RNA–Protein interactions for RNA: ENST00000465143.1

ITSN1-223, Transcript of intersectin 1, human

TSL 3

Gene ITSN1, Length 614 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-223	ENST00000465143	COTL1	Q14019	142 aa		5.28	□□□□□ -1.56
ITSN1-223	ENST00000465143	MRPL23	Q16540	153 aa	Known RBP	5.28	□□□□□ -1.56
ITSN1-223	ENST00000465143	ESRG	Q1W209	222 aa		5.28	□□□□□ -1.56
ITSN1-223	ENST00000465143	C1orf134	Q5TEV5	83 aa		5.28	□□□□□ -1.56
ITSN1-223	ENST00000465143	LINC00336	Q6ZUF6	198 aa		5.28	□□□□□ -1.56
ITSN1-223	ENST00000465143	LINC00173	Q6ZV60	143 aa		5.28	□□□□□ -1.56
ITSN1-223	ENST00000465143	OR10D4P	Q8NGN7	298 aa		5.28	□□□□□ -1.56
ITSN1-223	ENST00000465143	PACRG	Q96M98	296 aa	Predicted RBP	5.28	□□□□□ -1.56
ITSN1-223	ENST00000465143	NBDY	A0A0U1RRE5	68 aa		5.27	□□□□□ -1.57
ITSN1-223	ENST00000465143	AKR1D1	P51857	326 aa		5.27	□□□□□ -1.57
ITSN1-223	ENST00000465143	NTM-AS1	Q6ZSK4	140 aa		5.27	□□□□□ -1.57
ITSN1-223	ENST00000465143	ATP6V0E2	Q8NHE4	81 aa		5.27	□□□□□ -1.57
ITSN1-223	ENST00000465143	CHCHD7	Q9BUK0	85 aa		5.27	□□□□□ -1.57
ITSN1-223	ENST00000465143		Q9H8V8	135 aa		5.27	□□□□□ -1.57
ITSN1-223	ENST00000465143	MRPS16	Q9Y3D3	137 aa	Known RBP	5.27	□□□□□ -1.57
ITSN1-223	ENST00000465143	EPPK1	P58107	5090 aa	Known RBP	5.27	□□□□□ -1.57
ITSN1-223	ENST00000465143	BIRC6	Q9NR09	4857 aa		5.27	□□□□□ -1.57
ITSN1-223	ENST00000465143	PRSS29P	A6NIE9	313 aa		5.26	□□□□□ -1.57
ITSN1-223	ENST00000465143	LEPROTL1	O95214	131 aa		5.26	□□□□□ -1.57
ITSN1-223	ENST00000465143	G0S2	P27469	103 aa		5.26	□□□□□ -1.57
ITSN1-223	ENST00000465143	RPL39	P62891	51 aa	Known RBP	5.26	□□□□□ -1.57
ITSN1-223	ENST00000465143	TTC32	Q5I0X7	151 aa		5.26	□□□□□ -1.57
ITSN1-223	ENST00000465143	C2orf66	Q6UXQ4	117 aa		5.26	□□□□□ -1.57
ITSN1-223	ENST00000465143		Q6ZR54	194 aa		5.26	□□□□□ -1.57
ITSN1-223	ENST00000465143	TOMM6	Q96B49	74 aa		5.26	□□□□□ -1.57
ITSN1-223	ENST00000465143	UPK3B	Q9BT76	320 aa		5.26	□□□□□ -1.57
ITSN1-223	ENST00000465143	GTSF1L	Q9H1H1	148 aa		5.26	□□□□□ -1.57
ITSN1-223	ENST00000465143	HSPB8	Q9UJY1	196 aa		5.26	□□□□□ -1.57
ITSN1-223	ENST00000465143	CYSLTR1	Q9Y271	337 aa		5.26	□□□□□ -1.57
ITSN1-223	ENST00000465143	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	5.25	□□□□□ -1.57
ITSN1-223	ENST00000465143	IGKV2-29	A2NJV5	120 aa	Predicted RBP	5.25	□□□□□ -1.57
ITSN1-223	ENST00000465143	KRTDAP	P60985	99 aa		5.25	□□□□□ -1.57
ITSN1-223	ENST00000465143	LYPD5	Q6UWN5	251 aa		5.25	□□□□□ -1.57
ITSN1-223	ENST00000465143	SH2D6	Q7Z4S9	175 aa		5.25	□□□□□ -1.57
ITSN1-223	ENST00000465143	C6orf223	Q8N319	242 aa		5.25	□□□□□ -1.57
ITSN1-223	ENST00000465143	C20orf203	Q8NBC4	194 aa		5.25	□□□□□ -1.57
ITSN1-223	ENST00000465143	IFI27L1	Q96BM0	104 aa		5.25	□□□□□ -1.57
ITSN1-223	ENST00000465143	SCGB3A1	Q96QR1	104 aa		5.25	□□□□□ -1.57
ITSN1-223	ENST00000465143	KMT2A	Q03164	3969 aa		5.25	□□□□□ -1.57
ITSN1-223	ENST00000465143	TRBV25-1	A0A075B6N4	114 aa		5.24	□□□□□ -1.57
ITSN1-223	ENST00000465143	TRBV6-8	A0A0A6YYG3	113 aa		5.24	□□□□□ -1.57
ITSN1-223	ENST00000465143	RTL8C	O15255	209 aa		5.24	□□□□□ -1.57
ITSN1-223	ENST00000465143	SIVA1	O15304	175 aa		5.24	□□□□□ -1.57
ITSN1-223	ENST00000465143	ATP5L	O75964	103 aa		5.24	□□□□□ -1.57
ITSN1-223	ENST00000465143	C3orf79	P0CE67	100 aa		5.24	□□□□□ -1.57
ITSN1-223	ENST00000465143	TMEM97	Q5BJF2	176 aa		5.24	□□□□□ -1.57
ITSN1-223	ENST00000465143	TMEM243	Q9BU79	118 aa		5.24	□□□□□ -1.57
ITSN1-223	ENST00000465143	VPS13D	Q5THJ4	4388 aa		5.24	□□□□□ -1.57
ITSN1-223	ENST00000465143	TRAV9-2	A0A087WT02	112 aa		5.23	□□□□□ -1.57
ITSN1-223	ENST00000465143	LINC01549	A6NIU2	74 aa		5.23	□□□□□ -1.57
ITSN1-223	ENST00000465143	IGIP	A6NJ69	53 aa		5.23	□□□□□ -1.57
ITSN1-223	ENST00000465143		H0Y8G0	127 aa		5.23	□□□□□ -1.57
ITSN1-223	ENST00000465143	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	5.23	□□□□□ -1.57
ITSN1-223	ENST00000465143	ERAS	Q7Z444	233 aa		5.23	□□□□□ -1.57
ITSN1-223	ENST00000465143	SPATA12	Q7Z6I5	190 aa		5.23	□□□□□ -1.57
ITSN1-223	ENST00000465143	MAP1LC3C	Q9BXW4	147 aa		5.23	□□□□□ -1.57
ITSN1-223	ENST00000465143	TRAV8-6	A0A0B4J262	113 aa		5.22	□□□□□ -1.57
ITSN1-223	ENST00000465143	SYS1-DBNDD2	H3BUS1	97 aa		5.22	□□□□□ -1.57
ITSN1-223	ENST00000465143	UBE2L6	O14933	153 aa		5.22	□□□□□ -1.57
ITSN1-223	ENST00000465143	PRSS1	P07477	247 aa		5.22	□□□□□ -1.57
ITSN1-223	ENST00000465143	FGF6	P10767	208 aa		5.22	□□□□□ -1.57
ITSN1-223	ENST00000465143	GAGE6	Q13070	117 aa		5.22	□□□□□ -1.57
ITSN1-223	ENST00000465143		Q6ZN92	141 aa		5.22	□□□□□ -1.57
ITSN1-223	ENST00000465143	TMEM141	Q96I45	108 aa		5.22	□□□□□ -1.57
ITSN1-223	ENST00000465143	TIMM17A	Q99595	171 aa		5.22	□□□□□ -1.57
ITSN1-223	ENST00000465143	OPRPN	Q99935	248 aa	Predicted RBP	5.22	□□□□□ -1.57
ITSN1-223	ENST00000465143	CHCHD5	Q9BSY4	110 aa		5.22	□□□□□ -1.57
ITSN1-223	ENST00000465143	SPANXA1	Q9NS26	97 aa		5.22	□□□□□ -1.57
ITSN1-223	ENST00000465143	UBE2D4	Q9Y2X8	147 aa		5.22	□□□□□ -1.57
ITSN1-223	ENST00000465143	PYGO1	Q9Y3Y4	419 aa		5.22	□□□□□ -1.57
ITSN1-223	ENST00000465143	IGLV4-3	A0A075B6K6	122 aa		5.21	□□□□□ -1.58
ITSN1-223	ENST00000465143		H7C423	109 aa		5.21	□□□□□ -1.58
ITSN1-223	ENST00000465143	SCGB1D1	O95968	90 aa		5.21	□□□□□ -1.58
ITSN1-223	ENST00000465143	TIRAP	P58753	221 aa		5.21	□□□□□ -1.58
ITSN1-223	ENST00000465143	JOSD1	Q15040	202 aa	Predicted RBP	5.21	□□□□□ -1.58
ITSN1-223	ENST00000465143	LELP1	Q5T871	98 aa		5.21	□□□□□ -1.58
ITSN1-223	ENST00000465143	ZC2HC1B	Q5TFG8	222 aa		5.21	□□□□□ -1.58
ITSN1-223	ENST00000465143	AMMECR1L	Q6DCA0	310 aa		5.21	□□□□□ -1.58
ITSN1-223	ENST00000465143	PET117	Q6UWS5	81 aa		5.21	□□□□□ -1.58
ITSN1-223	ENST00000465143	MRPL52	Q86TS9	123 aa	Known RBP	5.21	□□□□□ -1.58
ITSN1-223	ENST00000465143		Q8N976	141 aa		5.21	□□□□□ -1.58
ITSN1-223	ENST00000465143	BAALC	Q8WXS3	180 aa		5.21	□□□□□ -1.58
ITSN1-223	ENST00000465143	TIMM21	Q9BVV7	248 aa		5.21	□□□□□ -1.58
ITSN1-223	ENST00000465143	C20orf202	A1L168	122 aa		5.2	□□□□□ -1.58
ITSN1-223	ENST00000465143	TMEM262	E9PQX1	116 aa		5.2	□□□□□ -1.58
ITSN1-223	ENST00000465143	SMAGP	Q0VAQ4	97 aa		5.2	□□□□□ -1.58
ITSN1-223	ENST00000465143	RNASE13	Q5GAN3	156 aa	Known RBP	5.2	□□□□□ -1.58
ITSN1-223	ENST00000465143	PYY3	Q5JQD4	70 aa		5.2	□□□□□ -1.58
ITSN1-223	ENST00000465143	LINC01545	Q5VT33	79 aa		5.2	□□□□□ -1.58
ITSN1-223	ENST00000465143	DGAT2L7P	Q6IED9	249 aa		5.2	□□□□□ -1.58
ITSN1-223	ENST00000465143		Q6ZUT4	128 aa		5.2	□□□□□ -1.58
ITSN1-223	ENST00000465143	WFDC10B	Q8IUB3	73 aa		5.2	□□□□□ -1.58
ITSN1-223	ENST00000465143	OR5A1	Q8NGJ0	315 aa		5.2	□□□□□ -1.58
ITSN1-223	ENST00000465143	FAM104A	Q969W3	186 aa		5.2	□□□□□ -1.58
ITSN1-223	ENST00000465143	TMEM101	Q96IK0	257 aa		5.2	□□□□□ -1.58
ITSN1-223	ENST00000465143	PMCHL2	Q9BQD1	86 aa		5.2	□□□□□ -1.58
ITSN1-223	ENST00000465143	KRTAP1-5	Q9BYS1	174 aa		5.2	□□□□□ -1.58
ITSN1-223	ENST00000465143	VCX2	Q9H322	139 aa		5.2	□□□□□ -1.58
ITSN1-223	ENST00000465143	DNAH10	Q8IVF4	4471 aa		5.19	□□□□□ -1.58
ITSN1-223	ENST00000465143	IGLV4-60	A0A075B6I1	120 aa		5.19	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms