa13.07□□□□□ -0.32
COL2A1-203ENST00000465743 IFI27P40305 119 aaPredicted RBP13.06□□□□□ -0.32
COL2A1-203ENST00000465743 PRSS3P2Q8NHM4 247 aa13.05□□□□□ -0.32
COL2A1-203ENST00000465743 LINC00959A0A1B0GUT2 108 aa13.04□□□□□ -0.32
COL2A1-203ENST00000465743 Q6ZUT4 128 aa13.04□□□□□ -0.32
COL2A1-203ENST00000465743 CHCHD10Q8WYQ3 142 aaPredicted RBP13.04□□□□□ -0.32
COL2A1-203ENST00000465743 CHAC1Q9BUX1 264 aa13.04□□□□□ -0.32
COL2A1-203ENST00000465743 CYSLTR1Q9Y271 337 aa13.04□□□□□ -0.32
COL2A1-203ENST00000465743 GAGE12HA6NDE8 117 aa13.03□□□□□ -0.32
COL2A1-203ENST00000465743 G0S2P27469 103 aa13.03□□□□□ -0.32
COL2A1-203ENST00000465743 SS18Q15532 418 aa13.03□□□□□ -0.32
COL2A1-203ENST00000465743 CIRBP-AS1Q8TBR5 109 aa13.03□□□□□ -0.32
COL2A1-203ENST00000465743 MRPS36P82909 103 aaKnown RBP13.02□□□□□ -0.33
COL2A1-203ENST00000465743 RNASE13Q5GAN3 156 aaKnown RBP13.02□□□□□ -0.33
COL2A1-203ENST00000465743 C2orf66Q6UXQ4 117 aa13.02□□□□□ -0.33
COL2A1-203ENST00000465743 PYGO1Q9Y3Y4 419 aa13.02□□□□□ -0.33
COL2A1-203ENST00000465743 PKHD1L1Q86WI1 4243 aa13.02□□□□□ -0.33
COL2A1-203ENST00000465743 CCL25O15444 150 aa13.01□□□□□ -0.33
COL2A1-203ENST00000465743 XCL1P47992 114 aa13.01□□□□□ -0.33
COL2A1-203ENST00000465743 C1orf196B1AJZ1 125 aa13□□□□□ -0.33
COL2A1-203ENST00000465743 FA2HQ7L5A8 372 aa13□□□□□ -0.33
COL2A1-203ENST00000465743 TRAV13-1A0A0B4J241 112 aa12.99□□□□□ -0.33
COL2A1-203ENST00000465743 PANO1I0J062 215 aa12.99□□□□□ -0.33
COL2A1-203ENST00000465743 hDV102S1A0JD36 115 aa12.98□□□□□ -0.33
COL2A1-203ENST00000465743 LINC01546A6NGU7 62 aa12.98□□□□□ -0.33
COL2A1-203ENST00000465743 PLA2G1BP04054 148 aaKnown RBP12.98□□□□□ -0.33
COL2A1-203ENST00000465743 OPRPNQ99935 248 aaPredicted RBP12.98□□□□□ -0.33
COL2A1-203ENST00000465743 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.98□□□□□ -0.33
COL2A1-203ENST00000465743 KRTAP10-4P60372 401 aaPredicted RBP12.97□□□□□ -0.33
COL2A1-203ENST00000465743 FOXI1Q12951 378 aa12.97□□□□□ -0.33
COL2A1-203ENST00000465743 CFAP161Q6P656 301 aa12.97□□□□□ -0.33
COL2A1-203ENST00000465743 CD164L2Q6UWJ8 174 aa12.97□□□□□ -0.33
COL2A1-203ENST00000465743 C9orf163Q8N9P6 203 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms