RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 TTC9CQ8N5M4 171 aa-0.3□□□□□ -2.46
NUCKS1-202ENST00000464938 NAA60Q9H7X0 242 aa-0.3□□□□□ -2.46
NUCKS1-202ENST00000464938 NPVFQ9HCQ7 196 aa-0.3□□□□□ -2.46
NUCKS1-202ENST00000464938 V9GYH0 126 aa-0.3□□□□□ -2.46
NUCKS1-202ENST00000464938 PKD1L1Q8TDX9 2849 aa-0.3□□□□□ -2.46
NUCKS1-202ENST00000464938 MYOM1P52179 1685 aa-0.3□□□□□ -2.46
NUCKS1-202ENST00000464938 PAPPAQ13219 1627 aa-0.31□□□□□ -2.46
NUCKS1-202ENST00000464938 CTXND1A0A1B0GTU2 59 aa-0.31□□□□□ -2.46
NUCKS1-202ENST00000464938 GNG7O60262 68 aa-0.31□□□□□ -2.46
NUCKS1-202ENST00000464938 MEIG1Q5JSS6 88 aa-0.31□□□□□ -2.46
NUCKS1-202ENST00000464938 GVINP1Q7Z2Y8 2422 aa-0.31□□□□□ -2.46
NUCKS1-202ENST00000464938 FLNAP21333 2647 aaKnown RBP-0.31□□□□□ -2.46
NUCKS1-202ENST00000464938 MYH8P13535 1937 aa-0.31□□□□□ -2.46
NUCKS1-202ENST00000464938 SPTBN1Q01082 2364 aaKnown RBP-0.31□□□□□ -2.46
NUCKS1-202ENST00000464938 DOCK2Q92608 1830 aa-0.31□□□□□ -2.46
NUCKS1-202ENST00000464938 PRKDCP78527 4128 aaKnown RBP-0.32□□□□□ -2.46
NUCKS1-202ENST00000464938 ARHGEF5Q12774 1597 aa-0.32□□□□□ -2.46
NUCKS1-202ENST00000464938 PI4KAP42356 2102 aa-0.32□□□□□ -2.46
NUCKS1-202ENST00000464938 PLCE1Q9P212 2302 aa-0.32□□□□□ -2.46
NUCKS1-202ENST00000464938 A2ML1A8K2U0 1454 aa-0.32□□□□□ -2.46
NUCKS1-202ENST00000464938 TRBV7-3A0A075B6L6 115 aa-0.32□□□□□ -2.46
NUCKS1-202ENST00000464938 LOC100130705A0A1B0GUX0 176 aa-0.32□□□□□ -2.46
NUCKS1-202ENST00000464938 UQCR11O14957 56 aa-0.32□□□□□ -2.46
NUCKS1-202ENST00000464938 HAMPP81172 84 aa-0.32□□□□□ -2.46
NUCKS1-202ENST00000464938 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.32□□□□□ -2.46
NUCKS1-202ENST00000464938 SPANXDQ9BXN6 97 aa-0.32□□□□□ -2.46
NUCKS1-202ENST00000464938 SBF2Q86WG5 1849 aa-0.32□□□□□ -2.46
NUCKS1-202ENST00000464938 ZFHX3Q15911 3703 aa-0.32□□□□□ -2.46
NUCKS1-202ENST00000464938 USF3Q68DE3 2245 aa-0.33□□□□□ -2.46
NUCKS1-202ENST00000464938 RAPGEF6Q8TEU7 1601 aa-0.33□□□□□ -2.46
NUCKS1-202ENST00000464938 F8VRH5 84 aa-0.33□□□□□ -2.46
NUCKS1-202ENST00000464938 HMGN1P05114 100 aa-0.33□□□□□ -2.46
NUCKS1-202ENST00000464938 FGF7P21781 194 aa-0.33□□□□□ -2.46
NUCKS1-202ENST00000464938 CCDC58Q4VC31 144 aa-0.33□□□□□ -2.46
NUCKS1-202ENST00000464938 Q56UQ5 140 aa-0.33□□□□□ -2.46
NUCKS1-202ENST00000464938 Q6JHZ5 121 aa-0.33□□□□□ -2.46
NUCKS1-202ENST00000464938 C5orf38Q86SI9 138 aa-0.33□□□□□ -2.46
NUCKS1-202ENST00000464938 BAGE2Q86Y30 109 aa-0.33□□□□□ -2.46
NUCKS1-202ENST00000464938 TSLPQ969D9 159 aa-0.33□□□□□ -2.46
NUCKS1-202ENST00000464938 PPP3R2Q96LZ3 170 aa-0.33□□□□□ -2.46
NUCKS1-202ENST00000464938 MGST2Q99735 147 aa-0.33□□□□□ -2.46
NUCKS1-202ENST00000464938 DYNLRB1Q9NP97 96 aa-0.33□□□□□ -2.46
NUCKS1-202ENST00000464938 LINC01558Q9Y6Z2 57 aa-0.33□□□□□ -2.46
NUCKS1-202ENST00000464938 PIEZO2Q9H5I5 2752 aa-0.33□□□□□ -2.46
NUCKS1-202ENST00000464938 ROBO1Q9Y6N7 1651 aa-0.33□□□□□ -2.46
NUCKS1-202ENST00000464938 MUC2Q02817 5179 aa-0.34□□□□□ -2.46
NUCKS1-202ENST00000464938 TRBV6-1A0A0K0K1D8 114 aa-0.34□□□□□ -2.46
NUCKS1-202ENST00000464938 IGLC7A0M8Q6 106 aa-0.34□□□□□ -2.46
NUCKS1-202ENST00000464938 MIF4GDA9UHW6 222 aaKnown RBP-0.34□□□□□ -2.46
NUCKS1-202ENST00000464938 FAM25AB3EWG3 89 aa-0.34□□□□□ -2.46
NUCKS1-202ENST00000464938 FAM25CB3EWG5 89 aa-0.34□□□□□ -2.46
NUCKS1-202ENST00000464938 FAM25GB3EWG6 89 aa-0.34□□□□□ -2.46
NUCKS1-202ENST00000464938 HMGN4O00479 90 aa-0.34□□□□□ -2.46
NUCKS1-202ENST00000464938 TPPP2P59282 170 aa-0.34□□□□□ -2.46
NUCKS1-202ENST00000464938 TMEM170BQ5T4T1 132 aa-0.34□□□□□ -2.46
NUCKS1-202ENST00000464938 COMMD6Q7Z4G1 85 aa-0.34□□□□□ -2.46
NUCKS1-202ENST00000464938 SMG6Q86US8 1419 aaKnown RBP-0.34□□□□□ -2.46
NUCKS1-202ENST00000464938 DEFB123Q8N688 67 aa-0.34□□□□□ -2.46
NUCKS1-202ENST00000464938 C1orf54Q8WWF1 131 aa-0.34□□□□□ -2.46
NUCKS1-202ENST00000464938 NSD3Q9BZ95 1437 aa-0.34□□□□□ -2.46
NUCKS1-202ENST00000464938 MYO7BQ6PIF6 2116 aa-0.34□□□□□ -2.46
NUCKS1-202ENST00000464938 TULP4Q9NRJ4 1543 aa-0.34□□□□□ -2.46
NUCKS1-202ENST00000464938 NAIPQ13075 1403 aa-0.35□□□□□ -2.47
NUCKS1-202ENST00000464938 SSSCA1O60232 199 aa-0.35□□□□□ -2.47
NUCKS1-202ENST00000464938 S100A3P33764 101 aa-0.35□□□□□ -2.47
NUCKS1-202ENST00000464938 DCDP81605 110 aaKnown RBP-0.35□□□□□ -2.47
NUCKS1-202ENST00000464938 CATR1Q13166 79 aa-0.35□□□□□ -2.47
NUCKS1-202ENST00000464938 LINC00474Q9P2X8 69 aa-0.35□□□□□ -2.47
NUCKS1-202ENST00000464938 ZANQ9Y493 2812 aa-0.36□□□□□ -2.47
NUCKS1-202ENST00000464938 EP300Q09472 2414 aaPredicted RBP-0.36□□□□□ -2.47
NUCKS1-202ENST00000464938 CUL7Q14999 1698 aa-0.36□□□□□ -2.47
NUCKS1-202ENST00000464938 APOC2P02655 101 aa-0.36□□□□□ -2.47
NUCKS1-202ENST00000464938 APOC3P02656 99 aa-0.36□□□□□ -2.47
NUCKS1-202ENST00000464938 SPRR2BP35325 72 aa-0.36□□□□□ -2.47
NUCKS1-202ENST00000464938 C8orf59Q8N0T1 100 aaPredicted RBP-0.36□□□□□ -2.47
NUCKS1-202ENST00000464938 SPRR4Q96PI1 79 aa-0.36□□□□□ -2.47
NUCKS1-202ENST00000464938 FAM107BQ9H098 131 aa-0.36□□□□□ -2.47
NUCKS1-202ENST00000464938 CDC42SE2Q9NRR3 84 aa-0.36□□□□□ -2.47
NUCKS1-202ENST00000464938 SHANK2Q9UPX8 1470 aa-0.36□□□□□ -2.47
NUCKS1-202ENST00000464938 WDR7Q9Y4E6 1490 aa-0.36□□□□□ -2.47
NUCKS1-202ENST00000464938 MYH7P12883 1935 aa-0.36□□□□□ -2.47
NUCKS1-202ENST00000464938 HMGXB3Q12766 1538 aa-0.37□□□□□ -2.47
NUCKS1-202ENST00000464938 ATRQ13535 2644 aa-0.37□□□□□ -2.47
NUCKS1-202ENST00000464938 NALCNQ8IZF0 1738 aa-0.37□□□□□ -2.47
NUCKS1-202ENST00000464938 LOC285095A0A1B0GVY8 99 aa-0.37□□□□□ -2.47
NUCKS1-202ENST00000464938 OOSP1A8MZH6 123 aa-0.37□□□□□ -2.47
NUCKS1-202ENST00000464938 SFT2D2O95562 160 aa-0.37□□□□□ -2.47
NUCKS1-202ENST00000464938 TNFP01375 233 aa-0.37□□□□□ -2.47
NUCKS1-202ENST00000464938 PIGYQ3MUY2 71 aa-0.37□□□□□ -2.47
NUCKS1-202ENST00000464938 MYOZ3Q8TDC0 251 aa-0.37□□□□□ -2.47
NUCKS1-202ENST00000464938 PP6455Q8WZ26 134 aa-0.37□□□□□ -2.47
NUCKS1-202ENST00000464938 TSC22D3Q99576 134 aa-0.37□□□□□ -2.47
NUCKS1-202ENST00000464938 GAPVD1Q14C86 1478 aa-0.37□□□□□ -2.47
NUCKS1-202ENST00000464938 DSTQ03001 7570 aaKnown RBP-0.37□□□□□ -2.47
NUCKS1-202ENST00000464938 TENM2Q9NT68 2774 aa-0.37□□□□□ -2.47
NUCKS1-202ENST00000464938 DIP2CQ9Y2E4 1556 aa-0.37□□□□□ -2.47
NUCKS1-202ENST00000464938 APC2O95996 2303 aa-0.37□□□□□ -2.47
NUCKS1-202ENST00000464938 CSPG4Q6UVK1 2322 aa-0.37□□□□□ -2.47
NUCKS1-202ENST00000464938 TET3O43151 1660 aa-0.37□□□□□ -2.47
NUCKS1-202ENST00000464938 SPTA1P02549 2419 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms