RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 DGAT2L7PQ6IED9 249 aa14.28□□□□□ -0.12
SDF4-205ENST00000465727 Q6ZSN1 163 aa14.28□□□□□ -0.12
SDF4-205ENST00000465727 KNCNA6PVL3 124 aa14.27□□□□□ -0.12
SDF4-205ENST00000465727 SYNJ2BPP57105 145 aa14.27□□□□□ -0.13
SDF4-205ENST00000465727 TMEM95Q3KNT9 176 aa14.27□□□□□ -0.13
SDF4-205ENST00000465727 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.27□□□□□ -0.13
SDF4-205ENST00000465727 Q9UF83 564 aa14.27□□□□□ -0.13
SDF4-205ENST00000465727 C9orf153Q5TBE3 101 aa14.26□□□□□ -0.13
SDF4-205ENST00000465727 BAALC-AS2P0C853 105 aa14.26□□□□□ -0.13
SDF4-205ENST00000465727 C5orf38Q86SI9 138 aa14.25□□□□□ -0.13
SDF4-205ENST00000465727 LINC00526Q96FQ7 95 aa14.25□□□□□ -0.13
SDF4-205ENST00000465727 IGHV3OR16-12A0A075B7B8 117 aa14.24□□□□□ -0.13
SDF4-205ENST00000465727 NDUFA7O95182 113 aa14.24□□□□□ -0.13
SDF4-205ENST00000465727 LINC00242Q5T6M2 205 aa14.24□□□□□ -0.13
SDF4-205ENST00000465727 C10orf105Q8TEF2 133 aa14.24□□□□□ -0.13
SDF4-205ENST00000465727 PF4P02776 101 aa14.24□□□□□ -0.13
SDF4-205ENST00000465727 COX6A2Q02221 97 aa14.24□□□□□ -0.13
SDF4-205ENST00000465727 SOSTDC1Q6X4U4 206 aa14.24□□□□□ -0.13
SDF4-205ENST00000465727 Q8N2B8 174 aa14.24□□□□□ -0.13
SDF4-205ENST00000465727 ZNF843Q8N446 348 aa14.24□□□□□ -0.13
SDF4-205ENST00000465727 SMIM1B2RUZ4 78 aa14.23□□□□□ -0.13
SDF4-205ENST00000465727 MSMBP08118 114 aa14.23□□□□□ -0.13
SDF4-205ENST00000465727 VPREB3Q9UKI3 123 aa14.23□□□□□ -0.13
SDF4-205ENST00000465727 IGHV3-38A0A0C4DH36 116 aa14.22□□□□□ -0.13
SDF4-205ENST00000465727 ZNF625Q96I27 306 aaPredicted RBP14.22□□□□□ -0.13
SDF4-205ENST00000465727 CSDC2Q9Y534 153 aaKnown RBP14.22□□□□□ -0.13
SDF4-205ENST00000465727 PRIMA1Q86XR5 153 aa14.21□□□□□ -0.13
SDF4-205ENST00000465727 RS1O15537 224 aa14.21□□□□□ -0.14
SDF4-205ENST00000465727 OVOL2Q9BRP0 275 aa14.21□□□□□ -0.14
SDF4-205ENST00000465727 AKAP6Q13023 2319 aa14.2□□□□□ -0.14
SDF4-205ENST00000465727 HOXD3P31249 432 aaPredicted RBP14.2□□□□□ -0.14
SDF4-205ENST00000465727 DEFB131AP59861 70 aa14.2□□□□□ -0.14
SDF4-205ENST00000465727 HIST2H2BCQ6DN03 193 aa14.2□□□□□ -0.14
SDF4-205ENST00000465727 HIST2H2BDQ6DRA6 164 aa14.2□□□□□ -0.14
SDF4-205ENST00000465727 C10orf99Q6UWK7 81 aa14.2□□□□□ -0.14
SDF4-205ENST00000465727 C11orf72Q8NBR9 251 aa14.2□□□□□ -0.14
SDF4-205ENST00000465727 C22orf24Q9Y442 160 aa14.2□□□□□ -0.14
SDF4-205ENST00000465727 CELSR1Q9NYQ6 3014 aa14.2□□□□□ -0.14
SDF4-205ENST00000465727 ZNF462Q96JM2 2506 aa14.19□□□□□ -0.14
SDF4-205ENST00000465727 C3orf56Q8N813 242 aa14.19□□□□□ -0.14
SDF4-205ENST00000465727 HIVEP3Q5T1R4 2406 aa14.19□□□□□ -0.14
SDF4-205ENST00000465727 TRAV13-2A0A0B4J235 113 aa14.19□□□□□ -0.14
SDF4-205ENST00000465727 FASNP49327 2511 aaKnown RBP14.19□□□□□ -0.14
SDF4-205ENST00000465727 RBMY1BA6NDE4 496 aaKnown RBP14.18□□□□□ -0.14
SDF4-205ENST00000465727 RBMY1EA6NEQ0 496 aaKnown RBP14.18□□□□□ -0.14
SDF4-205ENST00000465727 RBMY1DP0C7P1 496 aaKnown RBP14.18□□□□□ -0.14
SDF4-205ENST00000465727 SORL1Q92673 2214 aa14.18□□□□□ -0.14
SDF4-205ENST00000465727 A0A0U1RRA0 63 aa14.18□□□□□ -0.14
SDF4-205ENST00000465727 COX7CP15954 63 aa14.18□□□□□ -0.14
SDF4-205ENST00000465727 RPL28P46779 137 aaKnown RBP14.18□□□□□ -0.14
SDF4-205ENST00000465727 UBE2E2Q96LR5 201 aa14.17□□□□□ -0.14
SDF4-205ENST00000465727 MALP21145 153 aa14.16□□□□□ -0.14
SDF4-205ENST00000465727 HIST1H4AP62805 103 aaKnown RBP14.16□□□□□ -0.14
SDF4-205ENST00000465727 FAM218AQ96MZ4 157 aa14.16□□□□□ -0.14
SDF4-205ENST00000465727 ATOX1O00244 68 aa14.16□□□□□ -0.14
SDF4-205ENST00000465727 IGHV4-59P01825 116 aa14.15□□□□□ -0.14
SDF4-205ENST00000465727 PRM2P04554 102 aa14.15□□□□□ -0.14
SDF4-205ENST00000465727 LINC00694P0DN24 101 aa14.15□□□□□ -0.14
SDF4-205ENST00000465727 GAGE2AQ6NT46 116 aa14.15□□□□□ -0.14
SDF4-205ENST00000465727 NRGNQ92686 78 aa14.15□□□□□ -0.14
SDF4-205ENST00000465727 F5H768 121 aa14.14□□□□□ -0.15
SDF4-205ENST00000465727 A0A1B0GX51 115 aa14.14□□□□□ -0.15
SDF4-205ENST00000465727 B4DSR2 109 aa14.14□□□□□ -0.15
SDF4-205ENST00000465727 C19orf84I3L1E1 186 aa14.14□□□□□ -0.15
SDF4-205ENST00000465727 CCL19Q99731 98 aa14.14□□□□□ -0.15
SDF4-205ENST00000465727 INSP01308 110 aa14.13□□□□□ -0.15
SDF4-205ENST00000465727 CRPP02741 224 aa14.13□□□□□ -0.15
SDF4-205ENST00000465727 CRYGAP11844 174 aa14.13□□□□□ -0.15
SDF4-205ENST00000465727 AVPP01185 164 aa14.13□□□□□ -0.15
SDF4-205ENST00000465727 LRRC75A-AS1Q8N1F1 130 aa14.13□□□□□ -0.15
SDF4-205ENST00000465727 GCN1Q92616 2671 aaKnown RBP14.13□□□□□ -0.15
SDF4-205ENST00000465727 IGHV4-30-2A0A087WSY4 118 aa14.12□□□□□ -0.15
SDF4-205ENST00000465727 TRAV13-1A0A0B4J241 112 aa14.12□□□□□ -0.15
SDF4-205ENST00000465727 TRBV10-1A0A0K0K1A3 114 aa14.12□□□□□ -0.15
SDF4-205ENST00000465727 PLA2G2AP14555 144 aa14.12□□□□□ -0.15
SDF4-205ENST00000465727 HELZ2Q9BYK8 2649 aaKnown RBP14.11□□□□□ -0.15
SDF4-205ENST00000465727 RPL36AP83881 106 aaKnown RBP14.11□□□□□ -0.15
SDF4-205ENST00000465727 DEFB112Q30KQ8 113 aa14.11□□□□□ -0.15
SDF4-205ENST00000465727 RPL36ALQ969Q0 106 aaKnown RBP14.11□□□□□ -0.15
SDF4-205ENST00000465727 C2orf48Q96LS8 159 aa14.11□□□□□ -0.15
SDF4-205ENST00000465727 CDC42SE2Q9NRR3 84 aa14.11□□□□□ -0.15
SDF4-205ENST00000465727 DNAL4O96015 105 aa14.1□□□□□ -0.15
SDF4-205ENST00000465727 J3KT08 172 aa14.1□□□□□ -0.15
SDF4-205ENST00000465727 BAHCC1Q9P281 2608 aa14.09□□□□□ -0.15
SDF4-205ENST00000465727 ATP5J2P56134 94 aa14.09□□□□□ -0.15
SDF4-205ENST00000465727 Q9HAA7 133 aa14.08□□□□□ -0.15
SDF4-205ENST00000465727 H0YGX0 51 aa14.08□□□□□ -0.16
SDF4-205ENST00000465727 MAP6D1Q9H9H5 199 aa14.08□□□□□ -0.16
SDF4-205ENST00000465727 OBSCN-AS1Q96MR7 158 aa14.06□□□□□ -0.16
SDF4-205ENST00000465727 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.06□□□□□ -0.163e-7■■■□□ 15.2
SDF4-205ENST00000465727 K7EQD1 137 aa14.06□□□□□ -0.16
SDF4-205ENST00000465727 RPS28P62857 69 aaKnown RBP14.06□□□□□ -0.16
SDF4-205ENST00000465727 RPL18AQ02543 176 aaKnown RBP14.06□□□□□ -0.16
SDF4-205ENST00000465727 Q6JHZ5 121 aa14.06□□□□□ -0.16
SDF4-205ENST00000465727 NTM-AS1Q6ZSK4 140 aa14.06□□□□□ -0.16
SDF4-205ENST00000465727 LINC00337Q8N6G1 96 aa14.05□□□□□ -0.16
SDF4-205ENST00000465727 IL17DQ8TAD2 202 aa14.05□□□□□ -0.16
SDF4-205ENST00000465727 SND1-IT1Q9HBX3 110 aa14.05□□□□□ -0.16
SDF4-205ENST00000465727 TENM4Q6N022 2769 aa14.05□□□□□ -0.16
SDF4-205ENST00000465727 SLURP1P55000 103 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms