RNA–Protein interactions for RNA: ENST00000465507.1

XRN1-205, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 322 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-205ENST00000465507 FAT2Q9NYQ8 4349 aa-0.21□□□□□ -2.44
XRN1-205ENST00000465507 ZNF236Q9UL36 1845 aa-0.21□□□□□ -2.44
XRN1-205ENST00000465507 F8VRH5 84 aa-0.21□□□□□ -2.44
XRN1-205ENST00000465507 DEFB109BQ30KR1 87 aa-0.21□□□□□ -2.44
XRN1-205ENST00000465507 TMEM170BQ5T4T1 132 aa-0.21□□□□□ -2.44
XRN1-205ENST00000465507 Q5VSD8 79 aa-0.21□□□□□ -2.44
XRN1-205ENST00000465507 C5orf38Q86SI9 138 aa-0.21□□□□□ -2.44
XRN1-205ENST00000465507 BAGE2Q86Y30 109 aa-0.21□□□□□ -2.44
XRN1-205ENST00000465507 C8orf59Q8N0T1 100 aaPredicted RBP-0.21□□□□□ -2.44
XRN1-205ENST00000465507 MGST2Q99735 147 aa-0.21□□□□□ -2.44
XRN1-205ENST00000465507 DYNLRB1Q9NP97 96 aa-0.21□□□□□ -2.44
XRN1-205ENST00000465507 LINC00474Q9P2X8 69 aa-0.21□□□□□ -2.44
XRN1-205ENST00000465507 LINC01558Q9Y6Z2 57 aa-0.21□□□□□ -2.44
XRN1-205ENST00000465507 LRP6O75581 1613 aa-0.21□□□□□ -2.44
XRN1-205ENST00000465507 SPTBN1Q01082 2364 aaKnown RBP-0.21□□□□□ -2.44
XRN1-205ENST00000465507 IGLC7A0M8Q6 106 aa-0.22□□□□□ -2.44
XRN1-205ENST00000465507 OOSP1A8MZH6 123 aa-0.22□□□□□ -2.44
XRN1-205ENST00000465507 I3L2K1 104 aa-0.22□□□□□ -2.44
XRN1-205ENST00000465507 HMGN4O00479 90 aa-0.22□□□□□ -2.44
XRN1-205ENST00000465507 UQCR11O14957 56 aa-0.22□□□□□ -2.44
XRN1-205ENST00000465507 AKAIN1P0CW23 69 aa-0.22□□□□□ -2.44
XRN1-205ENST00000465507 PP6455Q8WZ26 134 aa-0.22□□□□□ -2.44
XRN1-205ENST00000465507 TP53AIP1Q9HCN2 124 aa-0.22□□□□□ -2.44
XRN1-205ENST00000465507 ROCK2O75116 1388 aaKnown RBP-0.22□□□□□ -2.45
XRN1-205ENST00000465507 KDM3BQ7LBC6 1761 aa-0.22□□□□□ -2.45
XRN1-205ENST00000465507 GOLGA4Q13439 2230 aaKnown RBP-0.22□□□□□ -2.45
XRN1-205ENST00000465507 WNK3Q9BYP7 1800 aa-0.22□□□□□ -2.45
XRN1-205ENST00000465507 LRP2P98164 4655 aa-0.22□□□□□ -2.45
XRN1-205ENST00000465507 NAIPQ13075 1403 aa-0.22□□□□□ -2.45
XRN1-205ENST00000465507 MYH8P13535 1937 aa-0.23□□□□□ -2.45
XRN1-205ENST00000465507 SSSCA1O60232 199 aa-0.23□□□□□ -2.45
XRN1-205ENST00000465507 SPRR1AP35321 89 aa-0.23□□□□□ -2.45
XRN1-205ENST00000465507 COX17Q14061 63 aa-0.23□□□□□ -2.45
XRN1-205ENST00000465507 Q6JHZ5 121 aa-0.23□□□□□ -2.45
XRN1-205ENST00000465507 COMMD6Q7Z4G1 85 aa-0.23□□□□□ -2.45
XRN1-205ENST00000465507 BCL9LQ86UU0 1499 aa-0.23□□□□□ -2.45
XRN1-205ENST00000465507 GVINP1Q7Z2Y8 2422 aa-0.24□□□□□ -2.45
XRN1-205ENST00000465507 IFNGP01579 166 aa-0.24□□□□□ -2.45
XRN1-205ENST00000465507 S100A3P33764 101 aa-0.24□□□□□ -2.45
XRN1-205ENST00000465507 TPPP2P59282 170 aa-0.24□□□□□ -2.45
XRN1-205ENST00000465507 RPL13AP3Q6NVV1 102 aa-0.24□□□□□ -2.45
XRN1-205ENST00000465507 MYO7BQ6PIF6 2116 aa-0.24□□□□□ -2.45
XRN1-205ENST00000465507 ERCC6L2Q5T890 1561 aa-0.24□□□□□ -2.45
XRN1-205ENST00000465507 LRRC37A2A6NM11 1700 aa-0.24□□□□□ -2.45
XRN1-205ENST00000465507 A2ML1A8K2U0 1454 aa-0.25□□□□□ -2.45
XRN1-205ENST00000465507 MYH7P12883 1935 aa-0.25□□□□□ -2.45
XRN1-205ENST00000465507 C10orf71Q711Q0 1435 aa-0.26□□□□□ -2.45
XRN1-205ENST00000465507 A0A1B0GV90 55 aa-0.26□□□□□ -2.45
XRN1-205ENST00000465507 TNFP01375 233 aa-0.26□□□□□ -2.45
XRN1-205ENST00000465507 PRM1P04553 51 aa-0.26□□□□□ -2.45
XRN1-205ENST00000465507 MRPL54Q6P161 138 aaKnown RBP-0.26□□□□□ -2.45
XRN1-205ENST00000465507 DOCK2Q92608 1830 aa-0.27□□□□□ -2.45
XRN1-205ENST00000465507 PPRC1Q5VV67 1664 aaKnown RBP-0.27□□□□□ -2.45
XRN1-205ENST00000465507 RIMS1Q86UR5 1692 aaKnown RBP-0.27□□□□□ -2.45
XRN1-205ENST00000465507 FLNAP21333 2647 aaKnown RBP-0.27□□□□□ -2.45
XRN1-205ENST00000465507 LOC285095A0A1B0GVY8 99 aa-0.27□□□□□ -2.45
XRN1-205ENST00000465507 EFCAB10A6NFE3 127 aa-0.27□□□□□ -2.45
XRN1-205ENST00000465507 CHKB-CPT1BH3BT56 60 aa-0.27□□□□□ -2.45
XRN1-205ENST00000465507 SFT2D2O95562 160 aa-0.27□□□□□ -2.45
XRN1-205ENST00000465507 APOC3P02656 99 aa-0.27□□□□□ -2.45
XRN1-205ENST00000465507 SPRR2DP22532 72 aa-0.27□□□□□ -2.45
XRN1-205ENST00000465507 DPH3P1Q9H4G8 78 aa-0.27□□□□□ -2.45
XRN1-205ENST00000465507 CDC42SE2Q9NRR3 84 aa-0.27□□□□□ -2.45
XRN1-205ENST00000465507 ALMS1Q8TCU4 4167 aa-0.27□□□□□ -2.45
XRN1-205ENST00000465507 BSNQ9UPA5 3926 aa-0.27□□□□□ -2.45
XRN1-205ENST00000465507 QRICH2Q9H0J4 1663 aa-0.27□□□□□ -2.45
XRN1-205ENST00000465507 TRBV6-1A0A0K0K1D8 114 aa-0.28□□□□□ -2.45
XRN1-205ENST00000465507 DLEU1O43261 78 aa-0.28□□□□□ -2.45
XRN1-205ENST00000465507 DCDP81605 110 aaKnown RBP-0.28□□□□□ -2.45
XRN1-205ENST00000465507 C9orf153Q5TBE3 101 aa-0.28□□□□□ -2.45
XRN1-205ENST00000465507 MACF1Q9UPN3 7388 aaKnown RBP-0.28□□□□□ -2.45
XRN1-205ENST00000465507 TNXBP22105 4242 aa-0.28□□□□□ -2.45
XRN1-205ENST00000465507 DCHS2Q6V1P9 2916 aa-0.28□□□□□ -2.45
XRN1-205ENST00000465507 ZFHX3Q15911 3703 aa-0.28□□□□□ -2.45
XRN1-205ENST00000465507 PIEZO2Q9H5I5 2752 aa-0.28□□□□□ -2.46
XRN1-205ENST00000465507 KTN1Q86UP2 1357 aaKnown RBP-0.29□□□□□ -2.46
XRN1-205ENST00000465507 KIF21AQ7Z4S6 1674 aa-0.29□□□□□ -2.46
XRN1-205ENST00000465507 MYOZ3Q8TDC0 251 aa-0.29□□□□□ -2.46
XRN1-205ENST00000465507 SPRR4Q96PI1 79 aa-0.29□□□□□ -2.46
XRN1-205ENST00000465507 CSPG4Q6UVK1 2322 aa-0.29□□□□□ -2.46
XRN1-205ENST00000465507 NSD3Q9BZ95 1437 aa-0.3□□□□□ -2.46
XRN1-205ENST00000465507 ROBO1Q9Y6N7 1651 aa-0.3□□□□□ -2.46
XRN1-205ENST00000465507 STAB1Q9NY15 2570 aa-0.3□□□□□ -2.46
XRN1-205ENST00000465507 MAP1BP46821 2468 aaKnown RBP-0.3□□□□□ -2.46
XRN1-205ENST00000465507 FXYD6-FXYD2A0A087WZ82 144 aa-0.3□□□□□ -2.46
XRN1-205ENST00000465507 UBE2L5PA0A1B0GUS4 154 aa-0.3□□□□□ -2.46
XRN1-205ENST00000465507 IGLC1P0CG04 106 aa-0.3□□□□□ -2.46
XRN1-205ENST00000465507 UBE2L3P68036 154 aaKnown RBP-0.3□□□□□ -2.46
XRN1-205ENST00000465507 PIGYQ3MUY2 71 aa-0.3□□□□□ -2.46
XRN1-205ENST00000465507 NXT2Q9NPJ8 142 aaKnown RBP-0.3□□□□□ -2.46
XRN1-205ENST00000465507 IER3IP1Q9Y5U9 82 aa-0.3□□□□□ -2.46
XRN1-205ENST00000465507 HECTD4Q9Y4D8 3996 aa-0.3□□□□□ -2.46
XRN1-205ENST00000465507 ATRQ13535 2644 aa-0.31□□□□□ -2.46
XRN1-205ENST00000465507 PSME4Q14997 1843 aa-0.31□□□□□ -2.46
XRN1-205ENST00000465507 SNAPC5O75971 98 aa-0.31□□□□□ -2.46
XRN1-205ENST00000465507 TMEM263Q8WUH6 116 aaKnown RBP-0.31□□□□□ -2.46
XRN1-205ENST00000465507 SHANK2Q9UPX8 1470 aa-0.31□□□□□ -2.46
XRN1-205ENST00000465507 APC2O95996 2303 aa-0.31□□□□□ -2.46
XRN1-205ENST00000465507 SBF2Q86WG5 1849 aa-0.31□□□□□ -2.46
XRN1-205ENST00000465507 FAM24AA6NFZ4 105 aa-0.32□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms