RNA–Protein interactions for RNA: ENST00000465223.1

NCSTN-210, Transcript of nicastrin, humanhuman

TSL 2

Gene NCSTN, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-210ENST00000465223 TSHBP01222 138 aa8.64□□□□□ -1.03
NCSTN-210ENST00000465223 ESDP10768 282 aa8.64□□□□□ -1.03
NCSTN-210ENST00000465223 GAGE2EQ4V326 116 aa8.64□□□□□ -1.03
NCSTN-210ENST00000465223 LINC00304Q8N9R0 145 aa8.64□□□□□ -1.03
NCSTN-210ENST00000465223 GAGE2DQ9UEU5 116 aa8.64□□□□□ -1.03
NCSTN-210ENST00000465223 TNFSF18Q9UNG2 199 aa8.64□□□□□ -1.03
NCSTN-210ENST00000465223 NCR2O95944 276 aa8.63□□□□□ -1.03
NCSTN-210ENST00000465223 CFC1BP0CG36 223 aa8.63□□□□□ -1.03
NCSTN-210ENST00000465223 PET100P0DJ07 73 aa8.63□□□□□ -1.03
NCSTN-210ENST00000465223 SERF2P84101 59 aa8.63□□□□□ -1.03
NCSTN-210ENST00000465223 INMT-MINDY4F8WBC2 141 aa8.62□□□□□ -1.03
NCSTN-210ENST00000465223 IGLC6P0CF74 106 aa8.62□□□□□ -1.03
NCSTN-210ENST00000465223 SPAG11BQ08648 103 aa8.62□□□□□ -1.03
NCSTN-210ENST00000465223 GATD1Q8NB37 220 aa8.62□□□□□ -1.03
NCSTN-210ENST00000465223 RPL39LQ96EH5 51 aaKnown RBP8.62□□□□□ -1.03
NCSTN-210ENST00000465223 CTXND1A0A1B0GTU2 59 aa8.61□□□□□ -1.03
NCSTN-210ENST00000465223 FAM240BA0A1B0GVZ2 78 aa8.61□□□□□ -1.03
NCSTN-210ENST00000465223 C10orf25Q5T742 122 aa8.61□□□□□ -1.03
NCSTN-210ENST00000465223 C5orf38Q86SI9 138 aa8.61□□□□□ -1.03
NCSTN-210ENST00000465223 OR2D3Q8NGH3 330 aa8.61□□□□□ -1.03
NCSTN-210ENST00000465223 STOML3Q8TAV4 291 aa8.61□□□□□ -1.03
NCSTN-210ENST00000465223 CDC42SE2Q9NRR3 84 aa8.61□□□□□ -1.03
NCSTN-210ENST00000465223 MRPL35Q9NZE8 188 aaKnown RBP8.61□□□□□ -1.03
NCSTN-210ENST00000465223 G3V3Q6 166 aa8.6□□□□□ -1.03
NCSTN-210ENST00000465223 KRTAP10-6P60371 365 aaPredicted RBP8.6□□□□□ -1.03
NCSTN-210ENST00000465223 KRTAP19-2Q3LHN2 52 aa8.6□□□□□ -1.03
NCSTN-210ENST00000465223 CST9LP1Q5W188 147 aa8.6□□□□□ -1.03
NCSTN-210ENST00000465223 BAGE2Q86Y30 109 aa8.6□□□□□ -1.03
NCSTN-210ENST00000465223 LINC00337Q8N6G1 96 aa8.6□□□□□ -1.03
NCSTN-210ENST00000465223 IMMP2LQ96T52 175 aa8.6□□□□□ -1.03
NCSTN-210ENST00000465223 TRGC1P0CF51 173 aa8.59□□□□□ -1.03
NCSTN-210ENST00000465223 CTDSP1Q9GZU7 261 aa8.59□□□□□ -1.03
NCSTN-210ENST00000465223 TLX1NBP0CAT3 122 aa8.58□□□□□ -1.04
NCSTN-210ENST00000465223 MZT2BQ6NZ67 158 aa8.58□□□□□ -1.04
NCSTN-210ENST00000465223 SEC61BP60468 96 aaKnown RBP8.57□□□□□ -1.04
NCSTN-210ENST00000465223 SMDT1Q9H4I9 107 aa8.57□□□□□ -1.04
NCSTN-210ENST00000465223 C6orf48Q9UBA6 75 aa8.57□□□□□ -1.04
NCSTN-210ENST00000465223 SDHAF1A6NFY7 115 aa8.56□□□□□ -1.04
NCSTN-210ENST00000465223 C1orf196B1AJZ1 125 aa8.56□□□□□ -1.04
NCSTN-210ENST00000465223 FHITP49789 147 aa8.56□□□□□ -1.04
NCSTN-210ENST00000465223 KRTAP13-3Q3SY46 172 aa8.56□□□□□ -1.04
NCSTN-210ENST00000465223 UNQ6190/PRO20217Q6UXQ8 127 aa8.56□□□□□ -1.04
NCSTN-210ENST00000465223 TCEAL7Q9BRU2 100 aa8.56□□□□□ -1.04
NCSTN-210ENST00000465223 NUPR1O60356 82 aa8.55□□□□□ -1.04
NCSTN-210ENST00000465223 RNASE13Q5GAN3 156 aaKnown RBP8.55□□□□□ -1.04
NCSTN-210ENST00000465223 LYZL1Q6UWQ5 148 aa8.55□□□□□ -1.04
NCSTN-210ENST00000465223 CCDC32Q9BV29 185 aa8.55□□□□□ -1.04
NCSTN-210ENST00000465223 ALG5Q9Y673 324 aa8.55□□□□□ -1.04
NCSTN-210ENST00000465223 NDUFA1O15239 70 aa8.54□□□□□ -1.04
NCSTN-210ENST00000465223 S100A9P06702 114 aaKnown RBP8.54□□□□□ -1.04
NCSTN-210ENST00000465223 PMCHP20382 165 aa8.54□□□□□ -1.04
NCSTN-210ENST00000465223 C9orf129Q5T035 196 aaKnown RBP8.54□□□□□ -1.04
NCSTN-210ENST00000465223 MRPL52Q86TS9 123 aaKnown RBP8.54□□□□□ -1.04
NCSTN-210ENST00000465223 ORAOV1Q8WV07 137 aa8.54□□□□□ -1.04
NCSTN-210ENST00000465223 TRAV13-1A0A0B4J241 112 aa8.53□□□□□ -1.04
NCSTN-210ENST00000465223 MAP1LC3B2A6NCE7 125 aa8.53□□□□□ -1.04
NCSTN-210ENST00000465223 I3L3M4 83 aa8.53□□□□□ -1.04
NCSTN-210ENST00000465223 PAGE4O60829 102 aa8.53□□□□□ -1.04
NCSTN-210ENST00000465223 OR10D4PQ8NGN7 298 aa8.53□□□□□ -1.04
NCSTN-210ENST00000465223 MRAP2Q96G30 205 aa8.53□□□□□ -1.04
NCSTN-210ENST00000465223 MAP1LC3BQ9GZQ8 125 aa8.53□□□□□ -1.04
NCSTN-210ENST00000465223 TMEM242Q9NWH2 141 aa8.53□□□□□ -1.04
NCSTN-210ENST00000465223 RPL28P46779 137 aaKnown RBP8.52□□□□□ -1.05
NCSTN-210ENST00000465223 LINC00242Q5T6M2 205 aa8.52□□□□□ -1.05
NCSTN-210ENST00000465223 F2Z2F3 143 aa8.51□□□□□ -1.05
NCSTN-210ENST00000465223 RPS20P60866 119 aaKnown RBP8.51□□□□□ -1.05
NCSTN-210ENST00000465223 TMEM241Q24JQ0 296 aa8.51□□□□□ -1.05
NCSTN-210ENST00000465223 TWIST1Q15672 202 aa8.5□□□□□ -1.05
NCSTN-210ENST00000465223 RPL7L1Q6DKI1 246 aaKnown RBP8.5□□□□□ -1.05
NCSTN-210ENST00000465223 F8WDY8 70 aa8.49□□□□□ -1.05
NCSTN-210ENST00000465223 SSNA1O43805 119 aa8.49□□□□□ -1.05
NCSTN-210ENST00000465223 CTRLP40313 264 aa8.49□□□□□ -1.05
NCSTN-210ENST00000465223 FOXA3P55318 350 aaPredicted RBP8.49□□□□□ -1.05
NCSTN-210ENST00000465223 RNASE7Q9H1E1 156 aaKnown RBP8.49□□□□□ -1.05
NCSTN-210ENST00000465223 C22orf24Q9Y442 160 aa8.49□□□□□ -1.05
NCSTN-210ENST00000465223 FAM229BQ4G0N7 80 aa8.48□□□□□ -1.05
NCSTN-210ENST00000465223 AKR1C8PQ5T2L2 129 aa8.48□□□□□ -1.05
NCSTN-210ENST00000465223 TMUB2Q71RG4 321 aa8.48□□□□□ -1.05
NCSTN-210ENST00000465223 FP248Q71RG6 208 aaPredicted RBP8.48□□□□□ -1.05
NCSTN-210ENST00000465223 ENKURQ8TC29 256 aa8.48□□□□□ -1.05
NCSTN-210ENST00000465223 SSPOA2VEC9 5147 aa8.47□□□□□ -1.05
NCSTN-210ENST00000465223 IGKV2D-26A0A0A0MRZ7 120 aa8.47□□□□□ -1.05
NCSTN-210ENST00000465223 BCE1O60756 84 aa8.47□□□□□ -1.05
NCSTN-210ENST00000465223 CTAG1AP78358 180 aa8.47□□□□□ -1.05
NCSTN-210ENST00000465223 C7orf77A4D0Y5 90 aa8.46□□□□□ -1.06
NCSTN-210ENST00000465223 IFNA1P01562 189 aa8.46□□□□□ -1.06
NCSTN-210ENST00000465223 RPL35P42766 123 aaKnown RBP8.46□□□□□ -1.06
NCSTN-210ENST00000465223 Q6ZUT4 128 aa8.45□□□□□ -1.06
NCSTN-210ENST00000465223 C9orf62Q8N4C0 152 aa8.45□□□□□ -1.06
NCSTN-210ENST00000465223 TRBV6-5A0A0K0K1A5 114 aa8.44□□□□□ -1.06
NCSTN-210ENST00000465223 NDUFC2-KCTD14E9PQ53 114 aa8.44□□□□□ -1.06
NCSTN-210ENST00000465223 UBE2D4Q9Y2X8 147 aa8.44□□□□□ -1.06
NCSTN-210ENST00000465223 USH2AO75445 5202 aa8.43□□□□□ -1.06
NCSTN-210ENST00000465223 A0A1B0GV50 99 aa8.43□□□□□ -1.06
NCSTN-210ENST00000465223 XKRY2A2RUG3 117 aa8.43□□□□□ -1.06
NCSTN-210ENST00000465223 PFDN1O60925 122 aa8.43□□□□□ -1.06
NCSTN-210ENST00000465223 LBHQ53QV2 105 aaPredicted RBP8.43□□□□□ -1.06
NCSTN-210ENST00000465223 CYTL1Q9NRR1 136 aa8.43□□□□□ -1.06
NCSTN-210ENST00000465223 CENPWQ5EE01 88 aa8.42□□□□□ -1.06
NCSTN-210ENST00000465223 C2orf82Q6UX34 121 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms